RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 LINC00467Q9BRT7 94 aa2.66□□□□□ -1.98
USP47-206ENST00000525367 BCL2L10Q9HD36 194 aa2.66□□□□□ -1.98
USP47-206ENST00000525367 MAST2Q6P0Q8 1798 aa2.66□□□□□ -1.98
USP47-206ENST00000525367 A2MP01023 1474 aa2.65□□□□□ -1.98
USP47-206ENST00000525367 NCAPD3P42695 1498 aa2.65□□□□□ -1.98
USP47-206ENST00000525367 IGLV10-54A0A075B6I4 117 aa2.65□□□□□ -1.99
USP47-206ENST00000525367 TRAV13-1A0A0B4J241 112 aa2.65□□□□□ -1.99
USP47-206ENST00000525367 LOC107984640A0A0U1RRK4 108 aa2.65□□□□□ -1.99
USP47-206ENST00000525367 FNDC10F2Z333 226 aa2.65□□□□□ -1.99
USP47-206ENST00000525367 H3BMG7 143 aa2.65□□□□□ -1.99
USP47-206ENST00000525367 J3QQQ9 107 aa2.65□□□□□ -1.99
USP47-206ENST00000525367 RER1O15258 196 aa2.65□□□□□ -1.99
USP47-206ENST00000525367 TIMM17BO60830 172 aa2.65□□□□□ -1.99
USP47-206ENST00000525367 PMP2P02689 132 aa2.65□□□□□ -1.99
USP47-206ENST00000525367 EVI2AP22794 236 aa2.65□□□□□ -1.99
USP47-206ENST00000525367 C3orf56Q8N813 242 aa2.65□□□□□ -1.99
USP47-206ENST00000525367 OR51A4Q8NGJ6 313 aa2.65□□□□□ -1.99
USP47-206ENST00000525367 CALML5Q9NZT1 146 aa2.65□□□□□ -1.99
USP47-206ENST00000525367 ZNF106Q9H2Y7 1883 aaKnown RBP2.65□□□□□ -1.99
USP47-206ENST00000525367 TMSB15BA0A087X1C1 80 aa2.64□□□□□ -1.99
USP47-206ENST00000525367 C5orf58C9J3I9 102 aa2.64□□□□□ -1.99
USP47-206ENST00000525367 M0R2Z0 102 aa2.64□□□□□ -1.99
USP47-206ENST00000525367 PAEPP09466 180 aa2.64□□□□□ -1.99
USP47-206ENST00000525367 SPCS2Q15005 226 aa2.64□□□□□ -1.99
USP47-206ENST00000525367 ZNF791Q3KP31 576 aaPredicted RBP2.64□□□□□ -1.99
USP47-206ENST00000525367 KRTAP13-3Q3SY46 172 aa2.64□□□□□ -1.99
USP47-206ENST00000525367 SPANXN5Q5MJ07 72 aa2.64□□□□□ -1.99
USP47-206ENST00000525367 Q6ZQT0 140 aa2.64□□□□□ -1.99
USP47-206ENST00000525367 LRRC28Q86X40 367 aaPredicted RBP2.64□□□□□ -1.99
USP47-206ENST00000525367 OR8B3Q8NGG8 313 aa2.64□□□□□ -1.99
USP47-206ENST00000525367 MAGOHBQ96A72 148 aaKnown RBP2.64□□□□□ -1.99
USP47-206ENST00000525367 ZC2HC1AQ96GY0 325 aa2.64□□□□□ -1.99
USP47-206ENST00000525367 MCEEQ96PE7 176 aa2.64□□□□□ -1.99
USP47-206ENST00000525367 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
USP47-206ENST00000525367 TAS2R4Q9NYW5 299 aa2.64□□□□□ -1.99
USP47-206ENST00000525367 U3KQ87 197 aa2.64□□□□□ -1.99
USP47-206ENST00000525367 SHANK3Q9BYB0 1731 aa2.64□□□□□ -1.99
USP47-206ENST00000525367 KIF26AQ9ULI4 1882 aaPredicted RBP2.64□□□□□ -1.99
USP47-206ENST00000525367 LCTP09848 1927 aa2.64□□□□□ -1.99
USP47-206ENST00000525367 PRR14LQ5THK1 2151 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 NCOA3Q9Y6Q9 1424 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 J3QR89 54 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 K7ERJ3 54 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 IGLV3-19P01714 112 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 MT-ND6P03923 174 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 CLPSP04118 112 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 HIST1H1AQ02539 215 aaPredicted RBP2.63□□□□□ -1.99
USP47-206ENST00000525367 KLRD1Q13241 179 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 NNATQ16517 81 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 ESRGQ1W209 222 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 RPL13AP3Q6NVV1 102 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 IGFL3Q6UXB1 125 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
USP47-206ENST00000525367 LRRC18Q8N456 261 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 TSTD1Q8NFU3 115 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 OR5H6Q8NGV6 325 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 TVP23CQ96ET8 276 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 SMIM3Q9BZL3 60 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 CBLN4Q9NTU7 201 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 CCL26Q9Y258 94 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 SCAF11Q99590 1463 aaKnown RBP2.63□□□□□ -1.99
USP47-206ENST00000525367 CEP164Q9UPV0 1460 aa2.63□□□□□ -1.99
USP47-206ENST00000525367 RIMBP3CA6NJZ7 1639 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 RIMBP3BA6NNM3 1639 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 RIMBP3Q9UFD9 1639 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 TRBV27A0A0K0K1C4 114 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 A0A1B0GW64 132 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 E7EQL1 145 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 TPST1O60507 370 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 C1QCP02747 245 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 CTSDP07339 412 aaPredicted RBP2.62□□□□□ -1.99
USP47-206ENST00000525367 RPL22P35268 128 aaKnown RBP2.62□□□□□ -1.99
USP47-206ENST00000525367 RPL26P61254 145 aaKnown RBP2.62□□□□□ -1.99
USP47-206ENST00000525367 ZNF345Q14585 488 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 TEX29Q8N6K0 151 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 OR4B1Q8NGF8 309 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 BRK1Q8WUW1 75 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 RPL26L1Q9UNX3 145 aaKnown RBP2.62□□□□□ -1.99
USP47-206ENST00000525367 LY96Q9Y6Y9 160 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 ECM29Q5VYK3 1845 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 CACNA1SQ13698 1873 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 CCDC171Q6TFL3 1326 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 PLXND1Q9Y4D7 1925 aa2.62□□□□□ -1.99
USP47-206ENST00000525367 ADGBQ8N7X0 1667 aa2.61□□□□□ -1.99
USP47-206ENST00000525367 ERCC6Q03468 1493 aa2.61□□□□□ -1.99
USP47-206ENST00000525367 A0A1W2PNN7 141 aa2.61□□□□□ -1.99
USP47-206ENST00000525367 K7EP13 123 aa2.61□□□□□ -1.99
USP47-206ENST00000525367 PROSCO94903 275 aa2.61□□□□□ -1.99
USP47-206ENST00000525367 SHBGP04278 402 aa2.61□□□□□ -1.99
USP47-206ENST00000525367 BAALC-AS2P0C853 105 aa2.61□□□□□ -1.99
USP47-206ENST00000525367 CSRP1P21291 193 aaKnown RBP2.61□□□□□ -1.99
USP47-206ENST00000525367 TMEM244Q5VVB8 128 aa2.61□□□□□ -1.99
USP47-206ENST00000525367 Q6ZTI0 123 aa2.61□□□□□ -1.99
USP47-206ENST00000525367 OR4S1Q8NGB4 309 aa2.61□□□□□ -1.99
USP47-206ENST00000525367 OR5A2Q8NGI9 324 aa2.61□□□□□ -1.99
USP47-206ENST00000525367 ZNF418Q8TF45 676 aaPredicted RBP2.61□□□□□ -1.99
USP47-206ENST00000525367 C1orf54Q8WWF1 131 aa2.61□□□□□ -1.99
USP47-206ENST00000525367 CHCHD1Q96BP2 118 aaKnown RBP2.61□□□□□ -1.99
USP47-206ENST00000525367 PRELID3AQ96N28 172 aa2.61□□□□□ -1.99
USP47-206ENST00000525367 C20orf166-AS1Q96NR2 134 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms