RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ZNF320A2RRD8 509 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 FAM231BA6NCW3 169 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 K7EIM0 57 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 K7EQM0 130 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 TOX4O94842 621 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 IGKV1-17P01599 117 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 HLA-DQA1P01909 254 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 REG1AP05451 166 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 RD3LP0DJH9 198 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 GP9P14770 177 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 TMEM11P17152 192 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 ORM2P19652 201 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 GNLYP22749 145 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 GATA2P23769 480 aaPredicted RBP4.39□□□□□ -1.71
PCF11-205ENST00000530906 CNTFRP26992 372 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 MFAP4P55083 255 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 RPL15P61313 204 aaKnown RBP4.39□□□□□ -1.71
PCF11-205ENST00000530906 LMO4P61968 165 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 UBE2G1P62253 170 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 CX3CL1P78423 397 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 ZNF90Q03938 601 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 HES1Q14469 280 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 ZNF329Q86UD4 541 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 BPIFA4PQ86YQ2 179 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 NECAP1Q8NC96 275 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 OR4F17Q8NGA8 305 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 OR1B1Q8NGR6 318 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 VN1R17PQ8TDU5 208 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 WIPF2Q8TF74 440 aaPredicted RBP4.39□□□□□ -1.71
PCF11-205ENST00000530906 TMEM18Q96B42 140 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 PACRGQ96M98 296 aaPredicted RBP4.39□□□□□ -1.71
PCF11-205ENST00000530906 GPR82Q96P67 336 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 PIMREGQ9BSJ6 248 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 SHANK2-AS3Q9BTD1 123 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 ELOVL1Q9BW60 279 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 GNB1LQ9BYB4 327 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 MRPL27Q9P0M9 148 aaKnown RBP4.39□□□□□ -1.71
PCF11-205ENST00000530906 ZNF492Q9P255 531 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 EPDR1Q9UM22 224 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 HILPDAQ9Y5L2 63 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 TRAPPC1Q9Y5R8 145 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 V9GYV3 84 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 PIEZO1Q92508 2521 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 NAV3Q8IVL0 2385 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 CFAP47Q6ZTR5 3102 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 A0A1W2PPR1 153 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 WI2-2373I1.2A0A1W2PRP0 233 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 SMIM27A0A1W2PRY6 76 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 XKRY2A2RUG3 117 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 H3BRN7 92 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 K7EN84 100 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 FCN1O00602 326 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 GNG7O60262 68 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 ZNF253O75346 499 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 LY6HO94772 140 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 NDUFB8O95169 186 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 SLC25A5P05141 298 aaKnown RBP4.38□□□□□ -1.71
PCF11-205ENST00000530906 PSG1P11464 419 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 PAX1P15863 534 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 GATA3P23771 443 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 CDKN1AP38936 164 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 LDLRAD2Q5SZI1 272 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 IBA57Q5T440 356 aaKnown RBP4.38□□□□□ -1.71
PCF11-205ENST00000530906 CYB5R2Q6BCY4 276 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 ATP5L2Q7Z4Y8 100 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 BAGE2Q86Y30 109 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 OR5T1Q8NG75 326 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 OR5R1Q8NH85 324 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 FAM110DQ8TAY7 271 aaPredicted RBP4.38□□□□□ -1.71
PCF11-205ENST00000530906 SLC25A39Q9BZJ4 359 aaPredicted RBP4.38□□□□□ -1.71
PCF11-205ENST00000530906 GFRA4Q9GZZ7 299 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 CDIP1Q9H305 208 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 C21orf62Q9NYP8 219 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 MRPL36Q9P0J6 103 aaKnown RBP4.38□□□□□ -1.71
PCF11-205ENST00000530906 CACNA1AO00555 2505 aa4.38□□□□□ -1.71
PCF11-205ENST00000530906 SPTBN4Q9H254 2564 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 BOD1L1Q8NFC6 3051 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 TRAV5A0A0B4J249 113 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 A0A1W2PRD5 423 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 A0A1W2PRF3 423 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 A0A1W2PRM7 423 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 IZUMO1RA6ND01 250 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 NCBP2LA6PVI3 153 aaKnown RBP4.37□□□□□ -1.71
PCF11-205ENST00000530906 A8MWL6 223 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 M0QZK8 103 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 NPFFO15130 113 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 GATCO43716 136 aaKnown RBP4.37□□□□□ -1.71
PCF11-205ENST00000530906 BRI3O95415 125 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 LTAP01374 205 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 IGLV2-8P01709 118 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 IGHV4-39P01824 125 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 TCRAP04437 139 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 PYYP10082 97 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 ESDP10768 282 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 RPL7P18124 248 aaKnown RBP4.37□□□□□ -1.71
PCF11-205ENST00000530906 ZFP36P26651 326 aaKnown RBP4.37□□□□□ -1.71
PCF11-205ENST00000530906 CRIP2P52943 208 aaPredicted RBP4.37□□□□□ -1.71
PCF11-205ENST00000530906 LYZP61626 148 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 RANP62826 216 aaKnown RBP4.37□□□□□ -1.71
PCF11-205ENST00000530906 PAX8Q06710 450 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms