RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 A0A1W2PRM7 423 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 NPIPB5A8MRT5 1133 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 SERF1AO75920 110 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 SCGB1D1O95968 90 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 CD24P25063 80 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 CDKN1AP38936 164 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 ZNF562Q6V9R5 426 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 BPIFA4PQ86YQ2 179 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 WIPF2Q8TF74 440 aaPredicted RBP8.77□□□□□ -1.01
CMSS1-208ENST00000496116 TSKUQ8WUA8 353 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 FAM168AQ92567 244 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 PRO1933Q9H354 126 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 NCBP2LA6PVI3 153 aaKnown RBP8.76□□□□□ -1.01
CMSS1-208ENST00000496116 LTAP01374 205 aa8.76□□□□□ -1.01
CMSS1-208ENST00000496116 PAX1P15863 534 aa8.76□□□□□ -1.01
CMSS1-208ENST00000496116 ZNF664Q8N3J9 261 aa8.76□□□□□ -1.01
CMSS1-208ENST00000496116 OR4F17Q8NGA8 305 aa8.76□□□□□ -1.01
CMSS1-208ENST00000496116 ARPC1AQ92747 370 aa8.76□□□□□ -1.01
CMSS1-208ENST00000496116 SAMD10Q9BYL1 202 aa8.76□□□□□ -1.01
CMSS1-208ENST00000496116 C7orf69Q9H7B7 122 aa8.76□□□□□ -1.01
CMSS1-208ENST00000496116 THYN1Q9P016 225 aa8.76□□□□□ -1.01
CMSS1-208ENST00000496116 GNG7O60262 68 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 APCSP02743 223 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 HOXB4P17483 251 aaPredicted RBP8.75□□□□□ -1.01
CMSS1-208ENST00000496116 BRS3P32247 399 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 NUP35Q8NFH5 326 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 RNF125Q96EQ8 232 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 C14orf144Q96I85 54 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 SGK494Q96LW2 274 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 SHANK2-AS3Q9BTD1 123 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 MLST8Q9BVC4 326 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 UBTD1Q9HAC8 227 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 ZNF586Q9NXT0 402 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 LRBAP50851 2863 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 ATRXP46100 2492 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 A6NNC1 897 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 HIGD1CA8MV81 97 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 H3BRN7 92 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 H3BTX0 84 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 IL4P05112 153 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 EFNA4P52798 201 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 LINC00310P59036 64 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 EBI3Q14213 229 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 CT83Q5H943 113 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 REC114Q7Z4M0 266 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 ATP5L2Q7Z4Y8 100 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 DAZAP1Q96EP5 407 aaKnown RBP8.75□□□□□ -1.01
CMSS1-208ENST00000496116 ZNF48Q96MX3 618 aaPredicted RBP8.75□□□□□ -1.01
CMSS1-208ENST00000496116 PRORYQ9H606 182 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 GNB4Q9HAV0 340 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 NAGKQ9UJ70 344 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 COL6A6A6NMZ7 2263 aa8.75□□□□□ -1.01
CMSS1-208ENST00000496116 IGLV11-55A0A075B6I3 123 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 A0A1W2PPR1 153 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 ZNF253O75346 499 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 SCGB2A1O75556 95 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 P01737 135 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 TMEM11P17152 192 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 ZFP36P26651 326 aaKnown RBP8.74□□□□□ -1.01
CMSS1-208ENST00000496116 SRIP30626 198 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 MFAP4P55083 255 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 KIAA1644Q3SXP7 199 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 TTC9CQ8N5M4 171 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 ZNF491Q8N8L2 437 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 NEU1Q99519 415 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 RPP21Q9H633 154 aaKnown RBP8.74□□□□□ -1.01
CMSS1-208ENST00000496116 ZNF492Q9P255 531 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 TBL2Q9Y4P3 447 aaKnown RBP8.74□□□□□ -1.01
CMSS1-208ENST00000496116 A8MWL6 223 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 A8MWP6 167 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 BMPR1BO00238 502 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 LYPD1Q8N2G4 141 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 Q8N6K4 173 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 SIGLECL1Q8N7X8 197 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 SIRPDQ9H106 197 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 C1RLQ9NZP8 487 aa8.74□□□□□ -1.01
CMSS1-208ENST00000496116 ABCA1O95477 2261 aa8.73□□□□□ -1.01
CMSS1-208ENST00000496116 TRBV19A0A075B6N1 114 aa8.73□□□□□ -1.01
CMSS1-208ENST00000496116 IGHV2-70DA0A0C4DH43 119 aa8.73□□□□□ -1.01
CMSS1-208ENST00000496116 K7EQM0 130 aa8.73□□□□□ -1.01
CMSS1-208ENST00000496116 NDUFS7O75251 213 aa8.73□□□□□ -1.01
CMSS1-208ENST00000496116 TOX4O94842 621 aa8.73□□□□□ -1.01
CMSS1-208ENST00000496116 FAM106CPP0CH98 169 aa8.73□□□□□ -1.01
CMSS1-208ENST00000496116 KLF17Q5JT82 389 aaPredicted RBP8.73□□□□□ -1.01
CMSS1-208ENST00000496116 ASPHD1Q5U4P2 390 aa8.73□□□□□ -1.01
CMSS1-208ENST00000496116 DYNAPQ8N1N2 210 aa8.73□□□□□ -1.01
CMSS1-208ENST00000496116 IGFBPL1Q8WX77 278 aa8.73□□□□□ -1.01
CMSS1-208ENST00000496116 KCNS1Q96KK3 526 aa8.73□□□□□ -1.01
CMSS1-208ENST00000496116 FANCD2OSQ96PS1 177 aa8.73□□□□□ -1.01
CMSS1-208ENST00000496116 HSPB9Q9BQS6 159 aa8.73□□□□□ -1.01
CMSS1-208ENST00000496116 PRSS22Q9GZN4 317 aa8.73□□□□□ -1.01
CMSS1-208ENST00000496116 ZZEF1O43149 2961 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 WI2-2373I1.2A0A1W2PRP0 233 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 C19orf71A6NCJ1 209 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 ZNF705FA8MVS1 300 aaPredicted RBP8.72□□□□□ -1.01
CMSS1-208ENST00000496116 F2Z2F3 143 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 ZNF705DP0CH99 300 aaPredicted RBP8.72□□□□□ -1.01
CMSS1-208ENST00000496116 ZNF705BP0CI00 300 aaPredicted RBP8.72□□□□□ -1.01
CMSS1-208ENST00000496116 UBE2E1P51965 193 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 FBLN7Q53RD9 439 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms