RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 OR51B2Q9Y5P1 312 aa8.18□□□□□ -1.1
RNF4-216ENST00000511859 PUS1Q9Y606 427 aaKnown RBP eCLIP8.18□□□□□ -1.1
RNF4-216ENST00000511859 RFNGQ9Y644 331 aa8.18□□□□□ -1.1
RNF4-216ENST00000511859 A0A0B4J293 547 aa8.17□□□□□ -1.1
RNF4-216ENST00000511859 ZNF705FA8MVS1 300 aaPredicted RBP8.17□□□□□ -1.1
RNF4-216ENST00000511859 MT-CO2P00403 227 aa8.17□□□□□ -1.1
RNF4-216ENST00000511859 P0C879 139 aa8.17□□□□□ -1.1
RNF4-216ENST00000511859 ZNF705DP0CH99 300 aaPredicted RBP8.17□□□□□ -1.1
RNF4-216ENST00000511859 ZNF705BP0CI00 300 aaPredicted RBP8.17□□□□□ -1.1
RNF4-216ENST00000511859 HTN3P15516 51 aa8.17□□□□□ -1.1
RNF4-216ENST00000511859 EIF2B2P49770 351 aaKnown RBP8.17□□□□□ -1.1
RNF4-216ENST00000511859 SRPXP78539 464 aa8.17□□□□□ -1.1
RNF4-216ENST00000511859 FAM222AQ5U5X8 452 aa8.17□□□□□ -1.1
RNF4-216ENST00000511859 GGNBP1Q5YKI7 109 aa8.17□□□□□ -1.1
RNF4-216ENST00000511859 C12orf45Q8N5I9 185 aaPredicted RBP8.17□□□□□ -1.1
RNF4-216ENST00000511859 COQ8AQ8NI60 647 aa8.17□□□□□ -1.1
RNF4-216ENST00000511859 IL22RA2Q969J5 263 aa8.17□□□□□ -1.1
RNF4-216ENST00000511859 ZFAND3Q9H8U3 227 aa8.17□□□□□ -1.1
RNF4-216ENST00000511859 GPN1Q9HCN4 374 aaPredicted RBP8.17□□□□□ -1.1
RNF4-216ENST00000511859 CACNG5Q9UF02 275 aa8.17□□□□□ -1.1
RNF4-216ENST00000511859 A0A0B4J2A0 478 aa8.16□□□□□ -1.1
RNF4-216ENST00000511859 FAM25EA8MYX2 175 aa8.16□□□□□ -1.1
RNF4-216ENST00000511859 IL5P05113 134 aa8.16□□□□□ -1.1
RNF4-216ENST00000511859 BTF3P20290 206 aaKnown RBP8.16□□□□□ -1.1
RNF4-216ENST00000511859 AP2S1P53680 142 aaPredicted RBP8.16□□□□□ -1.1
RNF4-216ENST00000511859 FAM219AQ8IW50 185 aa8.16□□□□□ -1.1
RNF4-216ENST00000511859 LYPD1Q8N2G4 141 aa8.16□□□□□ -1.1
RNF4-216ENST00000511859 MITD1Q8WV92 249 aa8.16□□□□□ -1.1
RNF4-216ENST00000511859 METTL26Q96S19 204 aa8.16□□□□□ -1.1
RNF4-216ENST00000511859 SHPKQ9UHJ6 478 aa8.16□□□□□ -1.1
RNF4-216ENST00000511859 PRNDQ9UKY0 176 aa8.16□□□□□ -1.1
RNF4-216ENST00000511859 ALG5Q9Y673 324 aa8.16□□□□□ -1.1
RNF4-216ENST00000511859 HELTA6NFD8 242 aa8.15□□□□□ -1.1
RNF4-216ENST00000511859 H3BMM0 161 aa8.15□□□□□ -1.1
RNF4-216ENST00000511859 PRAF2O60831 178 aa8.15□□□□□ -1.1
RNF4-216ENST00000511859 IGHV3-48P01763 117 aa8.15□□□□□ -1.1
RNF4-216ENST00000511859 SULT1A3P0DMM9 295 aa8.15□□□□□ -1.1
RNF4-216ENST00000511859 SULT1A4P0DMN0 295 aa8.15□□□□□ -1.1
RNF4-216ENST00000511859 CRYBB3P26998 211 aa8.15□□□□□ -1.1
RNF4-216ENST00000511859 P2RY1P47900 373 aa8.15□□□□□ -1.1
RNF4-216ENST00000511859 HOXA1P49639 335 aaPredicted RBP8.15□□□□□ -1.1
RNF4-216ENST00000511859 KRTAP10-2P60368 255 aa8.15□□□□□ -1.1
RNF4-216ENST00000511859 NMSQ5H8A3 153 aa8.15□□□□□ -1.1
RNF4-216ENST00000511859 PSMG4Q5JS54 123 aa8.15□□□□□ -1.1
RNF4-216ENST00000511859 GSG1LQ6UXU4 331 aa8.15□□□□□ -1.1
RNF4-216ENST00000511859 LRTM2Q8N967 370 aa8.15□□□□□ -1.1
RNF4-216ENST00000511859 ZNF114Q8NC26 417 aa8.15□□□□□ -1.1
RNF4-216ENST00000511859 OR1S1Q8NH92 325 aa8.15□□□□□ -1.1
RNF4-216ENST00000511859 FRZBQ92765 325 aa8.15□□□□□ -1.1
RNF4-216ENST00000511859 NARS2Q96I59 477 aaKnown RBP8.15□□□□□ -1.1
RNF4-216ENST00000511859 SEPSECSQ9HD40 501 aaKnown RBP8.15□□□□□ -1.1
RNF4-216ENST00000511859 UBR4Q5T4S7 5183 aa8.14□□□□□ -1.11
RNF4-216ENST00000511859 DUXBA0A1W2PPF3 345 aa8.14□□□□□ -1.11
RNF4-216ENST00000511859 SSNA1O43805 119 aa8.14□□□□□ -1.11
RNF4-216ENST00000511859 SIX6O95475 246 aa8.14□□□□□ -1.11
RNF4-216ENST00000511859 TMEM50AO95807 157 aa8.14□□□□□ -1.11
RNF4-216ENST00000511859 CCL18P55774 89 aa8.14□□□□□ -1.11
RNF4-216ENST00000511859 SNRPD3P62318 126 aaKnown RBP8.14□□□□□ -1.11
RNF4-216ENST00000511859 SMCO1Q147U7 214 aa8.14□□□□□ -1.11
RNF4-216ENST00000511859 PINX1Q96BK5 328 aaKnown RBP8.14□□□□□ -1.11
RNF4-216ENST00000511859 C18orf15Q96N68 181 aa8.14□□□□□ -1.11
RNF4-216ENST00000511859 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.14□□□□□ -1.11
RNF4-216ENST00000511859 A0A1B0GU03 582 aa8.13□□□□□ -1.11
RNF4-216ENST00000511859 C5orf51A6NDU8 294 aa8.13□□□□□ -1.11
RNF4-216ENST00000511859 GOSR2O14653 212 aa8.13□□□□□ -1.11
RNF4-216ENST00000511859 SCGB1D2O95969 90 aa8.13□□□□□ -1.11
RNF4-216ENST00000511859 HSPE1P61604 102 aaKnown RBP8.13□□□□□ -1.11
RNF4-216ENST00000511859 Q5VSD8 79 aa8.13□□□□□ -1.11
RNF4-216ENST00000511859 PDCD10Q9BUL8 212 aa8.13□□□□□ -1.11
RNF4-216ENST00000511859 GSKIPQ9P0R6 139 aa8.13□□□□□ -1.11
RNF4-216ENST00000511859 IGHV3OR16-12A0A075B7B8 117 aa8.12□□□□□ -1.11
RNF4-216ENST00000511859 CEBPZOSA8MTT3 80 aa8.12□□□□□ -1.11
RNF4-216ENST00000511859 SNRPGP15A8MWD9 76 aa8.12□□□□□ -1.11
RNF4-216ENST00000511859 DAD1P61803 113 aa8.12□□□□□ -1.11
RNF4-216ENST00000511859 ERHP84090 104 aaKnown RBP8.12□□□□□ -1.11
RNF4-216ENST00000511859 IAH1Q2TAA2 248 aaPredicted RBP8.12□□□□□ -1.11
RNF4-216ENST00000511859 MAGT1Q9H0U3 335 aa8.12□□□□□ -1.11
RNF4-216ENST00000511859 PIGBOS1A0A0B4J2F0 54 aa8.11□□□□□ -1.11
RNF4-216ENST00000511859 C7orf66A4D0T2 115 aa8.11□□□□□ -1.11
RNF4-216ENST00000511859 HBE1P02100 147 aa8.11□□□□□ -1.11
RNF4-216ENST00000511859 IAPPP10997 89 aa8.11□□□□□ -1.11
RNF4-216ENST00000511859 HLA-DRB4P13762 266 aa8.11□□□□□ -1.11
RNF4-216ENST00000511859 XGP55808 180 aa8.11□□□□□ -1.11
RNF4-216ENST00000511859 PRCDQ00LT1 54 aa8.11□□□□□ -1.11
RNF4-216ENST00000511859 ZBTB8BQ8NAP8 495 aaPredicted RBP8.11□□□□□ -1.11
RNF4-216ENST00000511859 RBKSQ9H477 322 aa8.11□□□□□ -1.11
RNF4-216ENST00000511859 ENY2Q9NPA8 101 aa8.11□□□□□ -1.11
RNF4-216ENST00000511859 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
RNF4-216ENST00000511859 MGAT4CQ9UBM8 478 aa8.11□□□□□ -1.11
RNF4-216ENST00000511859 YTHDF2Q9Y5A9 579 aaKnown RBP8.11□□□□□ -1.11
RNF4-216ENST00000511859 HLA-DRB4X5D2U9 266 aa8.11□□□□□ -1.11
RNF4-216ENST00000511859 FAM90A26D6RGX4 464 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 PITX3O75364 302 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 SCGB2A1O75556 95 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 NKX2-1P43699 371 aaPredicted RBP8.1□□□□□ -1.11
RNF4-216ENST00000511859 SPCS3P61009 180 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 TTC32Q5I0X7 151 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 MED28Q9H204 178 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 Q9H8V8 135 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 HEYLQ9NQ87 328 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms