RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 Q6ZVH6 145 aa5.42□□□□□ -1.54
CPNE3-203ENST00000517490 H0YJW9 148 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 C16orf97H3BN30 126 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 ATP5LO75964 103 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 SNCGO76070 127 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 SAMD5Q5TGI4 173 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 TTC9CQ8N5M4 171 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 IGF2BP2-AS1Q96M15 143 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 IL4P05112 153 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 CTRLP40313 264 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 HERVK_113P61574 105 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 SRSF9Q13242 221 aaKnown RBP eCLIP5.41□□□□□ -1.54
CPNE3-203ENST00000517490 KIR3DS1Q14943 382 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 ATP1A1-AS1Q5TC04 95 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 Q6ZR03 302 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 FAM168AQ92567 244 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 SIGMAR1Q99720 223 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 NDUFA4L2Q9NRX3 87 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 CPAMD8Q8IZJ3 1885 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 C9orf118A6NHY6 69 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 PPBPP02775 128 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 IGKV1-16P04430 117 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 ZNF134P52741 427 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 ZNF138P52744 262 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 PRR31Q5SQ13 230 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 Q86TA4 180 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 C11orf53Q8IXP5 236 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 C18orf15Q96N68 181 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 FRMD6-AS1P0C7T7 363 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 CCL3L1P16619 93 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 LOXL3P58215 753 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 DAZAP2Q15038 168 aaPredicted RBP5.41□□□□□ -1.54
CPNE3-203ENST00000517490 C10orf55Q5SWW7 151 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 PVRIGQ6DKI7 326 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 ZCCHC24Q8N2G6 241 aaKnown RBP5.41□□□□□ -1.54
CPNE3-203ENST00000517490 FER1L6-AS1Q8NA97 138 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 C1orf43Q9BWL3 253 aa5.41□□□□□ -1.54
CPNE3-203ENST00000517490 HAX1O00165 279 aa5.4□□□□□ -1.54
CPNE3-203ENST00000517490 CFHR2P36980 270 aa5.4□□□□□ -1.54
CPNE3-203ENST00000517490 PLA2G5P39877 138 aa5.4□□□□□ -1.54
CPNE3-203ENST00000517490 C17orf58Q2M2W7 97 aa5.4□□□□□ -1.54
CPNE3-203ENST00000517490 NKX2-8O15522 239 aa5.4□□□□□ -1.55
CPNE3-203ENST00000517490 SMIM17P0DL12 118 aa5.4□□□□□ -1.55
CPNE3-203ENST00000517490 TRIP6Q15654 476 aaKnown RBP5.4□□□□□ -1.55
CPNE3-203ENST00000517490 SPANXN1Q5VSR9 72 aa5.4□□□□□ -1.55
CPNE3-203ENST00000517490 FXYD5Q96DB9 178 aa5.4□□□□□ -1.55
CPNE3-203ENST00000517490 GAFA1Q96PS6 74 aa5.4□□□□□ -1.55
CPNE3-203ENST00000517490 MCRIP2Q9BUT9 160 aaKnown RBP5.4□□□□□ -1.55
CPNE3-203ENST00000517490 NXT2Q9NPJ8 142 aaKnown RBP5.4□□□□□ -1.55
CPNE3-203ENST00000517490 SMPXQ9UHP9 88 aa5.4□□□□□ -1.55
CPNE3-203ENST00000517490 RABAC1Q9UI14 185 aa5.4□□□□□ -1.55
CPNE3-203ENST00000517490 DIDO1Q9BTC0 2240 aaKnown RBP5.4□□□□□ -1.55
CPNE3-203ENST00000517490 PTPRZ1P23471 2315 aaPredicted RBP5.4□□□□□ -1.55
CPNE3-203ENST00000517490 D6R8Y8 96 aa5.4□□□□□ -1.55
CPNE3-203ENST00000517490 EIF4EBP1Q13541 118 aaPredicted RBP5.4□□□□□ -1.55
CPNE3-203ENST00000517490 FOXC2Q99958 501 aa5.4□□□□□ -1.55
CPNE3-203ENST00000517490 TMEM160Q9NX00 188 aa5.4□□□□□ -1.55
CPNE3-203ENST00000517490 OR11H12B2RN74 326 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 NDUFB8O95169 186 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 IGHV1-46P01743 117 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 LEPP41159 167 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 BRWD1-AS2P59051 145 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 LYPD1Q8N2G4 141 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 OR11H1Q8NG94 326 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 OR11H2Q8NH07 326 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 SLC25A39Q9BZJ4 359 aaPredicted RBP5.39□□□□□ -1.55
CPNE3-203ENST00000517490 SLC25A15Q9Y619 301 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 K7EP34 96 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 DPM2O94777 84 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 THAP8Q8NA92 274 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 ZNF71Q9NQZ8 489 aaPredicted RBP5.39□□□□□ -1.55
CPNE3-203ENST00000517490 NHP2Q9NX24 153 aaKnown RBP5.39□□□□□ -1.55
CPNE3-203ENST00000517490 C1RLQ9NZP8 487 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 TRAV8-6A0A0B4J262 113 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 A0A1W2PRD5 423 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 A0A1W2PRF3 423 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 A0A1W2PRM7 423 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 RAB9AP51151 201 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 EXOC3-AS1Q8N2X6 119 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 DDB2Q92466 427 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 FBXL15Q9H469 300 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 TAX1BP3O14907 124 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 IGKCP01834 107 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 FTH1P19P0C7X4 201 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 TMEM78Q5T7P6 136 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 ZNF788Q6ZQV5 615 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 PPP1R27Q86WC6 154 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 BCL6BQ8N143 479 aaPredicted RBP5.39□□□□□ -1.55
CPNE3-203ENST00000517490 FDCSPQ8NFU4 85 aa5.39□□□□□ -1.55
CPNE3-203ENST00000517490 NAA38Q9BRA0 125 aaKnown RBP5.39□□□□□ -1.55
CPNE3-203ENST00000517490 DNAJC13O75165 2243 aa5.38□□□□□ -1.55
CPNE3-203ENST00000517490 CHD3Q12873 2000 aaKnown RBP5.38□□□□□ -1.55
CPNE3-203ENST00000517490 TRAV8-1A0A0A6YYK1 113 aa5.38□□□□□ -1.55
CPNE3-203ENST00000517490 Q1RN00 199 aa5.38□□□□□ -1.55
CPNE3-203ENST00000517490 LGALS9BQ3B8N2 356 aa5.38□□□□□ -1.55
CPNE3-203ENST00000517490 LGALS9CQ6DKI2 356 aa5.38□□□□□ -1.55
CPNE3-203ENST00000517490 CCDC144NLQ6NUI1 221 aa5.38□□□□□ -1.55
CPNE3-203ENST00000517490 ZNF833PQ6ZTB9 187 aa5.38□□□□□ -1.55
CPNE3-203ENST00000517490 WFDC3Q8IUB2 231 aa5.38□□□□□ -1.55
CPNE3-203ENST00000517490 TPRP12270 2363 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms