RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 PLPP1O14494 284 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 TNFSF12O43508 249 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 IGHG1P01857 330 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 APCSP02743 223 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 P04436 131 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 CECR9P0C854 216 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 RPL35AP18077 110 aaKnown RBP3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 GATA2P23769 480 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 MPV17P39210 176 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 FXYD6P3P58550 94 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 PFN3P60673 137 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 RPS11P62280 158 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 CCL20P78556 96 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 PLGLB1Q02325 96 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 CD164Q04900 197 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 WFDC2Q14508 124 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 C4orf26Q17RF5 130 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 RRN3P1Q2M238 152 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 SPRNQ5BIV9 151 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 HSD11B1LQ7Z5J1 315 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 CLDN19Q8N6F1 224 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 TMEM99Q8N816 258 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 MORN4Q8NDC4 146 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 TSKUQ8WUA8 353 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 DLX4Q92988 240 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 FAM3DQ96BQ1 224 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 LINC00479Q96M42 142 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 C9orf85Q96MD7 179 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 ZNF488Q96MN9 340 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 PBOV1Q9GZY1 135 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 ARRDC1-AS1Q9H2J1 176 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 HIGD1BQ9P298 99 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 LAMTOR3Q9UHA4 124 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 NLRC5Q86WI3 1866 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 PLXNA3P51805 1871 aa3.65□□□□□ -1.82
HMGB3P13-201ENST00000511263 TRBV20-1A0A075B6N2 111 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 IGHV1-24A0A0C4DH33 117 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 TRBV5-5A0A0J9YX44 114 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 SPTY2D1-AS1A0A0U1RR47 76 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 H0YIG0 161 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 K7ENP7 123 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 FFAR1O14842 300 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 MPDU1O75352 247 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 IGHMP01871 453 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 CBLN1P23435 193 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 CCL11P51671 97 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 LIM2P55344 173 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 KLF5Q13887 457 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 NMSQ5H8A3 153 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 DMRTC1Q5HYR2 192 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZC2HC1BQ5TFG8 222 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 HES3Q5TGS1 186 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 TMEM207Q6UWW9 146 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 Q6ZS49 121 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 C2orf91Q6ZV80 131 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM231DQ6ZW35 169 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 PRSS41Q7RTY9 318 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 TRAPPC6BQ86SZ2 158 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 PIANPQ8IYJ0 282 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 GAPTQ8N292 157 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 ABHD12Q8N2K0 398 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 LRTM2Q8N967 370 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 NUP35Q8NFH5 326 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 PHLDA1Q8WV24 401 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 UBE2E3Q969T4 207 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 PELI1Q96FA3 418 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 SLC25A44Q96H78 314 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 BMFQ96LC9 184 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 LINC00477Q96M19 166 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 MRPL20Q9BYC9 149 aaKnown RBP3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 JPT2Q9H910 190 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 PELI2Q9HAT8 420 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 TECRQ9NZ01 308 aaKnown RBP3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 PRO0461Q9UI25 63 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 FZR1Q9UM11 496 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 ANAPC10Q9UM13 185 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 TIMM9Q9Y5J7 89 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 PTPRDP23468 1912 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 DENND4CQ5VZ89 1909 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 DNAH12Q6ZR08 3092 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 CENPFP49454 3210 aa3.65□□□□□ -1.83
HMGB3P13-201ENST00000511263 KIF26AQ9ULI4 1882 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 GREB1Q4ZG55 1949 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 TICRRQ7Z2Z1 1910 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 IGHV1OR15-9A0A0B4J2B8 117 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 LOC107984640A0A0U1RRK4 108 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 C2orf70A6NJV1 201 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 SHISA9B4DS77 424 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 NDUFC2-KCTD14E9PQ53 114 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 SDCBPO00560 298 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 PIN1P1O15428 100 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 TRACP01848 142 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 LGALS1P09382 135 aaKnown RBP3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZNF883P0CG24 379 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 CRYGAP11844 174 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 NBL1P41271 181 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 NMUP48645 174 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 PPP1CAP62136 330 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms