RNA–Protein interactions for RNA: ENST00000531768.1

RSF1-210, Transcript of remodeling and spacing factor 1, human

TSL 2

Gene RSF1, Length 626 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RSF1-210	ENST00000531768	TET1	Q8NFU7	2136 aa		0.23	□□□□□ -2.37
RSF1-210	ENST00000531768	CACNA1A	O00555	2505 aa		0.23	□□□□□ -2.37
RSF1-210	ENST00000531768	LAMA4	Q16363	1823 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	USP24	Q9UPU5	2620 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	MUC4	Q99102	2169 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	LAMB4	A4D0S4	1761 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	ROCK1	Q13464	1354 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	PKD1L2	Q7Z442	2459 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	FANCM	Q8IYD8	2048 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768		A0A087WSZ3	146 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	TRAV1-1	A0A0B4J248	108 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	TRAV5	A0A0B4J249	113 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	ATP5H	O75947	161 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	DHFR	P00374	187 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	SMIM17	P0DL12	118 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	SRP14	P37108	136 aa	Known RBP	0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	SSR2	P43308	183 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	ATP5G3	P48201	142 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	CNBP	P62633	177 aa	Known RBP	0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	UBE2B	P63146	152 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	DYNLT1	P63172	113 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	MYL5	Q02045	173 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	PRB3	Q04118	309 aa	Predicted RBP	0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	KRR1	Q13601	381 aa	Known RBP	0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	POU6F1	Q14863	301 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	SURF2	Q15527	256 aa	Predicted RBP	0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	C1orf137	Q5JT78	98 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	BRMS1L	Q5PSV4	323 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	BCL2L15	Q5TBC7	163 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	TMED4	Q7Z7H5	227 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	FAM19A2	Q8N3H0	131 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	C15orf53	Q8NAA6	179 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	SLC30A7	Q8NEW0	376 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	OR52R1	Q8NGF1	315 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	WFDC5	Q8TCV5	224 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	SLAMF6	Q96DU3	332 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	ODF3	Q96PU9	254 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	GPER1	Q99527	375 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	PHB2	Q99623	299 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	PAIP2	Q9BPZ3	127 aa	Known RBP	0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	PRADC1	Q9BSG0	188 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	TMEM70	Q9BUB7	260 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	C9orf16	Q9BUW7	83 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	PBOV1	Q9GZY1	135 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	TMEM126A	Q9H061	195 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	SH3BGRL3	Q9H299	93 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	BCL2L10	Q9HD36	194 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	LYRM2	Q9NU23	88 aa	Predicted RBP	0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	OPTC	Q9UBM4	332 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	STOML2	Q9UJZ1	356 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	KLK9	Q9UKQ9	250 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	FAM32A	Q9Y421	112 aa	Known RBP	0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	ANKRD31	Q8N7Z5	1873 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	NUP210	Q8TEM1	1887 aa	Predicted RBP	0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	MYO5A	Q9Y4I1	1855 aa	Known RBP	0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	CAMSAP2	Q08AD1	1489 aa		0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	N4BP2	Q86UW6	1770 aa	Predicted RBP	0.22	□□□□□ -2.37
RSF1-210	ENST00000531768	UHRF1BP1	Q6BDS2	1440 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	MIA2	Q96PC5	1412 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	YTHDC2	Q9H6S0	1430 aa	Known RBP	0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	ZDBF2	Q9HCK1	2354 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	COL24A1	Q17RW2	1714 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	TANC2	Q9HCD6	1990 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	KNTC1	P50748	2209 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	PTPRD	P23468	1912 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	SYNM	O15061	1565 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	TRBV6-7	A0A0A0MS04	114 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	TRBV6-8	A0A0A6YYG3	113 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	DUXB	A0A1W2PPF3	345 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	C1orf196	B1AJZ1	125 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	ZNF736	B4DX44	427 aa	Predicted RBP	0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	CLDN25	C9JDP6	229 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768		E7EUB6	86 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	C17orf112	F2Z3M2	114 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768		H7C1C5	153 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768		M0R378	163 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	TAX1BP3	O14907	124 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	HMGB3	O15347	200 aa	Known RBP	0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	NDUFB3	O43676	98 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	TIMM17B	O60830	172 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	PIAS1	O75925	651 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	ATG12	O94817	140 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	NDUFC2	O95298	119 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	IFNA1	P01562	189 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	APOA2	P02652	100 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	MGST1	P10620	155 aa	Known RBP	0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	HLA-E	P13747	358 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	SRI	P30626	198 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	PHB	P35232	272 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	DSCR4	P56555	118 aa	Predicted RBP	0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	DEFA1	P59665	94 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	ROMO1	P60602	79 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	NCALD	P61601	193 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	LCN6	P62502	163 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	RHOB	P62745	196 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	RPL19	P84098	196 aa	Known RBP	0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	TAF1A	Q15573	450 aa	Predicted RBP	0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	MPV17L	Q2QL34	196 aa		0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	RNASE10	Q5GAN6	216 aa	Known RBP	0.21	□□□□□ -2.38
RSF1-210	ENST00000531768	AKR1C8P	Q5T2L2	129 aa		0.21	□□□□□ -2.38

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms