RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 HLA-DRB4X5D2U9 266 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 FAT4Q6V0I7 4981 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 IGHV3OR16-12A0A075B7B8 117 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 LINC00854A0A1B0GVQ3 168 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 TCRBV3S1A0A5B6 114 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 KRTAP16-1A8MUX0 517 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 I3L2K1 104 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 SIVA1O15304 175 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 TMEM50AO95807 157 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 CD3GP09693 182 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 PRB4P10163 310 aaPredicted RBP2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 P2RY1P47900 373 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 CYCSP99999 105 aaKnown RBP2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 DHRS2Q13268 280 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 UNC119Q13432 240 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 EIF4EBP1Q13541 118 aaPredicted RBP2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 TIMM50Q3ZCQ8 353 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 PSMG4Q5JS54 123 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 ADAMTSL4-AS1Q5T5F5 129 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 XAF1Q6GPH4 301 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 OR10K2Q6IF99 312 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 SPATA24Q86W54 205 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 C1orf158Q8N1D5 194 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 OR56B1Q8NGI3 324 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 OR13F1Q8NGS4 319 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 RHOXF1Q8NHV9 184 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 RXFP4Q8TDU9 374 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 PHYHIPQ92561 330 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 SLC25A46Q96AG3 418 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 GNPNAT1Q96EK6 184 aaPredicted RBP2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 ARHGAP5-AS1Q96IT6 56 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 CYYR1Q96J86 154 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 METTL26Q96S19 204 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 OPRPNQ99935 248 aaPredicted RBP2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 C7orf50Q9BRJ6 194 aaKnown RBP2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 HDHD3Q9BSH5 251 aaPredicted RBP2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 PECRQ9BY49 303 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 HRASLSQ9HDD0 168 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 ZNF446Q9NWS9 450 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 PKHD1L1Q86WI1 4243 aa2.45□□□□□ -2.02
PDLIM5-218ENST00000513341 TRAV30A0A087WSZ9 112 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 A0A0A6YYD4 124 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 IRGMA1A4Y4 181 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 RS1O15537 224 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 SCGB2A1O75556 95 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 ADAP1O75689 374 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 DEFB130BP0DP73 79 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 DEFB130AP0DP74 79 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 M6PRP20645 277 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 RORCP51449 518 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 PAX9P55771 341 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 ARPC4P59998 168 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 KRTAP10-4P60372 401 aaPredicted RBP2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 PSG9Q00887 426 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 ST3GAL4Q11206 333 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 SRSF9Q13242 221 aaKnown RBP eCLIP2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 ASAH1Q13510 395 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 FLOT2Q14254 428 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 ARL6IP1Q15041 203 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 RAB11BQ15907 218 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 ACSM3Q53FZ2 586 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 FOXI2Q6ZQN5 318 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 Q6ZSA8 131 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 GPR141Q7Z602 305 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 TPRA1Q86W33 373 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 HOGA1Q86XE5 327 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 MS4A15Q8N5U1 240 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 OR4D10Q8NGI6 311 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 OR52I1Q8NGK6 324 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 SUN5Q8TC36 379 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 TCTEX1D2Q8WW35 142 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 PGLYRP3Q96LB9 341 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 IGF2BP2-AS1Q96M15 143 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 DERL3Q96Q80 235 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 SPXQ9BT56 116 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 SAV1Q9H4B6 383 aaPredicted RBP2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 NRN1Q9NPD7 142 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 PLCXD1Q9NUJ7 323 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 SPATA2Q9UM82 520 aa2.44□□□□□ -2.02
PDLIM5-218ENST00000513341 TNXBP22105 4242 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 IGLV7-46A0A075B6I9 117 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 A0A087X0K7 114 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 IGHV3-21A0A0B4J1V1 117 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 IGHV3-66A0A0C4DH42 116 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 DENRO43583 198 aaKnown RBP2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 SNAPC5O75971 98 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 MT-CO2P00403 227 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 LALBAP00709 142 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 FCGR3AP08637 254 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 CALB2P22676 271 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 DTYMKP23919 212 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 FUSP35637 526 aaKnown RBP eCLIP2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 TALDO1P37837 337 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 ID1P41134 155 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 ETV6P41212 452 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 ASIPP42127 132 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 HSPA13P48723 471 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 ETV1P50549 477 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 CATR1Q13166 79 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 OR5I1Q13606 314 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms