RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 NKX2-1P43699 371 aaPredicted RBP6.39□□□□□ -1.39
CAST-220ENST00000508117 CCR6P51684 374 aa6.39□□□□□ -1.39
CAST-220ENST00000508117 XGP55808 180 aa6.39□□□□□ -1.39
CAST-220ENST00000508117 HERV-K104P61576 105 aa6.39□□□□□ -1.39
CAST-220ENST00000508117 HSPE1P61604 102 aaKnown RBP6.39□□□□□ -1.39
CAST-220ENST00000508117 SURF2Q15527 256 aaPredicted RBP6.39□□□□□ -1.39
CAST-220ENST00000508117 SCGB2B2Q4G0G5 96 aa6.39□□□□□ -1.39
CAST-220ENST00000508117 TTC32Q5I0X7 151 aa6.39□□□□□ -1.39
CAST-220ENST00000508117 OR4X1Q8NH49 305 aa6.39□□□□□ -1.39
CAST-220ENST00000508117 FRZBQ92765 325 aa6.39□□□□□ -1.39
CAST-220ENST00000508117 MRGPRFQ96AM1 343 aa6.39□□□□□ -1.39
CAST-220ENST00000508117 SLC25A21Q9BQT8 299 aaPredicted RBP6.39□□□□□ -1.39
CAST-220ENST00000508117 NRN1Q9NPD7 142 aa6.39□□□□□ -1.39
CAST-220ENST00000508117 NUDT15Q9NV35 164 aa6.39□□□□□ -1.39
CAST-220ENST00000508117 YTHDF2Q9Y5A9 579 aaKnown RBP6.39□□□□□ -1.39
CAST-220ENST00000508117 TRAV30A0A087WSZ9 112 aa6.38□□□□□ -1.39
CAST-220ENST00000508117 LOC102723971A0A1B0GUV8 181 aa6.38□□□□□ -1.39
CAST-220ENST00000508117 A0A1W2PPQ1 181 aa6.38□□□□□ -1.39
CAST-220ENST00000508117 NPIPB6E9PJ23 425 aa6.38□□□□□ -1.39
CAST-220ENST00000508117 HBE1P02100 147 aa6.38□□□□□ -1.39
CAST-220ENST00000508117 TCRBP04435 133 aa6.38□□□□□ -1.39
CAST-220ENST00000508117 RLN1P04808 185 aa6.38□□□□□ -1.39
CAST-220ENST00000508117 RRN3P1Q2M238 152 aa6.38□□□□□ -1.39
CAST-220ENST00000508117 DHRS11Q6UWP2 260 aa6.38□□□□□ -1.39
CAST-220ENST00000508117 Q6ZNX1 250 aa6.38□□□□□ -1.39
CAST-220ENST00000508117 TMEM230Q96A57 120 aa6.38□□□□□ -1.39
CAST-220ENST00000508117 SEC22AQ96IW7 307 aa6.38□□□□□ -1.39
CAST-220ENST00000508117 ZNF2Q9BSG1 426 aaPredicted RBP6.38□□□□□ -1.39
CAST-220ENST00000508117 MARVELD1Q9BSK0 173 aa6.38□□□□□ -1.39
CAST-220ENST00000508117 Q9H8V8 135 aa6.38□□□□□ -1.39
CAST-220ENST00000508117 GOLT1BQ9Y3E0 138 aa6.38□□□□□ -1.39
CAST-220ENST00000508117 LINC00588Q9Y4M8 146 aa6.38□□□□□ -1.39
CAST-220ENST00000508117 IGHV3OR16-12A0A075B7B8 117 aa6.37□□□□□ -1.39
CAST-220ENST00000508117 A0A0B4J293 547 aa6.37□□□□□ -1.39
CAST-220ENST00000508117 C7orf66A4D0T2 115 aa6.37□□□□□ -1.39
CAST-220ENST00000508117 PRAF2O60831 178 aa6.37□□□□□ -1.39
CAST-220ENST00000508117 IGKV1-17P01599 117 aa6.37□□□□□ -1.39
CAST-220ENST00000508117 HNRNPCP07910 306 aaKnown RBP eCLIP6.37□□□□□ -1.39
CAST-220ENST00000508117 SNCAP37840 140 aa6.37□□□□□ -1.39
CAST-220ENST00000508117 SUB1P53999 127 aaKnown RBP eCLIP6.37□□□□□ -1.39
CAST-220ENST00000508117 UCP3P55916 312 aa6.37□□□□□ -1.39
CAST-220ENST00000508117 UBE2MP61081 183 aaKnown RBP6.37□□□□□ -1.39
CAST-220ENST00000508117 TSPAN5P62079 268 aa6.37□□□□□ -1.39
CAST-220ENST00000508117 SPATA31B1PQ5VZV4 182 aa6.37□□□□□ -1.39
CAST-220ENST00000508117 CMTM1Q8IZ96 169 aa6.37□□□□□ -1.39
CAST-220ENST00000508117 ZNF709Q8N972 641 aa6.37□□□□□ -1.39
CAST-220ENST00000508117 OR6F1Q8NGZ6 308 aa6.37□□□□□ -1.39
CAST-220ENST00000508117 OR4A16Q8NH70 328 aa6.37□□□□□ -1.39
CAST-220ENST00000508117 ZNF486Q96H40 463 aaPredicted RBP6.37□□□□□ -1.39
CAST-220ENST00000508117 SCGB3A2Q96PL1 93 aa6.37□□□□□ -1.39
CAST-220ENST00000508117 Q9H3A6 140 aa6.37□□□□□ -1.39
CAST-220ENST00000508117 SAV1Q9H4B6 383 aaPredicted RBP6.37□□□□□ -1.39
CAST-220ENST00000508117 TRAV6A0A075B6T7 132 aa6.36□□□□□ -1.39
CAST-220ENST00000508117 LYRM9A8MSI8 78 aa6.36□□□□□ -1.39
CAST-220ENST00000508117 INMT-MINDY4F8WBC2 141 aa6.36□□□□□ -1.39
CAST-220ENST00000508117 FOXI2Q6ZQN5 318 aa6.36□□□□□ -1.39
CAST-220ENST00000508117 H2BFWTQ7Z2G1 175 aa6.36□□□□□ -1.39
CAST-220ENST00000508117 C1orf158Q8N1D5 194 aa6.36□□□□□ -1.39
CAST-220ENST00000508117 TERB2Q8NHR7 220 aa6.36□□□□□ -1.39
CAST-220ENST00000508117 MARCH1Q8TCQ1 289 aa6.36□□□□□ -1.39
CAST-220ENST00000508117 KRTAP1-5Q9BYS1 174 aa6.36□□□□□ -1.39
CAST-220ENST00000508117 FNDC4Q9H6D8 234 aaPredicted RBP6.36□□□□□ -1.39
CAST-220ENST00000508117 MRPL36Q9P0J6 103 aaKnown RBP6.36□□□□□ -1.39
CAST-220ENST00000508117 C14orf166Q9Y224 244 aaKnown RBP6.36□□□□□ -1.39
CAST-220ENST00000508117 RPS10-NUDT3A0A1W2PQS6 291 aa6.35□□□□□ -1.39
CAST-220ENST00000508117 GPR31O00270 319 aa6.35□□□□□ -1.39
CAST-220ENST00000508117 BUB3O43684 328 aa6.35□□□□□ -1.39
CAST-220ENST00000508117 NUDT3O95989 172 aa6.35□□□□□ -1.39
CAST-220ENST00000508117 IL5P05113 134 aa6.35□□□□□ -1.39
CAST-220ENST00000508117 RNASE2P10153 161 aaKnown RBP6.35□□□□□ -1.39
CAST-220ENST00000508117 PGAM2P15259 253 aa6.35□□□□□ -1.39
CAST-220ENST00000508117 PAX9P55771 341 aa6.35□□□□□ -1.39
CAST-220ENST00000508117 YPEL3P61236 119 aaPredicted RBP6.35□□□□□ -1.39
CAST-220ENST00000508117 RND3P61587 244 aa6.35□□□□□ -1.39
CAST-220ENST00000508117 USF2Q15853 346 aaPredicted RBP6.35□□□□□ -1.39
CAST-220ENST00000508117 GDF5OSQ5U4N7 250 aa6.35□□□□□ -1.39
CAST-220ENST00000508117 SIGLEC15Q6ZMC9 328 aa6.35□□□□□ -1.39
CAST-220ENST00000508117 SSX7Q7RTT5 188 aa6.35□□□□□ -1.39
CAST-220ENST00000508117 CCDC71LQ8N9Z2 235 aa6.35□□□□□ -1.39
CAST-220ENST00000508117 ZFAND1Q8TCF1 268 aa6.35□□□□□ -1.39
CAST-220ENST00000508117 UPK3BQ9BT76 320 aa6.35□□□□□ -1.39
CAST-220ENST00000508117 GPR132Q9UNW8 380 aa6.35□□□□□ -1.39
CAST-220ENST00000508117 ALG5Q9Y673 324 aa6.35□□□□□ -1.39
CAST-220ENST00000508117 CRYM-AS1A6NIL9 109 aa6.34□□□□□ -1.39
CAST-220ENST00000508117 IGKV1-39P01597 117 aa6.34□□□□□ -1.39
CAST-220ENST00000508117 IGKV1D-39P04432 117 aa6.34□□□□□ -1.39
CAST-220ENST00000508117 IGLC1P0CG04 106 aa6.34□□□□□ -1.39
CAST-220ENST00000508117 ANXA7P20073 488 aaKnown RBP6.34□□□□□ -1.39
CAST-220ENST00000508117 TSPOP30536 169 aa6.34□□□□□ -1.39
CAST-220ENST00000508117 OPRK1P41145 380 aa6.34□□□□□ -1.39
CAST-220ENST00000508117 FXYD7P58549 80 aa6.34□□□□□ -1.39
CAST-220ENST00000508117 PSG9Q00887 426 aa6.34□□□□□ -1.39
CAST-220ENST00000508117 BSXQ3C1V8 233 aa6.34□□□□□ -1.39
CAST-220ENST00000508117 TIGITQ495A1 244 aa6.34□□□□□ -1.39
CAST-220ENST00000508117 LPCAT3Q6P1A2 487 aa6.34□□□□□ -1.39
CAST-220ENST00000508117 TMED4Q7Z7H5 227 aa6.34□□□□□ -1.39
CAST-220ENST00000508117 OR1S2Q8NGQ3 325 aa6.34□□□□□ -1.39
CAST-220ENST00000508117 Q8WTZ3 238 aa6.34□□□□□ -1.39
CAST-220ENST00000508117 FLVCR2Q9UPI3 526 aa6.34□□□□□ -1.39
CAST-220ENST00000508117 VPS13BQ7Z7G8 4022 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms