RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 ZNF414Q96IQ9 312 aa9.52□□□□□ -0.88
COL25A1-204ENST00000494183 CYTL1Q9NRR1 136 aa9.52□□□□□ -0.88
COL25A1-204ENST00000494183 CEP295Q9C0D2 2601 aa9.52□□□□□ -0.88
COL25A1-204ENST00000494183 PPP1R17O96001 155 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 PAX1P15863 534 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 LGALS3P17931 250 aaKnown RBP9.52□□□□□ -0.89
COL25A1-204ENST00000494183 LMO1P25800 156 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 HIST1H4GQ99525 98 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 SORL1Q92673 2214 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 A0A087WWC5 75 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 TRAV8-6A0A0B4J262 113 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 MEIG1Q5JSS6 88 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 TCF23Q7RTU1 214 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 SLC25A39Q9BZJ4 359 aaPredicted RBP9.52□□□□□ -0.89
COL25A1-204ENST00000494183 KIAA1671Q9BY89 1806 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 IZUMO1RA6ND01 250 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 NDPQ00604 133 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 C3orf36Q3SXR2 165 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 FAM209BQ5JX69 171 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 CYB5R2Q6BCY4 276 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 DUX4L9Q6RFH8 374 aaPredicted RBP9.52□□□□□ -0.89
COL25A1-204ENST00000494183 SIGLEC15Q6ZMC9 328 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 TMEM183AQ8IXX5 376 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 MGST2Q99735 147 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 UQCR10Q9UDW1 63 aa9.52□□□□□ -0.89
COL25A1-204ENST00000494183 TRAV21A0A0B4J279 112 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 A6NNC1 897 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 CIDEAO60543 219 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 DUSP14O95147 198 aaKnown RBP9.51□□□□□ -0.89
COL25A1-204ENST00000494183 ZNF688P0C7X2 276 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 WDR86Q86TI4 376 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 CHD8Q9HCK8 2581 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 TMEM238LA0A1B0GVL6 79 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 A6NJY4 79 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 OR11H12B2RN74 326 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 COL5A1-AS1Q5SY13 56 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 OR11H1Q8NG94 326 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 OR11H2Q8NH07 326 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 AGMATQ9BSE5 352 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 SOX21Q9Y651 276 aaPredicted RBP9.51□□□□□ -0.89
COL25A1-204ENST00000494183 MSMBP08118 114 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 GATA4P43694 442 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 OSTCQ9NRP0 149 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 TBL2Q9Y4P3 447 aaKnown RBP9.51□□□□□ -0.89
COL25A1-204ENST00000494183 C15orf62A8K5M9 175 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 TMEM50AO95807 157 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 C12orf54Q6X4T0 127 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 PIP4P2Q8N4L2 257 aa9.51□□□□□ -0.89
COL25A1-204ENST00000494183 CIRBPQ14011 172 aaKnown RBP9.5□□□□□ -0.89
COL25A1-204ENST00000494183 LINC01356Q8N9X3 169 aa9.5□□□□□ -0.89
COL25A1-204ENST00000494183 DPH3Q96FX2 82 aa9.5□□□□□ -0.89
COL25A1-204ENST00000494183 SCGB3A1Q96QR1 104 aa9.5□□□□□ -0.89
COL25A1-204ENST00000494183 TEX38Q6PEX7 206 aa9.5□□□□□ -0.89
COL25A1-204ENST00000494183 SPSB3Q6PJ21 355 aa9.5□□□□□ -0.89
COL25A1-204ENST00000494183 CENPFP49454 3210 aa9.5□□□□□ -0.89
COL25A1-204ENST00000494183 SAP30O75446 220 aa9.5□□□□□ -0.89
COL25A1-204ENST00000494183 IGLV1-44P01699 117 aa9.5□□□□□ -0.89
COL25A1-204ENST00000494183 TRGV9Q99603 122 aa9.5□□□□□ -0.89
COL25A1-204ENST00000494183 RPLP1P05386 114 aaKnown RBP9.49□□□□□ -0.89
COL25A1-204ENST00000494183 COX6CP09669 75 aa9.49□□□□□ -0.89
COL25A1-204ENST00000494183 LBHQ53QV2 105 aaPredicted RBP9.49□□□□□ -0.89
COL25A1-204ENST00000494183 C2CD3Q4AC94 2353 aa9.49□□□□□ -0.89
COL25A1-204ENST00000494183 IGKV2-40A0A087WW87 121 aaPredicted RBP9.49□□□□□ -0.89
COL25A1-204ENST00000494183 NDUFS8O00217 210 aa9.49□□□□□ -0.89
COL25A1-204ENST00000494183 IGKV2D-40P01614 121 aaPredicted RBP9.49□□□□□ -0.89
COL25A1-204ENST00000494183 RNASE2P10153 161 aaKnown RBP9.49□□□□□ -0.89
COL25A1-204ENST00000494183 RUSC1-AS1Q66K80 236 aa9.49□□□□□ -0.89
COL25A1-204ENST00000494183 A0A1B0GW15 77 aa9.49□□□□□ -0.89
COL25A1-204ENST00000494183 PLXNA2O75051 1894 aa9.48□□□□□ -0.89
COL25A1-204ENST00000494183 IGLV3-9A0A075B6K5 115 aa9.48□□□□□ -0.89
COL25A1-204ENST00000494183 A0A1W2PPI3 338 aa9.48□□□□□ -0.89
COL25A1-204ENST00000494183 ATP5LO75964 103 aa9.48□□□□□ -0.89
COL25A1-204ENST00000494183 LOXP28300 417 aaPredicted RBP9.48□□□□□ -0.89
COL25A1-204ENST00000494183 ERVK11-1P61568 191 aa9.48□□□□□ -0.89
COL25A1-204ENST00000494183 Q5PR19 223 aa9.48□□□□□ -0.89
COL25A1-204ENST00000494183 ZNF562Q6V9R5 426 aa9.48□□□□□ -0.89
COL25A1-204ENST00000494183 LCNL1Q6ZST4 164 aa9.48□□□□□ -0.89
COL25A1-204ENST00000494183 TMEM101Q96IK0 257 aa9.48□□□□□ -0.89
COL25A1-204ENST00000494183 DERL1Q9BUN8 251 aa9.48□□□□□ -0.89
COL25A1-204ENST00000494183 DENND4CQ5VZ89 1909 aa9.48□□□□□ -0.89
COL25A1-204ENST00000494183 GOLGB1Q14789 3259 aaKnown RBP9.48□□□□□ -0.89
COL25A1-204ENST00000494183 OVOL1O14753 267 aa9.48□□□□□ -0.89
COL25A1-204ENST00000494183 DNLZQ5SXM8 178 aa9.48□□□□□ -0.89
COL25A1-204ENST00000494183 NAV3Q8IVL0 2385 aa9.48□□□□□ -0.89
COL25A1-204ENST00000494183 TRAV9-1A0A075B6T8 112 aa9.47□□□□□ -0.89
COL25A1-204ENST00000494183 DDTP30046 118 aa9.47□□□□□ -0.89
COL25A1-204ENST00000494183 UBE2E1P51965 193 aa9.47□□□□□ -0.89
COL25A1-204ENST00000494183 C1QL4Q86Z23 238 aa9.47□□□□□ -0.89
COL25A1-204ENST00000494183 OR5AN1Q8NGI8 311 aa9.47□□□□□ -0.89
COL25A1-204ENST00000494183 Q8TCH9 128 aa9.47□□□□□ -0.89
COL25A1-204ENST00000494183 ZFYVE26Q68DK2 2539 aa9.47□□□□□ -0.89
COL25A1-204ENST00000494183 LOC102724200A0A096LPH7 203 aaPredicted RBP9.47□□□□□ -0.89
COL25A1-204ENST00000494183 TRAV8-1A0A0A6YYK1 113 aa9.47□□□□□ -0.89
COL25A1-204ENST00000494183 ITGB1BP1O14713 200 aa9.47□□□□□ -0.89
COL25A1-204ENST00000494183 CD5P06127 495 aa9.47□□□□□ -0.89
COL25A1-204ENST00000494183 GZMBP10144 247 aa9.47□□□□□ -0.89
COL25A1-204ENST00000494183 CFPP27918 469 aa9.47□□□□□ -0.89
COL25A1-204ENST00000494183 GRNP28799 593 aaKnown RBP9.47□□□□□ -0.89
COL25A1-204ENST00000494183 IGFL4Q6B9Z1 124 aa9.47□□□□□ -0.89
COL25A1-204ENST00000494183 FOXC2Q99958 501 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms