RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 YPEL3P61236 119 aaPredicted RBP2.63□□□□□ -1.99
SNX13-211ENST00000496855 HIST1H4AP62805 103 aaKnown RBP2.63□□□□□ -1.99
SNX13-211ENST00000496855 EIF5AP63241 154 aaKnown RBP2.63□□□□□ -1.99
SNX13-211ENST00000496855 AKR1C1Q04828 323 aa2.63□□□□□ -1.99
SNX13-211ENST00000496855 VMA21Q3ZAQ7 101 aa2.63□□□□□ -1.99
SNX13-211ENST00000496855 TMEM244Q5VVB8 128 aa2.63□□□□□ -1.99
SNX13-211ENST00000496855 IGFL1Q6UW32 110 aa2.63□□□□□ -1.99
SNX13-211ENST00000496855 TMEM14EPQ6UXP3 125 aa2.63□□□□□ -1.99
SNX13-211ENST00000496855 DEFB132Q7Z7B7 95 aa2.63□□□□□ -1.99
SNX13-211ENST00000496855 SIGLECL1Q8N7X8 197 aa2.63□□□□□ -1.99
SNX13-211ENST00000496855 PPTC7Q8NI37 304 aa2.63□□□□□ -1.99
SNX13-211ENST00000496855 MIEN1Q9BRT3 115 aa2.63□□□□□ -1.99
SNX13-211ENST00000496855 CBLN4Q9NTU7 201 aa2.63□□□□□ -1.99
SNX13-211ENST00000496855 ERG28Q9UKR5 140 aa2.63□□□□□ -1.99
SNX13-211ENST00000496855 ECM29Q5VYK3 1845 aa2.63□□□□□ -1.99
SNX13-211ENST00000496855 NWD1Q149M9 1564 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 PLA2R1Q13018 1463 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 OVOS2A0A0J9YW53 1432 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 OVOS2Q6IE36 1432 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 CCDC88AQ3V6T2 1871 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 IGLV3-12A0A075B6K2 115 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 TRAV5A0A0B4J249 113 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 A0A0J9YW62 118 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 TRBV7-6A0A0J9YX20 115 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 C11orf86A6NJI1 115 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 C3orf84H3BNL1 204 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 RPL36A-HNRNPH2H7BZ11 118 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 C19orf84I3L1E1 186 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 UBFD1O14562 309 aaKnown RBP2.62□□□□□ -1.99
SNX13-211ENST00000496855 SHBGP04278 402 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 EVI2AP22794 236 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 RAB5CP51148 216 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 BCL2L15Q5TBC7 163 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 SOSTDC1Q6X4U4 206 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 DYNAPQ8N1N2 210 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 TEX29Q8N6K0 151 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 SCGB3A1Q96QR1 104 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 HIST1H2BLQ99880 126 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 PRADC1Q9BSG0 188 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 NIT2Q9NQR4 276 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 OR5AC2Q9NZP5 309 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 R4GN34 69 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 RNF17Q9BXT8 1623 aaKnown RBP2.62□□□□□ -1.99
SNX13-211ENST00000496855 EML6Q6ZMW3 1958 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 BAHCC1Q9P281 2608 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 CAMSAP2Q08AD1 1489 aa2.62□□□□□ -1.99
SNX13-211ENST00000496855 IGHV1-58A0A0C4DH39 117 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 H3BPC8 53 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 DPM2O94777 84 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 CLPSP04118 112 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 SDC2P34741 201 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 HBBP68871 147 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 C22orf39Q6P5X5 142 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 LYZL1Q6UWQ5 148 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 TRAPPC6BQ86SZ2 158 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 MSRB3Q8IXL7 192 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 SLC30A7Q8NEW0 376 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 TNFSF18Q9UNG2 199 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 BAIAP2Q9UQB8 552 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 FAM215AQ9Y5M1 114 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 UBR2Q8IWV8 1755 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 GRIN2AQ12879 1464 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 HEATR5AQ86XA9 2040 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 COL6A3P12111 3177 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 PRG4Q92954 1404 aaPredicted RBP2.61□□□□□ -1.99
SNX13-211ENST00000496855 TRAPPC8Q9Y2L5 1435 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 ROCK2O75116 1388 aaKnown RBP2.61□□□□□ -1.99
SNX13-211ENST00000496855 COL1A2P08123 1366 aa2.61□□□□□ -1.99
SNX13-211ENST00000496855 MEIS3P1A6NDR6 274 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 GNG7O60262 68 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 GGCTO75223 188 aaKnown RBP2.6□□□□□ -1.99
SNX13-211ENST00000496855 UCHL1P09936 223 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 LINC00694P0DN24 101 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 FABP2P12104 132 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 EIF2B2P49770 351 aaKnown RBP2.6□□□□□ -1.99
SNX13-211ENST00000496855 TAF9Q16594 264 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 AMMECR1LQ6DCA0 310 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 PATE2Q6UY27 113 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 CROCCP2Q86T23 111 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 PDZD9Q8IXQ8 264 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 C10orf126Q8N4M7 172 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 RNF182Q8N6D2 247 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 BRK1Q8WUW1 75 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 OR8B2Q96RD0 313 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 GGACTQ9BVM4 153 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 ZNF471Q9BX82 626 aaPredicted RBP2.6□□□□□ -1.99
SNX13-211ENST00000496855 CALML5Q9NZT1 146 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 N4BP2Q86UW6 1770 aaPredicted RBP2.6□□□□□ -1.99
SNX13-211ENST00000496855 CUL7Q14999 1698 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 SPATA31E1Q6ZUB1 1445 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 FER1L6Q2WGJ9 1857 aa2.6□□□□□ -1.99
SNX13-211ENST00000496855 IBTKQ9P2D0 1353 aaPredicted RBP2.6□□□□□ -1.99
SNX13-211ENST00000496855 VIRMAQ69YN4 1812 aaKnown RBP2.6□□□□□ -1.99
SNX13-211ENST00000496855 CACNA1DQ01668 2161 aa2.59□□□□□ -1.99
SNX13-211ENST00000496855 ARHGEF28Q8N1W1 1705 aaKnown RBP2.59□□□□□ -1.99
SNX13-211ENST00000496855 ATP6V1G2-DDX39BF2Z307 99 aa2.59□□□□□ -1.99
SNX13-211ENST00000496855 GNRH2O43555 120 aa2.59□□□□□ -1.99
SNX13-211ENST00000496855 CST7O76096 145 aa2.59□□□□□ -1.99
SNX13-211ENST00000496855 IGLC6P0CF74 106 aa2.59□□□□□ -1.99
SNX13-211ENST00000496855 CRYGAP11844 174 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms