RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 SLC16A13Q7RTY0 426 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 UXS1Q8NBZ7 420 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 PINX1Q96BK5 328 aaKnown RBP5.05□□□□□ -1.6
VPS52-219ENST00000493379 TRGV9Q99603 122 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 FAM110AQ9BQ89 295 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 RNF126Q9BV68 326 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 KRTAP3-1Q9BYR8 98 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 MAGT1Q9H0U3 335 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 PSENENQ9NZ42 101 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 GSKIPQ9P0R6 139 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 MGAT4CQ9UBM8 478 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 ZNF256Q9Y2P7 627 aaPredicted RBP5.05□□□□□ -1.6
VPS52-219ENST00000493379 TRAV14DV4A0A0A6YYC5 116 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 IGHV7-4-1A0A0J9YVY3 117 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 ZNF320A2RRD8 509 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 C5orf51A6NDU8 294 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 H0YIZ8 118 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 CCSO14618 274 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 CHEK1O14757 476 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 TSPAN4O14817 238 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 SCGB2A1O75556 95 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 CFDP00746 253 aaPredicted RBP5.04□□□□□ -1.6
VPS52-219ENST00000493379 IGHV3-48P01763 117 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 IFNA4P05014 189 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 IAPPP10997 89 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 LYL1P12980 280 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 GP9P14770 177 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 OR10J1P30954 320 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 RND2P52198 227 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 ARL16Q0P5N6 197 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 RGS21Q2M5E4 152 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 SPANXN5Q5MJ07 72 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 LCN12Q6JVE5 192 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 LINC00322Q6ZN03 302 aaPredicted RBP5.04□□□□□ -1.6
VPS52-219ENST00000493379 HAPLN4Q86UW8 402 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 TMEM252Q8N6L7 170 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 OR10P1Q8NGE3 313 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 Q8WTZ3 238 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 GLMPQ8WWB7 406 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 ASB13Q8WXK3 278 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 LYRM2Q9NU23 88 aaPredicted RBP5.04□□□□□ -1.6
VPS52-219ENST00000493379 MLXQ9UH92 298 aa5.04□□□□□ -1.6
VPS52-219ENST00000493379 PUS1Q9Y606 427 aaKnown RBP eCLIP5.04□□□□□ -1.6
VPS52-219ENST00000493379 TRAV2A0A0B4J234 112 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 IGHV3-35A0A0C4DH35 117 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 IZUMO1RA6ND01 250 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 SSSCA1O60232 199 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 RD3LP0DJH9 198 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 PSG1P11464 419 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 EDN2P20800 178 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 NPPCP23582 126 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 S100A11P31949 105 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 TIGITQ495A1 244 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 OR8G2PQ6IF36 304 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 TMEM61Q8N0U2 210 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 UBAC2Q8NBM4 344 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 GINS3Q9BRX5 216 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 MLST8Q9BVC4 326 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 NPVFQ9HCQ7 196 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 ALG5Q9Y673 324 aa5.03□□□□□ -1.6
VPS52-219ENST00000493379 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 A0A1W2PS18 150 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 PRSS47A8MTI9 375 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 E5RGE8 158 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 BUB3O43684 328 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 SIX6O95475 246 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 MPC2O95563 127 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 RLN2P04090 185 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 FABP1P07148 127 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 CXCL3P19876 107 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 PVALBP20472 110 aaPredicted RBP5.02□□□□□ -1.61
VPS52-219ENST00000493379 P2RY1P47900 373 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 SULT1A1P50225 295 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 SELENOTP62341 195 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 BLOC1S1P78537 153 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 ATP6V1FQ16864 119 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 C1orf194Q5T5A4 169 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 C16orf54Q6UWD8 224 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 OR51G1Q8NGK1 321 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 PPP1R1CQ8WVI7 109 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 SLC35E1Q96K37 410 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 SPAG8Q99932 426 aaPredicted RBP5.02□□□□□ -1.61
VPS52-219ENST00000493379 RHPN1-AS1Q9BWJ2 59 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 KRTAP4-6Q9BYQ5 205 aa5.02□□□□□ -1.61
VPS52-219ENST00000493379 FAM24AA6NFZ4 105 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 FAM25EA8MYX2 175 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 H3BP45 60 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 GOSR2O14653 212 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 CCNKO75909 580 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 APOHP02749 345 aaPredicted RBP5.01□□□□□ -1.61
VPS52-219ENST00000493379 HNRNPCP07910 306 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS52-219ENST00000493379 METTL15P1P0C7V9 234 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 BMI1P35226 326 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 PCP4P48539 62 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 CMC4P56277 68 aaPredicted RBP5.01□□□□□ -1.61
VPS52-219ENST00000493379 RRAS2P62070 204 aaPredicted RBP5.01□□□□□ -1.61
VPS52-219ENST00000493379 ZNF90Q03938 601 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 BAXQ07812 192 aa5.01□□□□□ -1.61
VPS52-219ENST00000493379 USF2Q15853 346 aaPredicted RBP5.01□□□□□ -1.61
VPS52-219ENST00000493379 PXDC1Q5TGL8 231 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms