RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 ZFAND6Q6FIF0 208 aa3.46□□□□□ -1.86
PTPN13-208ENST00000511105 FAAP20Q6NZ36 180 aa3.46□□□□□ -1.86
PTPN13-208ENST00000511105 ZNF429Q86V71 674 aa3.46□□□□□ -1.86
PTPN13-208ENST00000511105 CLVS1Q8IUQ0 354 aaPredicted RBP3.46□□□□□ -1.86
PTPN13-208ENST00000511105 PUSL1Q8N0Z8 303 aaKnown RBP3.46□□□□□ -1.86
PTPN13-208ENST00000511105 TTC9CQ8N5M4 171 aa3.46□□□□□ -1.86
PTPN13-208ENST00000511105 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.46□□□□□ -1.86
PTPN13-208ENST00000511105 OR5H2Q8NGV7 314 aa3.46□□□□□ -1.86
PTPN13-208ENST00000511105 DCSTAMPQ9H295 470 aa3.46□□□□□ -1.86
PTPN13-208ENST00000511105 HUWE1Q7Z6Z7 4374 aaKnown RBP3.46□□□□□ -1.86
PTPN13-208ENST00000511105 IGKV3-7A0A075B6H7 116 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 SMIM31A0A1B0GVY4 71 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 UPK2O00526 184 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 GOSR2O14653 212 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 RGS5O15539 181 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 CD3DP04234 171 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 SERPINE2P07093 398 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 CD7P09564 240 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 CTXN2P0C2S0 81 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 OR13C7P0DN81 318 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 PGAM2P15259 253 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 HLA-GP17693 338 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 PSMB6P28072 239 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 CRIP2P52943 208 aaPredicted RBP3.45□□□□□ -1.86
PTPN13-208ENST00000511105 RPL32P62910 135 aaKnown RBP3.45□□□□□ -1.86
PTPN13-208ENST00000511105 RUNX1Q01196 453 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 C15orf32Q32M92 178 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 SCGB2B2Q4G0G5 96 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 ZNF343Q6P1L6 599 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 Q6ZS49 121 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 DEFB125Q8N687 156 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 UBAC2Q8NBM4 344 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 OR9G4Q8NGQ1 327 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 OR4S2Q8NH73 311 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 TMEM167AQ8TBQ9 72 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 MITD1Q8WV92 249 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 SLC25A46Q96AG3 418 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 ADTRPQ96IZ2 230 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 HSD17B10Q99714 261 aaKnown RBP3.45□□□□□ -1.86
PTPN13-208ENST00000511105 B9D2Q9BPU9 175 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 FXYD6Q9H0Q3 95 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 MIXL1Q9H2W2 232 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 VCX3AQ9NNX9 186 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 SMAD5-AS1Q9Y6J3 95 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 U3KQK5 164 aa3.45□□□□□ -1.86
PTPN13-208ENST00000511105 KMT2CQ8NEZ4 4911 aaKnown RBP3.45□□□□□ -1.86
PTPN13-208ENST00000511105 IGHV3-66A0A0C4DH42 116 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 A0A0G2JLM5 398 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 OR2T8A6NH00 312 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 HPRT1P00492 218 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 HRASP01112 189 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 IGKV1-39P01597 117 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 IGKV1D-39P04432 117 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 FOLR2P14207 255 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 NQO2P16083 231 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 NUP62P37198 522 aaPredicted RBP3.44□□□□□ -1.86
PTPN13-208ENST00000511105 ETV6P41212 452 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 RANBP1P43487 201 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 TFPI2P48307 235 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 RORCP51449 518 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 WT1-ASQ06250 92 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 ARL6IP1Q15041 203 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 TIMM50Q3ZCQ8 353 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 LEMD1Q68G75 181 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 UNQ9165/PRO28630Q6UXU0 137 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 TCTEX1D1Q8N7M0 179 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 DGCR14Q96DF8 476 aaKnown RBP3.44□□□□□ -1.86
PTPN13-208ENST00000511105 COMMD5Q9GZQ3 224 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 MFFQ9GZY8 342 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 TUBA4BQ9H853 241 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 SCRT2Q9NQ03 307 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 SLC2A9Q9NRM0 540 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 OR51B2Q9Y5P1 312 aa3.44□□□□□ -1.86
PTPN13-208ENST00000511105 RYR2Q92736 4967 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 IGHV1OR15-1A0A075B7D0 117 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.43□□□□□ -1.86
PTPN13-208ENST00000511105 A0A0G2JRQ6 117 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 CCDC160A6NGH7 325 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 GPR31O00270 319 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 SLC22A5O76082 557 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 YIF1AO95070 293 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 IGLV1-51P01701 117 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 IFNA6P05013 189 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 TRAPPC2P0DI81 140 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 TRAPPC2BP0DI82 140 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 CTRB1P17538 263 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 SLC6A1P30531 599 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 CBX5P45973 191 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 CD300CQ08708 224 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 CATR1Q13166 79 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 DEFB114Q30KQ6 69 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 Q56UQ5 140 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 CTRB2Q6GPI1 263 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 ZNF600Q6ZNG1 722 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 OR6Q1Q8NGQ2 317 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 DYNLRB2Q8TF09 96 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 DIRAS2Q96HU8 199 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 USMG5Q96IX5 58 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 SPIN2AQ99865 258 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms