RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 KRASP01116 189 aa9.03□□□□□ -0.96
VPS11-202ENST00000526829 CT45A6P0DMU7 189 aa9.03□□□□□ -0.96
VPS11-202ENST00000526829 CT45A5P0DMU8 189 aa9.03□□□□□ -0.96
VPS11-202ENST00000526829 CT45A7P0DMV0 189 aa9.03□□□□□ -0.96
VPS11-202ENST00000526829 PPP1CBP62140 327 aa9.03□□□□□ -0.96
VPS11-202ENST00000526829 HBG1P69891 147 aa9.03□□□□□ -0.96
VPS11-202ENST00000526829 HBG2P69892 147 aa9.03□□□□□ -0.96
VPS11-202ENST00000526829 CT45A1Q5HYN5 189 aa9.03□□□□□ -0.96
VPS11-202ENST00000526829 CT45A3Q8NHU0 189 aa9.03□□□□□ -0.96
VPS11-202ENST00000526829 SLC25A10Q9UBX3 287 aaPredicted RBP9.03□□□□□ -0.96
VPS11-202ENST00000526829 DUSP13Q9UII6 198 aa9.03□□□□□ -0.96
VPS11-202ENST00000526829 METRNQ9UJH8 293 aa9.03□□□□□ -0.96
VPS11-202ENST00000526829 SIRPB1O00241 398 aa9.02□□□□□ -0.97
VPS11-202ENST00000526829 FCN3O75636 299 aa9.02□□□□□ -0.97
VPS11-202ENST00000526829 NHLRC4P0CG21 123 aaPredicted RBP9.02□□□□□ -0.97
VPS11-202ENST00000526829 HTR1DP28221 377 aa9.02□□□□□ -0.97
VPS11-202ENST00000526829 EDDM3AQ14507 147 aa9.02□□□□□ -0.97
VPS11-202ENST00000526829 Q6ZPA2 131 aa9.02□□□□□ -0.97
VPS11-202ENST00000526829 ZNF818PQ6ZRF7 136 aa9.02□□□□□ -0.97
VPS11-202ENST00000526829 GAPTQ8N292 157 aa9.02□□□□□ -0.97
VPS11-202ENST00000526829 TEX29Q8N6K0 151 aa9.02□□□□□ -0.97
VPS11-202ENST00000526829 SPANXCQ9NY87 97 aa9.02□□□□□ -0.97
VPS11-202ENST00000526829 IGKV1-27A0A075B6S5 117 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 KBTBD11-OT1A0A1B0GTJ5 212 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 A0A1B0GX51 115 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 ZNF785A8K8V0 405 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 LYNX1G3V0Z9 82 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 J3KT08 172 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 LYNX1P0DP58 116 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 RSPO1Q2MKA7 263 aaPredicted RBP9.01□□□□□ -0.97
VPS11-202ENST00000526829 PIGYQ3MUY2 71 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 FOXL2NBQ6ZUU3 175 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 FAM19A5Q7Z5A7 132 aaPredicted RBP9.01□□□□□ -0.97
VPS11-202ENST00000526829 Q8N976 141 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 TMEM54Q969K7 222 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 KIAA2026Q5HYC2 2103 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 CTXND1A0A1B0GTU2 59 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 TINCRA0A1B0GVN0 87 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 DIRC3C9JPN6 131 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 M0R135 149 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 DLX6P56179 175 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 PSG7Q13046 419 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 FFAR4Q5NUL3 377 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 OR2K2Q8NGT1 345 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 ZNRF2Q8NHG8 242 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 TAF15Q92804 592 aaKnown RBP eCLIP9.01□□□□□ -0.97
VPS11-202ENST00000526829 SPTSSAQ969W0 71 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 BORCS8Q96FH0 119 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 ZNF799Q96GE5 643 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 ST20Q9HBF5 79 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 HES4Q9HCC6 221 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 PSENENQ9NZ42 101 aa9.01□□□□□ -0.97
VPS11-202ENST00000526829 IGKV1-12A0A0C4DH73 117 aa9□□□□□ -0.97
VPS11-202ENST00000526829 CD300LBA8K4G0 201 aa9□□□□□ -0.97
VPS11-202ENST00000526829 H3BP45 60 aa9□□□□□ -0.97
VPS11-202ENST00000526829 SYNGR2O43760 224 aa9□□□□□ -0.97
VPS11-202ENST00000526829 NXPH3O95157 252 aa9□□□□□ -0.97
VPS11-202ENST00000526829 IGKV1D-12P01611 117 aa9□□□□□ -0.97
VPS11-202ENST00000526829 RPL7P18124 248 aaKnown RBP9□□□□□ -0.97
VPS11-202ENST00000526829 NTF3P20783 257 aa9□□□□□ -0.97
VPS11-202ENST00000526829 RBM11P57052 281 aaKnown RBP9□□□□□ -0.97
VPS11-202ENST00000526829 ARL16Q0P5N6 197 aa9□□□□□ -0.97
VPS11-202ENST00000526829 MSMPQ1L6U9 139 aa9□□□□□ -0.97
VPS11-202ENST00000526829 TBC1D28Q2M2D7 210 aa9□□□□□ -0.97
VPS11-202ENST00000526829 C10orf128Q5T292 105 aa9□□□□□ -0.97
VPS11-202ENST00000526829 HAPLN4Q86UW8 402 aa9□□□□□ -0.97
VPS11-202ENST00000526829 RPP25LQ8N5L8 163 aaKnown RBP9□□□□□ -0.97
VPS11-202ENST00000526829 Q8TCH9 128 aa9□□□□□ -0.97
VPS11-202ENST00000526829 AP1S3Q96PC3 154 aa9□□□□□ -0.97
VPS11-202ENST00000526829 FZR1Q9UM11 496 aa9□□□□□ -0.97
VPS11-202ENST00000526829 TRAV9-1A0A075B6T8 112 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 C7orf71A4D174 169 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 FAM231BA6NCW3 169 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 FAM90A10PA6NDY2 464 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 FAM90A18PA6NE21 464 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 FAM90A16PA6NEW6 464 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 C9orf118A6NHY6 69 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 FAM90A20PA6NIJ5 464 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 FAM90A8PA6NJQ4 464 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 FAM90A7PA6NKC0 464 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 FAM90A22PA8MWA6 464 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 FAM90A12PA8MX19 464 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 FAM90A5PA8MXJ8 464 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 FAM90A23PA8MXZ1 464 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 PGLYRP1O75594 196 aaPredicted RBP8.99□□□□□ -0.97
VPS11-202ENST00000526829 FAM90A15PP0C7V4 464 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 FAM90A13PP0C7W8 464 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 FAM90A14PP0C7W9 464 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 FAM90A24PP0C7X0 464 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 COL8A2P25067 703 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 ADMP35318 185 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 RPS28P62857 69 aaKnown RBP8.99□□□□□ -0.97
VPS11-202ENST00000526829 CATR1Q13166 79 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 KLRD1Q13241 179 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 MSMO1Q15800 293 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 PRR31Q5SQ13 230 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 LSM10Q969L4 123 aaKnown RBP8.99□□□□□ -0.97
VPS11-202ENST00000526829 OR4C12Q96R67 309 aa8.99□□□□□ -0.97
VPS11-202ENST00000526829 NAA38Q9BRA0 125 aaKnown RBP8.99□□□□□ -0.97
VPS11-202ENST00000526829 GGTLC1Q9BX51 225 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms