RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 PPP1R14BQ96C90 147 aa17.61■□□□□ 0.41
HLA-C-209ENST00000495835 CLUHP3Q96NS8 147 aa17.61■□□□□ 0.41
HLA-C-209ENST00000495835 PSENENQ9NZ42 101 aa17.61■□□□□ 0.41
HLA-C-209ENST00000495835 HLA-DRB4X5D2U9 266 aa17.61■□□□□ 0.41
HLA-C-209ENST00000495835 ANXA7P20073 488 aaKnown RBP17.6■□□□□ 0.41
HLA-C-209ENST00000495835 MEOX2P50222 304 aa17.6■□□□□ 0.41
HLA-C-209ENST00000495835 SPATA31B1PQ5VZV4 182 aa17.6■□□□□ 0.41
HLA-C-209ENST00000495835 LINC00299Q6ZSB3 139 aa17.6■□□□□ 0.41
HLA-C-209ENST00000495835 FNDC10F2Z333 226 aa17.59■□□□□ 0.41
HLA-C-209ENST00000495835 H3BP45 60 aa17.59■□□□□ 0.41
HLA-C-209ENST00000495835 ISLRO14498 428 aa17.59■□□□□ 0.41
HLA-C-209ENST00000495835 TAS2R30P59541 319 aa17.59■□□□□ 0.41
HLA-C-209ENST00000495835 AKR1C1Q04828 323 aa17.59■□□□□ 0.41
HLA-C-209ENST00000495835 GPR82Q96P67 336 aa17.59■□□□□ 0.41
HLA-C-209ENST00000495835 TBC1D24Q9ULP9 559 aa17.59■□□□□ 0.41
HLA-C-209ENST00000495835 SOCS3O14543 225 aa17.58■□□□□ 0.4
HLA-C-209ENST00000495835 PLA2G10O15496 165 aa17.58■□□□□ 0.4
HLA-C-209ENST00000495835 LYRM1O43325 122 aa17.58■□□□□ 0.4
HLA-C-209ENST00000495835 TCTAP57738 103 aa17.58■□□□□ 0.4
HLA-C-209ENST00000495835 NANOS2P60321 138 aaKnown RBP17.58■□□□□ 0.4
HLA-C-209ENST00000495835 FOXI2Q6ZQN5 318 aa17.58■□□□□ 0.4
HLA-C-209ENST00000495835 ACOT7LQ6ZUV0 252 aa17.58■□□□□ 0.4
HLA-C-209ENST00000495835 WDR12Q9GZL7 423 aaKnown RBP17.58■□□□□ 0.4
HLA-C-209ENST00000495835 X6R8D5 127 aa17.58■□□□□ 0.4
HLA-C-209ENST00000495835 PMS2P5A8MQ11 134 aa17.57■□□□□ 0.4
HLA-C-209ENST00000495835 C11orf94C9JXX5 98 aa17.57■□□□□ 0.4
HLA-C-209ENST00000495835 GALR1P47211 349 aa17.57■□□□□ 0.4
HLA-C-209ENST00000495835 IAH1Q2TAA2 248 aaPredicted RBP17.57■□□□□ 0.4
HLA-C-209ENST00000495835 SAV1Q9H4B6 383 aaPredicted RBP17.57■□□□□ 0.4
HLA-C-209ENST00000495835 IGHV4-28A0A0C4DH34 117 aa17.56■□□□□ 0.4
HLA-C-209ENST00000495835 ZNF98A6NK75 572 aa17.56■□□□□ 0.4
HLA-C-209ENST00000495835 SSSCA1O60232 199 aa17.56■□□□□ 0.4
HLA-C-209ENST00000495835 TSC22D2O75157 780 aa17.56■□□□□ 0.4
HLA-C-209ENST00000495835 LY6G6CO95867 125 aa17.56■□□□□ 0.4
HLA-C-209ENST00000495835 PAX9P55771 341 aa17.56■□□□□ 0.4
HLA-C-209ENST00000495835 SELENOTP62341 195 aa17.56■□□□□ 0.4
HLA-C-209ENST00000495835 TMEM14EPQ6UXP3 125 aa17.56■□□□□ 0.4
HLA-C-209ENST00000495835 ZBTB8BQ8NAP8 495 aaPredicted RBP17.56■□□□□ 0.4
HLA-C-209ENST00000495835 CCDC32Q9BV29 185 aa17.56■□□□□ 0.4
HLA-C-209ENST00000495835 C20orf85Q9H1P6 137 aa17.56■□□□□ 0.4
HLA-C-209ENST00000495835 NPVFQ9HCQ7 196 aa17.56■□□□□ 0.4
HLA-C-209ENST00000495835 EPPK1P58107 5090 aaKnown RBP17.55■□□□□ 0.4
HLA-C-209ENST00000495835 DEFB4AO15263 64 aa17.55■□□□□ 0.4
HLA-C-209ENST00000495835 RBMY1A1P0DJD3 496 aaKnown RBP17.55■□□□□ 0.4
HLA-C-209ENST00000495835 RBMY1CP0DJD4 496 aa17.55■□□□□ 0.4
HLA-C-209ENST00000495835 DLK1P80370 383 aa17.55■□□□□ 0.4
HLA-C-209ENST00000495835 RBMY1FQ15415 496 aaKnown RBP17.55■□□□□ 0.4
HLA-C-209ENST00000495835 S100A7AQ86SG5 101 aa17.55■□□□□ 0.4
HLA-C-209ENST00000495835 OR1B1Q8NGR6 318 aa17.55■□□□□ 0.4
HLA-C-209ENST00000495835 LINC00052Q96N35 136 aa17.55■□□□□ 0.4
HLA-C-209ENST00000495835 TMEM147Q9BVK8 224 aa17.55■□□□□ 0.4
HLA-C-209ENST00000495835 CLEC5AQ9NY25 188 aa17.55■□□□□ 0.4
HLA-C-209ENST00000495835 TCRBP04435 133 aa17.54■□□□□ 0.4
HLA-C-209ENST00000495835 ORM2P19652 201 aa17.54■□□□□ 0.4
HLA-C-209ENST00000495835 PLP1P60201 277 aa17.54■□□□□ 0.4
HLA-C-209ENST00000495835 CYP2G1PQ6ZSU1 146 aa17.54■□□□□ 0.4
HLA-C-209ENST00000495835 OR10P1Q8NGE3 313 aa17.54■□□□□ 0.4
HLA-C-209ENST00000495835 C2CD4CQ8TF44 421 aa17.54■□□□□ 0.4
HLA-C-209ENST00000495835 IL5P05113 134 aa17.53■□□□□ 0.4
HLA-C-209ENST00000495835 LGALS9CQ6DKI2 356 aa17.53■□□□□ 0.4
HLA-C-209ENST00000495835 TMEM182Q6ZP80 229 aaPredicted RBP17.53■□□□□ 0.4
HLA-C-209ENST00000495835 NEU1Q99519 415 aa17.53■□□□□ 0.4
HLA-C-209ENST00000495835 RPRMQ9NS64 109 aa17.53■□□□□ 0.4
HLA-C-209ENST00000495835 XCL2Q9UBD3 114 aa17.53■□□□□ 0.4
HLA-C-209ENST00000495835 RNF24Q9Y225 148 aa17.53■□□□□ 0.4
HLA-C-209ENST00000495835 SMCO3A2RU48 225 aa17.52■□□□□ 0.4
HLA-C-209ENST00000495835 K7EPK0 472 aa17.52■□□□□ 0.4
HLA-C-209ENST00000495835 GATA2P23769 480 aaPredicted RBP17.52■□□□□ 0.4
HLA-C-209ENST00000495835 C16orf92Q96LL3 132 aa17.52■□□□□ 0.4
HLA-C-209ENST00000495835 GGACTQ9BVM4 153 aa17.52■□□□□ 0.4
HLA-C-209ENST00000495835 SLC25A32Q9H2D1 315 aa17.52■□□□□ 0.4
HLA-C-209ENST00000495835 SLC25A22Q9H936 323 aa17.52■□□□□ 0.4
HLA-C-209ENST00000495835 GSKIPQ9P0R6 139 aa17.52■□□□□ 0.4
HLA-C-209ENST00000495835 SMIM9A6NGZ8 99 aa17.51■□□□□ 0.39
HLA-C-209ENST00000495835 SCGB1D2O95969 90 aa17.51■□□□□ 0.39
HLA-C-209ENST00000495835 RAP2BP61225 183 aa17.51■□□□□ 0.39
HLA-C-209ENST00000495835 ZNF846Q147U1 533 aa17.51■□□□□ 0.39
HLA-C-209ENST00000495835 GDF5OSQ5U4N7 250 aa17.51■□□□□ 0.39
HLA-C-209ENST00000495835 EBLN2Q6P2I7 272 aa17.51■□□□□ 0.39
HLA-C-209ENST00000495835 RSG1Q9BU20 258 aa17.51■□□□□ 0.39
HLA-C-209ENST00000495835 MGAT4CQ9UBM8 478 aa17.51■□□□□ 0.39
HLA-C-209ENST00000495835 METTL15P1P0C7V9 234 aa17.5■□□□□ 0.39
HLA-C-209ENST00000495835 TEPPQ6URK8 271 aa17.5■□□□□ 0.39
HLA-C-209ENST00000495835 ZNF705AQ6ZN79 300 aaPredicted RBP17.5■□□□□ 0.39
HLA-C-209ENST00000495835 SLC25A39Q9BZJ4 359 aaPredicted RBP17.5■□□□□ 0.39
HLA-C-209ENST00000495835 RCL1Q9Y2P8 373 aaKnown RBP17.5■□□□□ 0.39
HLA-C-209ENST00000495835 ELOA3CA0A087WX78 387 aaPredicted RBP17.49■□□□□ 0.39
HLA-C-209ENST00000495835 H3BRN7 92 aa17.49■□□□□ 0.39
HLA-C-209ENST00000495835 HYPMO75409 117 aa17.49■□□□□ 0.39
HLA-C-209ENST00000495835 MBPP02686 304 aaPredicted RBP17.49■□□□□ 0.39
HLA-C-209ENST00000495835 PXDC1Q5TGL8 231 aa17.49■□□□□ 0.39
HLA-C-209ENST00000495835 ZNF431Q8TF32 576 aaPredicted RBP17.49■□□□□ 0.39
HLA-C-209ENST00000495835 S100ZQ8WXG8 99 aa17.49■□□□□ 0.39
HLA-C-209ENST00000495835 SHANK2-AS3Q9BTD1 123 aa17.49■□□□□ 0.39
HLA-C-209ENST00000495835 HIGD1AQ9Y241 93 aa17.49■□□□□ 0.39
HLA-C-209ENST00000495835 A0A0J9YX75 114 aa17.48■□□□□ 0.39
HLA-C-209ENST00000495835 C7orf66A4D0T2 115 aa17.48■□□□□ 0.39
HLA-C-209ENST00000495835 ZNF705FA8MVS1 300 aaPredicted RBP17.48■□□□□ 0.39
HLA-C-209ENST00000495835 ZNF705DP0CH99 300 aaPredicted RBP17.48■□□□□ 0.39
HLA-C-209ENST00000495835 ZNF705BP0CI00 300 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms