RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 TAS2R45P59539 299 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 RPL8P62917 257 aaKnown RBP3.28□□□□□ -1.88
RFC1-208ENST00000504849 ZNF816Q0VGE8 651 aaPredicted RBP3.28□□□□□ -1.88
RFC1-208ENST00000504849 GABRA6Q16445 453 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 MRPL23Q16540 153 aaKnown RBP3.28□□□□□ -1.88
RFC1-208ENST00000504849 IZUMO4Q1ZYL8 232 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 ZNF585BQ52M93 769 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 SLC35E4Q6ICL7 350 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 Q6ZS52 159 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 SLC25A48Q6ZT89 311 aaKnown RBP3.28□□□□□ -1.88
RFC1-208ENST00000504849 DRAM1Q8N682 238 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 STPG4Q8N801 248 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 C8orf31Q8N9H6 132 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 OR52E5Q8NH55 327 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 OR10D3Q8NH80 312 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 MRGPRDQ8TDS7 321 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 APH1AQ96BI3 265 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 FAM103A1Q9BTL3 118 aaKnown RBP3.28□□□□□ -1.88
RFC1-208ENST00000504849 COMMD5Q9GZQ3 224 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 OR2D2Q9H210 308 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 PPDPFQ9H3Y8 114 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 SH2D2AQ9NP31 389 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 ZNF331Q9NQX6 463 aaPredicted RBP3.28□□□□□ -1.88
RFC1-208ENST00000504849 OSTCQ9NRP0 149 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 MRPL27Q9P0M9 148 aaKnown RBP3.28□□□□□ -1.88
RFC1-208ENST00000504849 NAT8BQ9UHF3 227 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 BOKQ9UMX3 212 aaPredicted RBP3.28□□□□□ -1.88
RFC1-208ENST00000504849 LAMTOR2Q9Y2Q5 125 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 CFAP46Q8IYW2 2715 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 PTPRSQ13332 1948 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 UBR5O95071 2799 aaPredicted RBP3.28□□□□□ -1.89
RFC1-208ENST00000504849 SPTA1P02549 2419 aa3.28□□□□□ -1.89
RFC1-208ENST00000504849 HEATR5AQ86XA9 2040 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 IGSF10Q6WRI0 2623 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 LOC400499M0QZD8 3231 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 EML5Q05BV3 1969 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 TRAV30A0A087WSZ9 112 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 TRGV8A0A0C4DH27 118 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 IGHV1-69-2A0A0G2JMI3 117 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 DPRXA6NFQ7 191 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 PMS2P5A8MQ11 134 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 FNDC10F2Z333 226 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 G3V3Y1 287 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 ZG16O60844 167 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 SS18L1O75177 396 aaPredicted RBP3.27□□□□□ -1.89
RFC1-208ENST00000504849 HYPMO75409 117 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 ZNF324O75467 553 aaPredicted RBP3.27□□□□□ -1.89
RFC1-208ENST00000504849 OR2H2O95918 312 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 HAND1O96004 215 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 APCSP02743 223 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 LINC00869P0C866 280 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 ARL14EPLP0DKL9 152 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 IGLC2P0DOY2 106 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 IGLC3P0DOY3 106 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 COX6A1P12074 109 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 NPPCP23582 126 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 GDF1P27539 372 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 GCHFRP30047 84 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 GNG10P50151 68 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 EDDM3BP56851 147 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 VAMP3Q15836 100 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 TBC1D28Q2M2D7 210 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 HLA-BQ31612 363 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 ZNF718Q3SXZ3 478 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 ZNF672Q499Z4 452 aaPredicted RBP3.27□□□□□ -1.89
RFC1-208ENST00000504849 MORN2Q502X0 79 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 Q6P435 159 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 TCF23Q7RTU1 214 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 DEFB119Q8N690 84 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 TMEM178AQ8NBL3 297 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 ZNF596Q8TC21 504 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 IMMP1LQ96LU5 166 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 C19orf24Q9BVV8 132 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 FGF23Q9GZV9 251 aaPredicted RBP3.27□□□□□ -1.89
RFC1-208ENST00000504849 UBE2ZQ9H832 354 aaPredicted RBP3.27□□□□□ -1.89
RFC1-208ENST00000504849 NPVFQ9HCQ7 196 aa3.27□□□□□ -1.89
RFC1-208ENST00000504849 ZNF71Q9NQZ8 489 aaPredicted RBP3.27□□□□□ -1.89
RFC1-208ENST00000504849 TBL2Q9Y4P3 447 aaKnown RBP3.27□□□□□ -1.89
RFC1-208ENST00000504849 SPTAN1Q13813 2472 aaKnown RBP3.27□□□□□ -1.89
RFC1-208ENST00000504849 FBN2P35556 2912 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 CEP295Q9C0D2 2601 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 TRAV9-2A0A087WT02 112 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 IGHV2-26A0A0B4J1V2 119 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 TRAV38-1A0A0B4J264 116 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 IGHV5-10-1A0A0J9YXX1 117 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 IZUMO1RA6ND01 250 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 ISLRO14498 428 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 RBFOX2O43251 390 aaKnown RBP eCLIP3.26□□□□□ -1.89
RFC1-208ENST00000504849 NUPR1O60356 82 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 HSBP1O75506 76 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 TNFSF15O95150 251 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 NXPH4O95158 308 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 PPBPP02775 128 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 OR9G9P0C7N8 305 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 USF1P22415 310 aaPredicted RBP3.26□□□□□ -1.89
RFC1-208ENST00000504849 SRIP30626 198 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 CTRLP40313 264 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 DSCR9P59020 149 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 UBE2G1P62253 170 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 RPL31P62899 125 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms