RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 NDUFB8O95169 186 aa12.49□□□□□ -0.41
USH1C-204ENST00000526313 PAX1P15863 534 aa12.49□□□□□ -0.41
USH1C-204ENST00000526313 ATP5J2P56134 94 aa12.49□□□□□ -0.41
USH1C-204ENST00000526313 CLEC2AQ6UVW9 174 aa12.49□□□□□ -0.41
USH1C-204ENST00000526313 RNF125Q96EQ8 232 aa12.49□□□□□ -0.41
USH1C-204ENST00000526313 ZNF586Q9NXT0 402 aa12.49□□□□□ -0.41
USH1C-204ENST00000526313 C21orf62Q9NYP8 219 aa12.49□□□□□ -0.41
USH1C-204ENST00000526313 GNG7O60262 68 aa12.49□□□□□ -0.41
USH1C-204ENST00000526313 GFI1BQ5VTD9 330 aa12.49□□□□□ -0.41
USH1C-204ENST00000526313 FAM231DQ6ZW35 169 aa12.49□□□□□ -0.41
USH1C-204ENST00000526313 C5orf17Q8NAS9 161 aa12.49□□□□□ -0.41
USH1C-204ENST00000526313 FAM110DQ8TAY7 271 aaPredicted RBP12.49□□□□□ -0.41
USH1C-204ENST00000526313 SMIM12Q96EX1 92 aa12.49□□□□□ -0.41
USH1C-204ENST00000526313 TXN2Q99757 166 aa12.49□□□□□ -0.41
USH1C-204ENST00000526313 IGHV4-30-2A0A087WSY4 118 aa12.48□□□□□ -0.41
USH1C-204ENST00000526313 IGHV1-69DA0A0B4J2H0 117 aa12.48□□□□□ -0.41
USH1C-204ENST00000526313 MRPS12O15235 138 aaKnown RBP12.48□□□□□ -0.41
USH1C-204ENST00000526313 IGHV1-69P01742 117 aa12.48□□□□□ -0.41
USH1C-204ENST00000526313 SLC25A5P05141 298 aaKnown RBP12.48□□□□□ -0.41
USH1C-204ENST00000526313 SNRPCP09234 159 aaKnown RBP12.48□□□□□ -0.41
USH1C-204ENST00000526313 HIST1H1BP16401 226 aaKnown RBP12.48□□□□□ -0.41
USH1C-204ENST00000526313 RPEL1Q2QD12 228 aa12.48□□□□□ -0.41
USH1C-204ENST00000526313 BAGE2Q86Y30 109 aa12.48□□□□□ -0.41
USH1C-204ENST00000526313 RNASE7Q9H1E1 156 aaKnown RBP12.48□□□□□ -0.41
USH1C-204ENST00000526313 Q9H3A6 140 aa12.48□□□□□ -0.41
USH1C-204ENST00000526313 GNG5P63218 68 aa12.47□□□□□ -0.41
USH1C-204ENST00000526313 VN1R17PQ8TDU5 208 aa12.47□□□□□ -0.41
USH1C-204ENST00000526313 ATG101Q9BSB4 218 aa12.47□□□□□ -0.41
USH1C-204ENST00000526313 MEGF9Q9H1U4 602 aa12.47□□□□□ -0.41
USH1C-204ENST00000526313 C7orf69Q9H7B7 122 aa12.47□□□□□ -0.41
USH1C-204ENST00000526313 OTORQ9NRC9 128 aa12.47□□□□□ -0.41
USH1C-204ENST00000526313 GAR1Q9NY12 217 aaKnown RBP12.47□□□□□ -0.41
USH1C-204ENST00000526313 RNF24Q9Y225 148 aa12.47□□□□□ -0.41
USH1C-204ENST00000526313 TRAV34A0A0B4J273 112 aa12.47□□□□□ -0.41
USH1C-204ENST00000526313 PRB1P04280 392 aa12.47□□□□□ -0.41
USH1C-204ENST00000526313 IGLC2P0DOY2 106 aa12.47□□□□□ -0.41
USH1C-204ENST00000526313 IBA57Q5T440 356 aaKnown RBP12.47□□□□□ -0.41
USH1C-204ENST00000526313 PIFOQ8TCI5 191 aa12.47□□□□□ -0.41
USH1C-204ENST00000526313 MLST8Q9BVC4 326 aa12.47□□□□□ -0.41
USH1C-204ENST00000526313 S4R3C0 116 aa12.47□□□□□ -0.41
USH1C-204ENST00000526313 SMIM27A0A1W2PRY6 76 aa12.46□□□□□ -0.41
USH1C-204ENST00000526313 OR2J3O76001 311 aa12.46□□□□□ -0.41
USH1C-204ENST00000526313 IL4P05112 153 aa12.46□□□□□ -0.41
USH1C-204ENST00000526313 C5orf56Q8N8D9 126 aa12.46□□□□□ -0.41
USH1C-204ENST00000526313 GPR61Q9BZJ8 451 aa12.46□□□□□ -0.41
USH1C-204ENST00000526313 TRAPPC1Q9Y5R8 145 aa12.46□□□□□ -0.41
USH1C-204ENST00000526313 TRBV9A0A0B4J1U6 114 aa12.46□□□□□ -0.42
USH1C-204ENST00000526313 TCRAP04437 139 aa12.46□□□□□ -0.42
USH1C-204ENST00000526313 CTSGP08311 255 aa12.46□□□□□ -0.42
USH1C-204ENST00000526313 USF2Q15853 346 aaPredicted RBP12.46□□□□□ -0.42
USH1C-204ENST00000526313 BPIFA4PQ86YQ2 179 aa12.46□□□□□ -0.42
USH1C-204ENST00000526313 TMEM183AQ8IXX5 376 aa12.46□□□□□ -0.42
USH1C-204ENST00000526313 MBD6Q96DN6 1003 aa12.46□□□□□ -0.42
USH1C-204ENST00000526313 FBXL7Q9UJT9 491 aa12.46□□□□□ -0.42
USH1C-204ENST00000526313 TRBV19A0A075B6N1 114 aa12.45□□□□□ -0.42
USH1C-204ENST00000526313 ATP6V0E1O15342 81 aa12.45□□□□□ -0.42
USH1C-204ENST00000526313 MGST1P10620 155 aaKnown RBP12.45□□□□□ -0.42
USH1C-204ENST00000526313 Q56UQ5 140 aa12.45□□□□□ -0.42
USH1C-204ENST00000526313 S100A7AQ86SG5 101 aa12.45□□□□□ -0.42
USH1C-204ENST00000526313 ZNF843Q8N446 348 aa12.45□□□□□ -0.42
USH1C-204ENST00000526313 FMC1Q96HJ9 113 aa12.45□□□□□ -0.42
USH1C-204ENST00000526313 DSCR9P59020 149 aa12.44□□□□□ -0.42
USH1C-204ENST00000526313 UNQ5815/PRO19632Q6UWF5 114 aa12.44□□□□□ -0.42
USH1C-204ENST00000526313 LYPD1Q8N2G4 141 aa12.44□□□□□ -0.42
USH1C-204ENST00000526313 NHLRC2Q8NBF2 726 aa12.44□□□□□ -0.42
USH1C-204ENST00000526313 ZNF414Q96IQ9 312 aa12.44□□□□□ -0.42
USH1C-204ENST00000526313 GPR82Q96P67 336 aa12.44□□□□□ -0.42
USH1C-204ENST00000526313 XKRY2A2RUG3 117 aa12.44□□□□□ -0.42
USH1C-204ENST00000526313 H3BTX0 84 aa12.44□□□□□ -0.42
USH1C-204ENST00000526313 LTAP01374 205 aa12.44□□□□□ -0.42
USH1C-204ENST00000526313 UBE2G1P62253 170 aa12.44□□□□□ -0.42
USH1C-204ENST00000526313 SRSF1Q07955 248 aaKnown RBP eCLIP12.44□□□□□ -0.42
USH1C-204ENST00000526313 OR8I2Q8N0Y5 310 aa12.44□□□□□ -0.42
USH1C-204ENST00000526313 BCL6BQ8N143 479 aaPredicted RBP12.44□□□□□ -0.42
USH1C-204ENST00000526313 NIT2Q9NQR4 276 aa12.44□□□□□ -0.42
USH1C-204ENST00000526313 TRBV6-1A0A0K0K1D8 114 aa12.43□□□□□ -0.42
USH1C-204ENST00000526313 LINC01548A6NM66 108 aa12.43□□□□□ -0.42
USH1C-204ENST00000526313 S100A2P29034 98 aa12.43□□□□□ -0.42
USH1C-204ENST00000526313 ADMP35318 185 aa12.43□□□□□ -0.42
USH1C-204ENST00000526313 ZNF502Q8TBZ5 544 aa12.43□□□□□ -0.42
USH1C-204ENST00000526313 TMUB1Q9BVT8 246 aa12.43□□□□□ -0.42
USH1C-204ENST00000526313 VPS13CQ709C8 3753 aa12.43□□□□□ -0.42
USH1C-204ENST00000526313 SVEP1Q4LDE5 3571 aa12.43□□□□□ -0.42
USH1C-204ENST00000526313 AMY1AP04745 511 aa12.43□□□□□ -0.42
USH1C-204ENST00000526313 MSMBP08118 114 aa12.43□□□□□ -0.42
USH1C-204ENST00000526313 CRIP2P52943 208 aaPredicted RBP12.43□□□□□ -0.42
USH1C-204ENST00000526313 C19orf54Q5BKX5 351 aa12.43□□□□□ -0.42
USH1C-204ENST00000526313 NUDT10Q8NFP7 164 aa12.43□□□□□ -0.42
USH1C-204ENST00000526313 OR4F17Q8NGA8 305 aa12.43□□□□□ -0.42
USH1C-204ENST00000526313 NUDT11Q96G61 164 aa12.43□□□□□ -0.42
USH1C-204ENST00000526313 TRAV40A0A0B4J280 105 aa12.42□□□□□ -0.42
USH1C-204ENST00000526313 SCGB2A1O75556 95 aa12.42□□□□□ -0.42
USH1C-204ENST00000526313 SIGLEC15Q6ZMC9 328 aa12.42□□□□□ -0.42
USH1C-204ENST00000526313 HIST1H2BLQ99880 126 aa12.42□□□□□ -0.42
USH1C-204ENST00000526313 CHRDL1Q9BU40 450 aa12.42□□□□□ -0.42
USH1C-204ENST00000526313 GNB1LQ9BYB4 327 aa12.42□□□□□ -0.42
USH1C-204ENST00000526313 MOB4Q9Y3A3 225 aa12.42□□□□□ -0.42
USH1C-204ENST00000526313 MYO18BQ8IUG5 2567 aa12.42□□□□□ -0.42
USH1C-204ENST00000526313 IGHV3OR16-10A0A075B7F0 116 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 OR2T8A6NH00 312 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms