RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 OR8B3Q8NGG8 313 aa1.95□□□□□ -2.1
DHFR-204ENST00000508282 NPCDR1Q9BY65 106 aa1.95□□□□□ -2.1
DHFR-204ENST00000508282 MED31Q9Y3C7 131 aa1.95□□□□□ -2.1
DHFR-204ENST00000508282 MYH10P35580 1976 aa1.95□□□□□ -2.1
DHFR-204ENST00000508282 NUP98P52948 1817 aa1.95□□□□□ -2.1
DHFR-204ENST00000508282 N4BP2Q86UW6 1770 aaPredicted RBP1.95□□□□□ -2.1
DHFR-204ENST00000508282 SCN8AQ9UQD0 1980 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 XIRP1Q702N8 1843 aaKnown RBP1.94□□□□□ -2.1
DHFR-204ENST00000508282 PIK3C2AO00443 1686 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 TRAV5A0A0B4J249 113 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 GABARAPH6UMI1 98 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 H7BYZ3 331 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 DEGS1O15121 323 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 PGLYRP1O75594 196 aaPredicted RBP1.94□□□□□ -2.1
DHFR-204ENST00000508282 SHBGP04278 402 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 CXCL1P09341 107 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 HLA-EP13747 358 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 RPS3P23396 243 aaKnown RBP eCLIP1.94□□□□□ -2.13e-32■■■□□ 17.4
DHFR-204ENST00000508282 ARPP19P56211 112 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 SLC38A11Q08AI6 406 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 EIF3IQ13347 325 aaKnown RBP1.94□□□□□ -2.1
DHFR-204ENST00000508282 ZNF345Q14585 488 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 NNATQ16517 81 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 CCDC153Q494R4 210 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 HRCT1Q6UXD1 115 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 Q6ZQT0 140 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 LINC00471Q8N535 108 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 OR4D11Q8NGI4 311 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 BORCS5Q969J3 196 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 CARD19Q96LW7 228 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 ZNF714Q96N38 554 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 OR2H1Q9GZK4 316 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 TCEAL2Q9H3H9 227 aaPredicted RBP1.94□□□□□ -2.1
DHFR-204ENST00000508282 OTORQ9NRC9 128 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 JPT1Q9UK76 154 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 TRAPPC2LQ9UL33 140 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 SBF1O95248 1867 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 ANKRD31Q8N7Z5 1873 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 ARAP1Q96P48 1450 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 CEP164Q9UPV0 1460 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 MPDZO75970 2070 aa1.94□□□□□ -2.1
DHFR-204ENST00000508282 ADAMTS7Q9UKP4 1686 aa1.93□□□□□ -2.1
DHFR-204ENST00000508282 CCDC88CQ9P219 2028 aa1.93□□□□□ -2.1
DHFR-204ENST00000508282 BCL9O00512 1426 aa1.93□□□□□ -2.1
DHFR-204ENST00000508282 HIST1H2BKO60814 126 aa1.93□□□□□ -2.1
DHFR-204ENST00000508282 HIST1H2BJP06899 126 aa1.93□□□□□ -2.1
DHFR-204ENST00000508282 CTSDP07339 412 aaPredicted RBP1.93□□□□□ -2.1
DHFR-204ENST00000508282 FKBP2P26885 142 aaKnown RBP1.93□□□□□ -2.1
DHFR-204ENST00000508282 NDUFA6P56556 154 aa1.93□□□□□ -2.1
DHFR-204ENST00000508282 RPS28P62857 69 aaKnown RBP1.93□□□□□ -2.1
DHFR-204ENST00000508282 OR8B8Q15620 311 aa1.93□□□□□ -2.1
DHFR-204ENST00000508282 MSMO1Q15800 293 aa1.93□□□□□ -2.1
DHFR-204ENST00000508282 SPANXN5Q5MJ07 72 aa1.93□□□□□ -2.1
DHFR-204ENST00000508282 LINC00467Q9BRT7 94 aa1.93□□□□□ -2.1
DHFR-204ENST00000508282 BCL2L10Q9HD36 194 aa1.93□□□□□ -2.1
DHFR-204ENST00000508282 TMEM138Q9NPI0 162 aa1.93□□□□□ -2.1
DHFR-204ENST00000508282 TAS2R4Q9NYW5 299 aa1.93□□□□□ -2.1
DHFR-204ENST00000508282 NAT8BQ9UHF3 227 aa1.93□□□□□ -2.1
DHFR-204ENST00000508282 HS3ST2Q9Y278 367 aa1.93□□□□□ -2.1
DHFR-204ENST00000508282 TAF1LQ8IZX4 1826 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 IGKV1D-42A0A075B6H8 117 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 IGLV3-9A0A075B6K5 115 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 TRAV36DV7A0A075B6V5 113 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 BORCS7-ASMTA0A0B4J1R7 106 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 TRGV4A0A0C4DH28 118 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 A0A0G2JQZ4 141 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 A0A1B0GX51 115 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 LY6LH3BQJ8 138 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 OVOL1O14753 267 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 TIMM17BO60830 172 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 LYZL6O75951 148 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 NAPSAO96009 420 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 IFNA4P05014 189 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 FABP2P12104 132 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 SDC2P34741 201 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 RPL35P42766 123 aaKnown RBP1.92□□□□□ -2.1
DHFR-204ENST00000508282 HBBP68871 147 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 ZNF826PQ6ZT77 177 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 C3orf56Q8N813 242 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 TMEM229BQ8NBD8 167 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 OR5D16Q8NGK9 328 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 TIMM21Q9BVV7 248 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 FAM107BQ9H098 131 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 RASL12Q9NYN1 266 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 RNF11Q9Y3C5 154 aa1.92□□□□□ -2.1
DHFR-204ENST00000508282 TRAPPC8Q9Y2L5 1435 aa1.91□□□□□ -2.1
DHFR-204ENST00000508282 NCKAP5O14513 1909 aa1.91□□□□□ -2.1
DHFR-204ENST00000508282 CUL9Q8IWT3 2517 aa1.91□□□□□ -2.1
DHFR-204ENST00000508282 A0A087WX48 190 aa1.91□□□□□ -2.1
DHFR-204ENST00000508282 ZNF705FA8MVS1 300 aaPredicted RBP1.91□□□□□ -2.1
DHFR-204ENST00000508282 A8MWV9 139 aa1.91□□□□□ -2.1
DHFR-204ENST00000508282 IBA57-AS1B1ANH7 110 aa1.91□□□□□ -2.1
DHFR-204ENST00000508282 K7ERJ3 54 aa1.91□□□□□ -2.1
DHFR-204ENST00000508282 DBIP07108 87 aaKnown RBP1.91□□□□□ -2.1
DHFR-204ENST00000508282 ZNF705BP0CI00 300 aaPredicted RBP1.91□□□□□ -2.1
DHFR-204ENST00000508282 MGST1P10620 155 aaKnown RBP1.91□□□□□ -2.1
DHFR-204ENST00000508282 ESRGQ1W209 222 aa1.91□□□□□ -2.1
DHFR-204ENST00000508282 TMEM155Q4W5P6 130 aa1.91□□□□□ -2.1
DHFR-204ENST00000508282 OR8I2Q8N0Y5 310 aa1.91□□□□□ -2.1
DHFR-204ENST00000508282 LXNQ9BS40 222 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms