RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 OR10G8Q8NGN5 311 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 C17orf77Q96MU5 243 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 SPOCK3Q9BQ16 436 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 C1RLQ9NZP8 487 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 FBXL7Q9UJT9 491 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 IGHV1-69DA0A0B4J2H0 117 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 C5orf52A6NGY3 159 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 PCP4L1A6NKN8 68 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 VWC2LB2RUY7 222 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 PPP5D1E7EU14 171 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 CA1P00915 261 aaPredicted RBP11.69□□□□□ -0.54
PHF3-209ENST00000509330 IGHV1-69P01742 117 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 ZNF600Q6ZNG1 722 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 EXOC3-AS1Q8N2X6 119 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 SERTAD4Q9NUC0 356 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 KLF2Q9Y5W3 355 aaPredicted RBP11.69□□□□□ -0.54
PHF3-209ENST00000509330 ZNF469Q96JG9 3925 aaPredicted RBP11.68□□□□□ -0.54
PHF3-209ENST00000509330 ZNF320A2RRD8 509 aa11.68□□□□□ -0.54
PHF3-209ENST00000509330 C21orf62Q9NYP8 219 aa11.68□□□□□ -0.54
PHF3-209ENST00000509330 TENM4Q6N022 2769 aa11.68□□□□□ -0.54
PHF3-209ENST00000509330 ISLRO14498 428 aa11.68□□□□□ -0.54
PHF3-209ENST00000509330 MSMBP08118 114 aa11.68□□□□□ -0.54
PHF3-209ENST00000509330 USF2Q15853 346 aaPredicted RBP11.68□□□□□ -0.54
PHF3-209ENST00000509330 HIST2H2BCQ6DN03 193 aa11.68□□□□□ -0.54
PHF3-209ENST00000509330 CREBBPQ92793 2442 aa11.68□□□□□ -0.54
PHF3-209ENST00000509330 TRBV24-1A0A075B6N3 115 aa11.67□□□□□ -0.54
PHF3-209ENST00000509330 GP9P14770 177 aa11.67□□□□□ -0.54
PHF3-209ENST00000509330 RNF125Q96EQ8 232 aa11.67□□□□□ -0.54
PHF3-209ENST00000509330 NPIPB5A8MRT5 1133 aa11.67□□□□□ -0.54
PHF3-209ENST00000509330 F8W735 103 aaPredicted RBP11.67□□□□□ -0.54
PHF3-209ENST00000509330 PEX7O00628 323 aa11.67□□□□□ -0.54
PHF3-209ENST00000509330 FRMD6-AS1P0C7T7 363 aa11.67□□□□□ -0.54
PHF3-209ENST00000509330 GPR183P32249 361 aa11.67□□□□□ -0.54
PHF3-209ENST00000509330 TTC9CQ8N5M4 171 aa11.67□□□□□ -0.54
PHF3-209ENST00000509330 ZNF491Q8N8L2 437 aa11.67□□□□□ -0.54
PHF3-209ENST00000509330 SRSF8Q9BRL6 282 aaKnown RBP11.67□□□□□ -0.54
PHF3-209ENST00000509330 CHRDL1Q9BU40 450 aa11.67□□□□□ -0.54
PHF3-209ENST00000509330 GNB4Q9HAV0 340 aa11.67□□□□□ -0.54
PHF3-209ENST00000509330 AP4M1O00189 453 aa11.67□□□□□ -0.54
PHF3-209ENST00000509330 MFAP4P55083 255 aa11.67□□□□□ -0.54
PHF3-209ENST00000509330 C15orf32Q32M92 178 aa11.67□□□□□ -0.54
PHF3-209ENST00000509330 Q71RC1 249 aaPredicted RBP11.67□□□□□ -0.54
PHF3-209ENST00000509330 IGHV3OR16-13A0A075B7E8 117 aa11.66□□□□□ -0.54
PHF3-209ENST00000509330 TRAV8-1A0A0A6YYK1 113 aa11.66□□□□□ -0.54
PHF3-209ENST00000509330 IGHV3-74A0A0B4J1X5 117 aa11.66□□□□□ -0.54
PHF3-209ENST00000509330 KCNIP4Q6PIL6 250 aa11.66□□□□□ -0.54
PHF3-209ENST00000509330 ZNF586Q9NXT0 402 aa11.66□□□□□ -0.54
PHF3-209ENST00000509330 H3BUX3 64 aa11.66□□□□□ -0.54
PHF3-209ENST00000509330 NDUFS8O00217 210 aa11.66□□□□□ -0.54
PHF3-209ENST00000509330 HLA-DRB1P01911 266 aa11.66□□□□□ -0.54
PHF3-209ENST00000509330 PRR31Q5SQ13 230 aa11.66□□□□□ -0.54
PHF3-209ENST00000509330 Q9H3A6 140 aa11.66□□□□□ -0.54
PHF3-209ENST00000509330 CNN1P51911 297 aaKnown RBP11.65□□□□□ -0.54
PHF3-209ENST00000509330 RHOGP84095 191 aa11.65□□□□□ -0.54
PHF3-209ENST00000509330 IGHV3-66A0A0C4DH42 116 aa11.65□□□□□ -0.54
PHF3-209ENST00000509330 C5orf56Q8N8D9 126 aa11.65□□□□□ -0.54
PHF3-209ENST00000509330 C9JCJ5 164 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 IGLV2-8P01709 118 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 HIST1H1BP16401 226 aaKnown RBP11.64□□□□□ -0.55
PHF3-209ENST00000509330 BAGE2Q86Y30 109 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 PIFOQ8TCI5 191 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 THYN1Q9P016 225 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 APCP25054 2843 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 IGHV3-49A0A0A0MS15 119 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 RPL15P61313 204 aaKnown RBP11.64□□□□□ -0.55
PHF3-209ENST00000509330 UBE2G1P62253 170 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 OR8I2Q8N0Y5 310 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 OR1L6Q8NGR2 347 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 IGF2BP2-AS1Q96M15 143 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 NOL4LQ96MY1 436 aaPredicted RBP11.64□□□□□ -0.55
PHF3-209ENST00000509330 MRPL27Q9P0M9 148 aaKnown RBP11.64□□□□□ -0.55
PHF3-209ENST00000509330 SONP18583 2426 aaKnown RBP11.64□□□□□ -0.55
PHF3-209ENST00000509330 RNF223E7ERA6 249 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 TOMM40O96008 361 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 CLEC19AQ6UXS0 136 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 IMMP2LQ96T52 175 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 SRD5A3Q9H8P0 318 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 EPDR1Q9UM22 224 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 ARL2-SNX15V9GYD0 113 aa11.64□□□□□ -0.55
PHF3-209ENST00000509330 TEX15Q9BXT5 2789 aa11.63□□□□□ -0.55
PHF3-209ENST00000509330 UBE2CO00762 179 aa11.63□□□□□ -0.55
PHF3-209ENST00000509330 CLEC3BP05452 202 aa11.63□□□□□ -0.55
PHF3-209ENST00000509330 SRP14P37108 136 aaKnown RBP11.63□□□□□ -0.55
PHF3-209ENST00000509330 LCNL1Q6ZST4 164 aa11.63□□□□□ -0.55
PHF3-209ENST00000509330 STXBP6Q8NFX7 210 aa11.63□□□□□ -0.55
PHF3-209ENST00000509330 ZNF207O43670 478 aaKnown RBP11.63□□□□□ -0.55
PHF3-209ENST00000509330 GGCTO75223 188 aaKnown RBP11.63□□□□□ -0.55
PHF3-209ENST00000509330 TGFAP01135 160 aa11.63□□□□□ -0.55
PHF3-209ENST00000509330 AMY1AP04745 511 aa11.63□□□□□ -0.55
PHF3-209ENST00000509330 ADMP35318 185 aa11.63□□□□□ -0.55
PHF3-209ENST00000509330 PLP1P60201 277 aa11.63□□□□□ -0.55
PHF3-209ENST00000509330 IBA57Q5T440 356 aaKnown RBP11.63□□□□□ -0.55
PHF3-209ENST00000509330 IGFL4Q6B9Z1 124 aa11.63□□□□□ -0.55
PHF3-209ENST00000509330 Q6ZS46 218 aa11.63□□□□□ -0.55
PHF3-209ENST00000509330 LINC00518Q8N0U6 118 aa11.63□□□□□ -0.55
PHF3-209ENST00000509330 C12orf57Q99622 126 aa11.63□□□□□ -0.55
PHF3-209ENST00000509330 POLR3KQ9Y2Y1 108 aaPredicted RBP11.63□□□□□ -0.55
PHF3-209ENST00000509330 CTSGP08311 255 aa11.62□□□□□ -0.55
PHF3-209ENST00000509330 CBLN1P23435 193 aa11.62□□□□□ -0.55
PHF3-209ENST00000509330 GPR61Q9BZJ8 451 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms