RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 FFAR1O14842 300 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 SSNA1O43805 119 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 ATP6V1G2O95670 118 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 CA2P00918 260 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 IGKV1D-33P01593 117 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 IGKV1-33P01594 117 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 CELP19835 753 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 HSPA13P48723 471 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 PTGES3Q15185 160 aaKnown RBP2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 KLHL12Q53G59 568 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 LINC00483Q53H64 154 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 PDZD11Q5EBL8 140 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 SPANXN3Q5MJ09 141 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 OGFRL1Q5TC84 451 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 ZNF773Q6PK81 442 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 ABCG5Q9H222 651 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 PLEKHJ1Q9NW61 149 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 HHLA2Q9UM44 414 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 IGKV2-28A0A075B6P5 120 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 TRAV36DV7A0A075B6V5 113 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 EXOC1LA0A1B0GW35 172 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 ARRDC5A6NEK1 342 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 C17orf98A8MV24 154 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 G3V318 75 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 H3BP45 60 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 K7EPK0 472 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 BHLHE40O14503 412 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 KLHL2O95198 593 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 IGKV2D-28P01615 120 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 CST2P09228 141 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 SCTP09683 121 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 ZNF728P0DKX0 622 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 CFL1P23528 166 aaKnown RBP2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 CD34P28906 385 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 EDDM3BP56851 147 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 IMPG1Q17R60 797 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 NXNL2Q5VZ03 156 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 SMARCD3Q6STE5 483 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 H1FOOQ8IZA3 346 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 PPP1R36Q96LQ0 422 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 DERL3Q96Q80 235 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 HSPB9Q9BQS6 159 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 TMEM133Q9H2Q1 129 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 PYCARDQ9ULZ3 195 aa2.84□□□□□ -1.95
HMGB1P23-201ENST00000518743 ATP8B1O43520 1251 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 ZNF324O75467 553 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 BANF1O75531 89 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 IGKV1-39P01597 117 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 IGKV1D-39P04432 117 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 COX5BP10606 129 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 PTHLHP12272 177 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 NTF3P20783 257 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 TPPP2P59282 170 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 FMODQ06828 376 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 FUT5Q11128 374 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 CDK5R1Q15078 307 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 RGS21Q2M5E4 152 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 SP6Q3SY56 376 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 FAM27BQ5VT28 67 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 ZNF880Q6PDB4 577 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 DNM1P34Q6PK57 102 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 C5orf46Q6UWT4 87 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 PRNTQ86SH4 94 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 UBL4BQ8N7F7 174 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 ROPN1LQ96C74 230 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 SLC35G5Q96KT7 338 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 ZNF714Q96N38 554 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 GPR22Q99680 433 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 OR51E2Q9H255 320 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 ANGPT4Q9Y264 503 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 SSPOA2VEC9 5147 aa2.83□□□□□ -1.96
HMGB1P23-201ENST00000518743 IGKV1D-17A0A075B6S4 117 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 TRAV41A0A0B4J266 112 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 IGKV1-6A0A0C4DH72 117 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 LRRN3E7EW58 273 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 TMEM250H0YL14 139 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 RBP4P02753 201 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 HTN3P15516 51 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 MYL5Q02045 173 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 TNFAIP8L2Q6P589 184 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 RPS27LQ71UM5 84 aaKnown RBP2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 TRAPPC6BQ86SZ2 158 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 MIR7-3HGQ8N6C7 128 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 ST20-AS1Q8NBB2 130 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 OR1M1Q8NGA1 313 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 OR5J2Q8NH18 312 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 SMIM19Q96E16 107 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 CCDC42Q96M95 316 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 C6orf62Q9GZU0 229 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 NSRP1Q9H0G5 558 aaKnown RBP2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 OR51I1Q9H343 314 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 CACYBPQ9HB71 228 aaKnown RBP2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 FGFR1OP2Q9NVK5 253 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 TMEM216Q9P0N5 145 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 PCTPQ9UKL6 214 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 POMPQ9Y244 141 aa2.82□□□□□ -1.96
HMGB1P23-201ENST00000518743 OR6C6A6NF89 314 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 LY6LH3BQJ8 138 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 BUB1B-PAK6H3BSN5 160 aa2.81□□□□□ -1.96
HMGB1P23-201ENST00000518743 K7ERS5 55 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms