RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 OR52L1Q8NGH7 329 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 OR5D16Q8NGK9 328 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 OR5AK2Q8NH90 309 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 BORCS7Q96B45 105 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 SLC35G5Q96KT7 338 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 C18orf15Q96N68 181 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 CIB3Q96Q77 187 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-212ENST00000496458 LINC01587Q99440 93 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 TIMM17AQ99595 171 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 ZNF471Q9BX82 626 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-212ENST00000496458 ATG5Q9H1Y0 275 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 HES4Q9HCC6 221 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 TMEM242Q9NWH2 141 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 FKBP11Q9NYL4 201 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 TAS2R8Q9NYW2 309 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 COQ4Q9Y3A0 265 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 UFC1Q9Y3C8 167 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 CEP295Q9C0D2 2601 aa3.02□□□□□ -1.93
SF3B1-212ENST00000496458 GOLGA4Q13439 2230 aaKnown RBP3.01□□□□□ -1.93
SF3B1-212ENST00000496458 SPAG17Q6Q759 2223 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 LRP4O75096 1905 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 GREB1Q4ZG55 1949 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 ANAPC1Q9H1A4 1944 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 OTOGLQ3ZCN5 2332 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 IGLV11-55A0A075B6I3 123 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 TRBV24-1A0A075B6N3 115 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 IGHV1-69-2A0A0G2JMI3 117 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 TMEM250H0YL14 139 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 GABARAPH6UMI1 98 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 K7EPK0 472 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 CCL16O15467 120 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 HCRTO43612 131 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 NDUFB6O95139 128 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 SOD1P00441 154 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 IGLV2-8P01709 118 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 IGHG2P01859 326 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 APOC2P02655 101 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 CSN2P05814 226 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 GRB2P62993 217 aaKnown RBP3.01□□□□□ -1.93
SF3B1-212ENST00000496458 ERCC8Q13216 396 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 ELOBQ15370 118 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 ABCA11PQ4W5N1 156 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 COMMD6Q7Z4G1 85 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 PRNTQ86SH4 94 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 TMEM86AQ8N2M4 240 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 DEFB125Q8N687 156 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 ZNF709Q8N972 641 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 OR11G2Q8NGC1 345 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 OR10G4Q8NGN3 311 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 OR52P1PQ8NH57 321 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 UBALD1Q8TB05 177 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 GPR119Q8TDV5 335 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 FRZBQ92765 325 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 TSLPQ969D9 159 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 PTX4Q96A99 478 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 FXYD5Q96DB9 178 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 MS4A6EQ96DS6 147 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 HSD17B10Q99714 261 aaKnown RBP3.01□□□□□ -1.93
SF3B1-212ENST00000496458 SPIN2AQ99865 258 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 SPIN2BQ9BPZ2 258 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 GINS3Q9BRX5 216 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 PSMG3Q9BT73 122 aaPredicted RBP3.01□□□□□ -1.93
SF3B1-212ENST00000496458 LINC00470Q9BZP3 86 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 OR52D1Q9H346 318 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 CA10Q9NS85 328 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 UQCR10Q9UDW1 63 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 LAMTOR2Q9Y2Q5 125 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 KNTC1P50748 2209 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 PI4KAP42356 2102 aa3.01□□□□□ -1.93
SF3B1-212ENST00000496458 TSC2P49815 1807 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 LAMA1P25391 3075 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 CFAP54Q96N23 3096 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 CHD8Q9HCK8 2581 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 TRBV6-7A0A0A0MS04 114 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 TRAV14DV4A0A0A6YYC5 116 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 A0A1W2PRS3 328 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 C5orf49A4QMS7 147 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 TMEM235A6NFC5 223 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 E7EQ34 232 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 CD5LO43866 347 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 GNG7O60262 68 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 COX7A2P2O60397 106 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 IGLV2-23P01705 113 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 TRGC2P03986 189 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 OPN1SWP03999 348 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 MPC1LP0DKB6 136 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 FAUP35544 74 aaKnown RBP3□□□□□ -1.93
SF3B1-212ENST00000496458 GABRA2P47869 451 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 HLA-DRB3P79483 266 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 AKR1C1Q04828 323 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 NUMA1Q14980 2115 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 LTC4SQ16873 150 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 IAH1Q2TAA2 248 aaPredicted RBP3□□□□□ -1.93
SF3B1-212ENST00000496458 LINC00303Q3SY05 128 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 UBE2NLQ5JXB2 153 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 FAM201AQ5SY85 155 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 FAM78BQ5VT40 261 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 CEMP1Q6PRD7 247 aaPredicted RBP3□□□□□ -1.93
SF3B1-212ENST00000496458 Q6ZRU5 148 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 SHISA6Q6ZSJ9 500 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms