RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 TRBV20OR9-2A0A075B6H5 130 aa16.18■□□□□ 0.18
SQLE-206ENST00000523430 H3BRN7 92 aa16.18■□□□□ 0.18
SQLE-206ENST00000523430 ZNF414Q96IQ9 312 aa16.18■□□□□ 0.18
SQLE-206ENST00000523430 Q8WTZ3 238 aa16.17■□□□□ 0.18
SQLE-206ENST00000523430 BLNKQ8WV28 456 aa16.17■□□□□ 0.18
SQLE-206ENST00000523430 SHANK2-AS3Q9BTD1 123 aa16.17■□□□□ 0.18
SQLE-206ENST00000523430 CSPG4Q6UVK1 2322 aa16.17■□□□□ 0.18
SQLE-206ENST00000523430 ITPR3Q14573 2671 aa16.17■□□□□ 0.18
SQLE-206ENST00000523430 A0A087WWC5 75 aa16.16■□□□□ 0.18
SQLE-206ENST00000523430 PGPEP1LA6NFU8 196 aa16.16■□□□□ 0.18
SQLE-206ENST00000523430 CRYBB3P26998 211 aa16.16■□□□□ 0.18
SQLE-206ENST00000523430 SUMO1P63165 101 aaKnown RBP16.16■□□□□ 0.18
SQLE-206ENST00000523430 TMEM95Q3KNT9 176 aa16.16■□□□□ 0.18
SQLE-206ENST00000523430 IL17RELQ6ZVW7 336 aa16.16■□□□□ 0.18
SQLE-206ENST00000523430 EEF1AKMT3Q96AZ1 226 aa16.16■□□□□ 0.18
SQLE-206ENST00000523430 ELOVL1Q9BW60 279 aa16.16■□□□□ 0.18
SQLE-206ENST00000523430 IGHV3-35A0A0C4DH35 117 aa16.16■□□□□ 0.18
SQLE-206ENST00000523430 B4DEV8 164 aa16.16■□□□□ 0.18
SQLE-206ENST00000523430 H3BTX0 84 aa16.16■□□□□ 0.18
SQLE-206ENST00000523430 SCGB2A1O75556 95 aa16.16■□□□□ 0.18
SQLE-206ENST00000523430 PPIFP30405 207 aaKnown RBP16.16■□□□□ 0.18
SQLE-206ENST00000523430 ZNF343Q6P1L6 599 aa16.16■□□□□ 0.18
SQLE-206ENST00000523430 CLEC19AQ6UXS0 136 aa16.16■□□□□ 0.18
SQLE-206ENST00000523430 Q6YL49 198 aa16.16■□□□□ 0.18
SQLE-206ENST00000523430 OR5R1Q8NH85 324 aa16.16■□□□□ 0.18
SQLE-206ENST00000523430 AURKAIP1Q9NWT8 199 aaPredicted RBP16.16■□□□□ 0.18
SQLE-206ENST00000523430 COLCA2A8K830 154 aa16.15■□□□□ 0.18
SQLE-206ENST00000523430 TRGV3P03979 118 aa16.15■□□□□ 0.18
SQLE-206ENST00000523430 CLEC3BP05452 202 aa16.15■□□□□ 0.18
SQLE-206ENST00000523430 ZNF600Q6ZNG1 722 aa16.15■□□□□ 0.18
SQLE-206ENST00000523430 FOXC2Q99958 501 aa16.15■□□□□ 0.18
SQLE-206ENST00000523430 VPREB3Q9UKI3 123 aa16.15■□□□□ 0.18
SQLE-206ENST00000523430 AP4M1O00189 453 aa16.14■□□□□ 0.17
SQLE-206ENST00000523430 RNF212Q495C1 297 aa16.14■□□□□ 0.17
SQLE-206ENST00000523430 LINC01551Q86U37 167 aa16.14■□□□□ 0.17
SQLE-206ENST00000523430 ZNF329Q86UD4 541 aa16.14■□□□□ 0.17
SQLE-206ENST00000523430 TUBA4BQ9H853 241 aa16.14■□□□□ 0.17
SQLE-206ENST00000523430 AKAP9Q99996 3911 aa16.14■□□□□ 0.17
SQLE-206ENST00000523430 UNC79Q9P2D8 2635 aa16.14■□□□□ 0.17
SQLE-206ENST00000523430 FAM223BA6NKX1 122 aa16.14■□□□□ 0.17
SQLE-206ENST00000523430 RPL35P42766 123 aaKnown RBP16.14■□□□□ 0.17
SQLE-206ENST00000523430 TPPP2P59282 170 aa16.14■□□□□ 0.17
SQLE-206ENST00000523430 ATP5G2Q06055 141 aa16.14■□□□□ 0.17
SQLE-206ENST00000523430 FAM223AQ8IWN6 122 aa16.14■□□□□ 0.17
SQLE-206ENST00000523430 C15orf54Q8N8G6 183 aa16.14■□□□□ 0.17
SQLE-206ENST00000523430 GNB4Q9HAV0 340 aa16.14■□□□□ 0.17
SQLE-206ENST00000523430 TMEM14CQ9P0S9 112 aa16.14■□□□□ 0.17
SQLE-206ENST00000523430 IGHV3OR16-8A0A075B7F1 116 aa16.13■□□□□ 0.17
SQLE-206ENST00000523430 TRBV7-1A0A0A6YYK4 115 aa16.13■□□□□ 0.17
SQLE-206ENST00000523430 HOXA3O43365 443 aaPredicted RBP16.13■□□□□ 0.17
SQLE-206ENST00000523430 NBEAP1P0C6P0 100 aa16.13■□□□□ 0.17
SQLE-206ENST00000523430 RANP62826 216 aaKnown RBP16.13■□□□□ 0.17
SQLE-206ENST00000523430 C2CD4CQ8TF44 421 aa16.13■□□□□ 0.17
SQLE-206ENST00000523430 MYCNOSP40205 109 aa16.12■□□□□ 0.17
SQLE-206ENST00000523430 YPEL4Q96NS1 127 aa16.12■□□□□ 0.17
SQLE-206ENST00000523430 ZNF586Q9NXT0 402 aa16.12■□□□□ 0.17
SQLE-206ENST00000523430 ZNF98A6NK75 572 aa16.12■□□□□ 0.17
SQLE-206ENST00000523430 TGOLN2O43493 480 aa16.12■□□□□ 0.17
SQLE-206ENST00000523430 HNF1AP20823 631 aa16.12■□□□□ 0.17
SQLE-206ENST00000523430 CFHR3Q02985 330 aa16.12■□□□□ 0.17
SQLE-206ENST00000523430 FAM24BQ8N5W8 94 aa16.12■□□□□ 0.17
SQLE-206ENST00000523430 HIST1H2BAQ96A08 127 aa16.12■□□□□ 0.17
SQLE-206ENST00000523430 ZFAND3Q9H8U3 227 aa16.12■□□□□ 0.17
SQLE-206ENST00000523430 PPP5D1E7EU14 171 aa16.11■□□□□ 0.17
SQLE-206ENST00000523430 GNG5P63218 68 aa16.11■□□□□ 0.17
SQLE-206ENST00000523430 KRTAP1-1Q07627 177 aa16.11■□□□□ 0.17
SQLE-206ENST00000523430 KLK15Q9H2R5 256 aa16.11■□□□□ 0.17
SQLE-206ENST00000523430 TEX15Q9BXT5 2789 aa16.1■□□□□ 0.17
SQLE-206ENST00000523430 TOMM20LQ6UXN7 152 aa16.1■□□□□ 0.17
SQLE-206ENST00000523430 LCNL1Q6ZST4 164 aa16.1■□□□□ 0.17
SQLE-206ENST00000523430 GAR1Q9NY12 217 aaKnown RBP16.1■□□□□ 0.17
SQLE-206ENST00000523430 URGCP-MRPS24S4R325 110 aa16.1■□□□□ 0.17
SQLE-206ENST00000523430 H3BUA1 57 aa16.1■□□□□ 0.17
SQLE-206ENST00000523430 MRPS12O15235 138 aaKnown RBP16.1■□□□□ 0.17
SQLE-206ENST00000523430 IGLC2P0DOY2 106 aa16.1■□□□□ 0.17
SQLE-206ENST00000523430 CENPWQ5EE01 88 aa16.1■□□□□ 0.17
SQLE-206ENST00000523430 BPIFA4PQ86YQ2 179 aa16.1■□□□□ 0.17
SQLE-206ENST00000523430 PRDM13Q9H4Q3 707 aa16.1■□□□□ 0.17
SQLE-206ENST00000523430 C9JCJ5 164 aa16.09■□□□□ 0.17
SQLE-206ENST00000523430 BRI3O95415 125 aa16.09■□□□□ 0.17
SQLE-206ENST00000523430 IGLV1-40P01703 118 aa16.09■□□□□ 0.17
SQLE-206ENST00000523430 HIST1H1EP10412 219 aaKnown RBP16.09■□□□□ 0.17
SQLE-206ENST00000523430 PF4V1P10720 104 aa16.09■□□□□ 0.17
SQLE-206ENST00000523430 ATF4P18848 351 aaPredicted RBP16.09■□□□□ 0.17
SQLE-206ENST00000523430 Q9H3A6 140 aa16.09■□□□□ 0.17
SQLE-206ENST00000523430 RABAC1Q9UI14 185 aa16.09■□□□□ 0.17
SQLE-206ENST00000523430 PEX7O00628 323 aa16.08■□□□□ 0.17
SQLE-206ENST00000523430 SIGLECL1Q8N7X8 197 aa16.08■□□□□ 0.17
SQLE-206ENST00000523430 OCC1Q8TAD7 63 aa16.08■□□□□ 0.17
SQLE-206ENST00000523430 LINC00479Q96M42 142 aa16.08■□□□□ 0.17
SQLE-206ENST00000523430 C17orf77Q96MU5 243 aa16.08■□□□□ 0.17
SQLE-206ENST00000523430 ZNF580Q9UK33 172 aa16.08■□□□□ 0.17
SQLE-206ENST00000523430 CCDC168Q8NDH2 2452 aa16.08■□□□□ 0.16
SQLE-206ENST00000523430 PGPA6NDG6 321 aa16.08■□□□□ 0.16
SQLE-206ENST00000523430 HELTA6NFD8 242 aa16.08■□□□□ 0.16
SQLE-206ENST00000523430 K7EN84 100 aa16.08■□□□□ 0.16
SQLE-206ENST00000523430 BMPR1BO00238 502 aa16.08■□□□□ 0.16
SQLE-206ENST00000523430 TRBV12-3P01733 135 aa16.08■□□□□ 0.16
SQLE-206ENST00000523430 MT-ND4LP03901 98 aa16.08■□□□□ 0.16
SQLE-206ENST00000523430 ELOBQ15370 118 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 628.2 ms