RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 HIST1H2BHQ93079 126 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 DPH3Q96FX2 82 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 RNF185Q96GF1 192 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 CCL13Q99616 98 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 HIST1H2BNQ99877 126 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 HIST1H2BMQ99879 126 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 C11orf68Q9H3H3 251 aaKnown RBP2.29□□□□□ -2.04
PTPRK-220ENST00000531466 ZNF702PQ9H963 129 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 NPVFQ9HCQ7 196 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 SLC39A9Q9NUM3 307 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 PLXND1Q9Y4D7 1925 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 FOCADQ5VW36 1801 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 EFCAB5A4FU69 1503 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 LRRC9Q6ZRR7 1453 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 CDK12Q9NYV4 1490 aaPredicted RBP2.28□□□□□ -2.04
PTPRK-220ENST00000531466 TRBV20-1A0A075B6N2 111 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 A0A087WWC5 75 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 IGHV7-81A0A0B4J1V7 117 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 IGHV1-69DA0A0B4J2H0 117 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 FAM24AA6NFZ4 105 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 HMSDA8MTL9 139 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 IGLL5B9A064 214 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 M0R381 172 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 SSSCA1O60232 199 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 PROSCO94903 275 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 TRACP01848 142 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 HLA-DQB1P01920 261 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 LINC00869P0C866 280 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 IGLL1P15814 213 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 RPS10P46783 165 aaKnown RBP2.28□□□□□ -2.04
PTPRK-220ENST00000531466 POLR2JP52435 117 aaKnown RBP2.28□□□□□ -2.04
PTPRK-220ENST00000531466 MRPS36P82909 103 aaKnown RBP2.28□□□□□ -2.04
PTPRK-220ENST00000531466 DIAPH2-AS1Q14236 149 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 CXCL17Q6UXB2 119 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 MDP1Q86V88 176 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 KRTAP13-1Q8IUC0 172 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 TMEM75Q8N9X5 138 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 OR1J4Q8NGS1 313 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 TSLPQ969D9 159 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 CARD19Q96LW7 228 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 TM2D3Q9BRN9 247 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 ST20Q9HBF5 79 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 FAM60AQ9NP50 221 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 CACFD1Q9UGQ2 172 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 COQ4Q9Y3A0 265 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 SERP1Q9Y6X1 66 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 MYO10Q9HD67 2058 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 MYH3P11055 1940 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 DENND4AQ7Z401 1863 aa2.28□□□□□ -2.04
PTPRK-220ENST00000531466 QRICH2Q9H0J4 1663 aa2.28□□□□□ -2.05
PTPRK-220ENST00000531466 SHROOM2Q13796 1616 aa2.28□□□□□ -2.05
PTPRK-220ENST00000531466 DISP1Q96F81 1524 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 ARHGEF12Q9NZN5 1544 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 ATP10BO94823 1461 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 ATP7BP35670 1465 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 ADAMTS13Q76LX8 1427 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 XIRP1Q702N8 1843 aaKnown RBP2.27□□□□□ -2.05
PTPRK-220ENST00000531466 IGHV3OR16-13A0A075B7E8 117 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 A0A0G2JRQ6 117 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 TRBV27A0A0K0K1C4 114 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 A0A1W2PP18 115 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 C7orf66A4D0T2 115 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF727A8MUV8 499 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF705FA8MVS1 300 aaPredicted RBP2.27□□□□□ -2.05
PTPRK-220ENST00000531466 H3BMG7 143 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 H3BRM9 83 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 K7N7A8 449 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 LST1O00453 97 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 COX7A2LO14548 114 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 SOCS1O15524 211 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 YPEL1O60688 119 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF324O75467 553 aaPredicted RBP2.27□□□□□ -2.05
PTPRK-220ENST00000531466 NDUFB6O95139 128 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 UBL3O95164 117 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 SHBGP04278 402 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 GYPBP06028 91 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF705DP0CH99 300 aaPredicted RBP2.27□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF705BP0CI00 300 aaPredicted RBP2.27□□□□□ -2.05
PTPRK-220ENST00000531466 IGLC2P0DOY2 106 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 IGLC3P0DOY3 106 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 HLA-DRB4P13762 266 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 S100A4P26447 101 aaKnown RBP2.27□□□□□ -2.05
PTPRK-220ENST00000531466 VDAC2P45880 294 aaPredicted RBP2.27□□□□□ -2.05
PTPRK-220ENST00000531466 KLK7P49862 253 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 ATP5EP56381 51 aaPredicted RBP2.27□□□□□ -2.05
PTPRK-220ENST00000531466 TAS2R45P59539 299 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 UBE2BP63146 152 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 ELOCQ15369 112 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 PMCHL1Q16048 86 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 LGALSLQ3ZCW2 172 aaPredicted RBP2.27□□□□□ -2.05
PTPRK-220ENST00000531466 C6orf99Q4VX62 202 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 LCA10Q71F78 164 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 LINC00596Q86U02 117 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 BPIFA4PQ86YQ2 179 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 C6orf223Q8N319 242 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 RNF182Q8N6D2 247 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 OR5H2Q8NGV7 314 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 VSTM2AQ8TAG5 236 aa2.27□□□□□ -2.05
PTPRK-220ENST00000531466 CHCHD10Q8WYQ3 142 aaPredicted RBP2.27□□□□□ -2.05
PTPRK-220ENST00000531466 FXYD5Q96DB9 178 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms