RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	GPR6	P46095	362 aa	Predicted RBP	18.62	■□□□□ 0.57
GSDMD-208	ENST00000528475	RBPJ	Q06330	500 aa		18.62	■□□□□ 0.57
GSDMD-208	ENST00000528475	IGHV3-21	A0A0B4J1V1	117 aa		18.61	■□□□□ 0.57
GSDMD-208	ENST00000528475	TRBV6-1	A0A0K0K1D8	114 aa		18.61	■□□□□ 0.57
GSDMD-208	ENST00000528475		I3L2K1	104 aa		18.61	■□□□□ 0.57
GSDMD-208	ENST00000528475		M0R2Z0	102 aa		18.61	■□□□□ 0.57
GSDMD-208	ENST00000528475	PSG1	P11464	419 aa		18.61	■□□□□ 0.57
GSDMD-208	ENST00000528475	GTSF1	Q8WW33	167 aa		18.61	■□□□□ 0.57
GSDMD-208	ENST00000528475	LPAR2	Q9HBW0	351 aa		18.61	■□□□□ 0.57
GSDMD-208	ENST00000528475	ASPM	Q8IZT6	3477 aa		18.61	■□□□□ 0.57
GSDMD-208	ENST00000528475	DLEU1	O43261	78 aa		18.61	■□□□□ 0.57
GSDMD-208	ENST00000528475	APELA	P0DMC3	54 aa		18.61	■□□□□ 0.57
GSDMD-208	ENST00000528475	SRSF12	Q8WXF0	261 aa	Known RBP	18.61	■□□□□ 0.57
GSDMD-208	ENST00000528475	TMEM208	Q9BTX3	173 aa		18.61	■□□□□ 0.57
GSDMD-208	ENST00000528475	CD3E	P07766	207 aa		18.6	■□□□□ 0.57
GSDMD-208	ENST00000528475	HOXB4	P17483	251 aa	Predicted RBP	18.6	■□□□□ 0.57
GSDMD-208	ENST00000528475	COL5A1-AS1	Q5SY13	56 aa		18.6	■□□□□ 0.57
GSDMD-208	ENST00000528475	LEMD1	Q68G75	181 aa		18.6	■□□□□ 0.57
GSDMD-208	ENST00000528475		Q86TA4	180 aa		18.6	■□□□□ 0.57
GSDMD-208	ENST00000528475	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	18.6	■□□□□ 0.57
GSDMD-208	ENST00000528475	WNT10A	Q9GZT5	417 aa		18.6	■□□□□ 0.57
GSDMD-208	ENST00000528475	C20orf202	A1L168	122 aa		18.59	■□□□□ 0.57
GSDMD-208	ENST00000528475	BTF3	P20290	206 aa	Known RBP	18.59	■□□□□ 0.57
GSDMD-208	ENST00000528475	EBLN2	Q6P2I7	272 aa		18.59	■□□□□ 0.57
GSDMD-208	ENST00000528475	RNASEK	Q6P5S7	137 aa	Known RBP	18.59	■□□□□ 0.57
GSDMD-208	ENST00000528475	RBPMS2	Q6ZRY4	209 aa	Known RBP	18.59	■□□□□ 0.57
GSDMD-208	ENST00000528475	OR2D3	Q8NGH3	330 aa		18.59	■□□□□ 0.57
GSDMD-208	ENST00000528475	DAZAP1	Q96EP5	407 aa	Known RBP	18.59	■□□□□ 0.57
GSDMD-208	ENST00000528475	FBXL15	Q9H469	300 aa		18.59	■□□□□ 0.57
GSDMD-208	ENST00000528475	GSX1	Q9H4S2	264 aa	Predicted RBP	18.59	■□□□□ 0.57
GSDMD-208	ENST00000528475	C2orf70	A6NJV1	201 aa		18.59	■□□□□ 0.57
GSDMD-208	ENST00000528475	LY6L	H3BQJ8	138 aa		18.59	■□□□□ 0.57
GSDMD-208	ENST00000528475	LYZ	P61626	148 aa		18.59	■□□□□ 0.57
GSDMD-208	ENST00000528475	RPE	Q96AT9	228 aa		18.59	■□□□□ 0.57
GSDMD-208	ENST00000528475	URB1-AS1	Q96HZ7	61 aa		18.59	■□□□□ 0.57
GSDMD-208	ENST00000528475	SCNM1	Q9BWG6	230 aa		18.59	■□□□□ 0.57
GSDMD-208	ENST00000528475	ZGRF1	Q86YA3	2104 aa		18.58	■□□□□ 0.57
GSDMD-208	ENST00000528475	DLX1	P56177	255 aa		18.58	■□□□□ 0.57
GSDMD-208	ENST00000528475	C16orf54	Q6UWD8	224 aa		18.58	■□□□□ 0.57
GSDMD-208	ENST00000528475	PLXNB1	O43157	2135 aa		18.58	■□□□□ 0.56
GSDMD-208	ENST00000528475		A6NNC1	897 aa		18.58	■□□□□ 0.56
GSDMD-208	ENST00000528475	AKAP13	Q12802	2813 aa		18.57	■□□□□ 0.56
GSDMD-208	ENST00000528475	PPIAL4C	A0A0B4J2A2	164 aa		18.57	■□□□□ 0.56
GSDMD-208	ENST00000528475	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	18.57	■□□□□ 0.56
GSDMD-208	ENST00000528475		H3BTX0	84 aa		18.57	■□□□□ 0.56
GSDMD-208	ENST00000528475	PPIAL4G	P0DN37	164 aa		18.57	■□□□□ 0.56
GSDMD-208	ENST00000528475	CHCHD1	Q96BP2	118 aa	Known RBP	18.57	■□□□□ 0.56
GSDMD-208	ENST00000528475	TXN2	Q99757	166 aa		18.57	■□□□□ 0.56
GSDMD-208	ENST00000528475	RASL11B	Q9BPW5	248 aa		18.57	■□□□□ 0.56
GSDMD-208	ENST00000528475	IGLV2-11	P01706	119 aa		18.56	■□□□□ 0.56
GSDMD-208	ENST00000528475	HNRNPA3	P51991	378 aa	Known RBP	18.56	■□□□□ 0.56
GSDMD-208	ENST00000528475	NHLH1	Q02575	133 aa		18.56	■□□□□ 0.56
GSDMD-208	ENST00000528475	LCN12	Q6JVE5	192 aa		18.56	■□□□□ 0.56
GSDMD-208	ENST00000528475		Q6ZN92	141 aa		18.56	■□□□□ 0.56
GSDMD-208	ENST00000528475	PGLYRP4	Q96LB8	373 aa		18.56	■□□□□ 0.56
GSDMD-208	ENST00000528475	TRAV9-2	A0A087WT02	112 aa		18.56	■□□□□ 0.56
GSDMD-208	ENST00000528475	BATF	Q16520	125 aa		18.56	■□□□□ 0.56
GSDMD-208	ENST00000528475	VKORC1	Q9BQB6	163 aa		18.56	■□□□□ 0.56
GSDMD-208	ENST00000528475	C1RL	Q9NZP8	487 aa		18.56	■□□□□ 0.56
GSDMD-208	ENST00000528475	RNF24	Q9Y225	148 aa		18.56	■□□□□ 0.56
GSDMD-208	ENST00000528475	RP1L1	Q8IWN7	2480 aa	Predicted RBP	18.55	■□□□□ 0.56
GSDMD-208	ENST00000528475	IGKV1-17	P01599	117 aa		18.55	■□□□□ 0.56
GSDMD-208	ENST00000528475	PTPRZ1	P23471	2315 aa	Predicted RBP	18.55	■□□□□ 0.56
GSDMD-208	ENST00000528475	BOD1L1	Q8NFC6	3051 aa		18.55	■□□□□ 0.56
GSDMD-208	ENST00000528475	COX7A1	P24310	79 aa		18.54	■□□□□ 0.56
GSDMD-208	ENST00000528475	FOXA3	P55318	350 aa	Predicted RBP	18.54	■□□□□ 0.56
GSDMD-208	ENST00000528475	DMRTA1	Q5VZB9	504 aa		18.54	■□□□□ 0.56
GSDMD-208	ENST00000528475	NDFIP1	Q9BT67	221 aa		18.54	■□□□□ 0.56
GSDMD-208	ENST00000528475	PRR30	Q53SZ7	412 aa	Predicted RBP	18.54	■□□□□ 0.56
GSDMD-208	ENST00000528475	FAM120AOS	Q5T036	256 aa		18.54	■□□□□ 0.56
GSDMD-208	ENST00000528475	CYB5R2	Q6BCY4	276 aa		18.54	■□□□□ 0.56
GSDMD-208	ENST00000528475	SHANK2-AS3	Q9BTD1	123 aa		18.54	■□□□□ 0.56
GSDMD-208	ENST00000528475	LAMTOR2	Q9Y2Q5	125 aa		18.54	■□□□□ 0.56
GSDMD-208	ENST00000528475	MRPS16	Q9Y3D3	137 aa	Known RBP	18.54	■□□□□ 0.56
GSDMD-208	ENST00000528475	GOLT1B	Q9Y3E0	138 aa		18.54	■□□□□ 0.56
GSDMD-208	ENST00000528475	MALRD1	Q5VYJ5	2156 aa		18.53	■□□□□ 0.56
GSDMD-208	ENST00000528475	LYNX1	G3V0Z9	82 aa		18.53	■□□□□ 0.56
GSDMD-208	ENST00000528475	HAX1	O00165	279 aa		18.53	■□□□□ 0.56
GSDMD-208	ENST00000528475	LYNX1	P0DP58	116 aa		18.53	■□□□□ 0.56
GSDMD-208	ENST00000528475	COL8A1	P27658	744 aa		18.53	■□□□□ 0.56
GSDMD-208	ENST00000528475	PRB3	Q04118	309 aa	Predicted RBP	18.53	■□□□□ 0.56
GSDMD-208	ENST00000528475		H3BRN7	92 aa		18.53	■□□□□ 0.56
GSDMD-208	ENST00000528475		K7EIM0	57 aa		18.53	■□□□□ 0.56
GSDMD-208	ENST00000528475	CRX	O43186	299 aa	Predicted RBP	18.53	■□□□□ 0.56
GSDMD-208	ENST00000528475	APOH	P02749	345 aa	Predicted RBP	18.53	■□□□□ 0.56
GSDMD-208	ENST00000528475	ATOH7	Q8N100	152 aa		18.53	■□□□□ 0.56
GSDMD-208	ENST00000528475	LY6G5B	Q8NDX9	201 aa		18.53	■□□□□ 0.56
GSDMD-208	ENST00000528475	PLGLA	Q15195	96 aa		18.52	■□□□□ 0.56
GSDMD-208	ENST00000528475		Q56UQ5	140 aa		18.52	■□□□□ 0.56
GSDMD-208	ENST00000528475	GOLT1A	Q6ZVE7	132 aa		18.52	■□□□□ 0.56
GSDMD-208	ENST00000528475	LYPD1	Q8N2G4	141 aa		18.52	■□□□□ 0.56
GSDMD-208	ENST00000528475	EXOC3-AS1	Q8N2X6	119 aa		18.52	■□□□□ 0.56
GSDMD-208	ENST00000528475	CIART	Q8N365	385 aa	Predicted RBP	18.52	■□□□□ 0.56
GSDMD-208	ENST00000528475	TMEM75	Q8N9X5	138 aa		18.52	■□□□□ 0.56
GSDMD-208	ENST00000528475	TMEM70	Q9BUB7	260 aa		18.52	■□□□□ 0.56
GSDMD-208	ENST00000528475	ROS1	P08922	2347 aa		18.52	■□□□□ 0.56
GSDMD-208	ENST00000528475	TRBV19	A0A075B6N1	114 aa		18.51	■□□□□ 0.55
GSDMD-208	ENST00000528475	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	18.51	■□□□□ 0.55
GSDMD-208	ENST00000528475	TRAV8-1	A0A0A6YYK1	113 aa		18.51	■□□□□ 0.55
GSDMD-208	ENST00000528475	BPIFA4P	Q86YQ2	179 aa		18.51	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms