RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 MS4A10Q96PG2 267 aa10.99□□□□□ -0.65
PDZRN3-210ENST00000492909 C21orf62Q9NYP8 219 aa10.99□□□□□ -0.65
PDZRN3-210ENST00000492909 PXMP4Q9Y6I8 212 aa10.99□□□□□ -0.65
PDZRN3-210ENST00000492909 IGKV1D-37A0A075B6S9 117 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 TCRBV4S1A1TA0A5B7 111 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 MFAP4P55083 255 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 CFHR3Q02985 330 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 TMEM241Q24JQ0 296 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 STPG3Q8N7X2 389 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 TRGV9Q99603 122 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 SMIM7Q9BQ49 75 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 DOK5Q9P104 306 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 SLC45A2Q9UMX9 530 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 S4R3C0 116 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 TRBV24-1A0A075B6N3 115 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 FAM223BA6NKX1 122 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 IGLV1-40P01703 118 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 TRGV3P03979 118 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 RNASE1P07998 156 aaKnown RBP10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 RPL15P61313 204 aaKnown RBP10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 SELENOTP62341 195 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 PRR20EP86478 221 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 PRR20CP86479 221 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 PRR20DP86480 221 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 PRR20BP86481 221 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 PRR20AP86496 221 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 ACOT6Q3I5F7 207 aaPredicted RBP10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 FAM223AQ8IWN6 122 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 RAB24Q969Q5 203 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 JMJD8Q96S16 334 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 NIT2Q9NQR4 276 aa10.98□□□□□ -0.65
PDZRN3-210ENST00000492909 HMGB3O15347 200 aaKnown RBP10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 GNG7O60262 68 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 HIST1H2BKO60814 126 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 YIF1AO95070 293 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 TRGC2P03986 189 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 HIST1H2BJP06899 126 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 FABP1P07148 127 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 IGLC1P0CG04 106 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 HIST1H2BOP23527 126 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 HIST1H2BBP33778 126 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 HIST1H2BDP58876 126 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 HIST1H2BCP62807 126 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 SRSF2Q01130 221 aaKnown RBP10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 ZNF90Q03938 601 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 HIST2H2BEQ16778 126 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 HIST1H2BHQ93079 126 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 TXN2Q99757 166 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 HIST1H2BNQ99877 126 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 HIST1H2BMQ99879 126 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 OR51M1Q9H341 326 aa10.97□□□□□ -0.65
PDZRN3-210ENST00000492909 TRAV30A0A087WSZ9 112 aa10.96□□□□□ -0.65
PDZRN3-210ENST00000492909 SEC14L6B5MCN3 397 aa10.96□□□□□ -0.65
PDZRN3-210ENST00000492909 PF4V1P10720 104 aa10.96□□□□□ -0.65
PDZRN3-210ENST00000492909 FCGR2BP31994 310 aaPredicted RBP10.96□□□□□ -0.65
PDZRN3-210ENST00000492909 TPPP2P59282 170 aa10.96□□□□□ -0.65
PDZRN3-210ENST00000492909 RPL23P62829 140 aaKnown RBP10.96□□□□□ -0.65
PDZRN3-210ENST00000492909 SLC35B1P78383 322 aa10.96□□□□□ -0.65
PDZRN3-210ENST00000492909 ATP5G2Q06055 141 aa10.96□□□□□ -0.65
PDZRN3-210ENST00000492909 Q56UQ5 140 aa10.96□□□□□ -0.65
PDZRN3-210ENST00000492909 ZNF329Q86UD4 541 aa10.96□□□□□ -0.65
PDZRN3-210ENST00000492909 GSN-AS1Q9NRJ2 163 aa10.96□□□□□ -0.65
PDZRN3-210ENST00000492909 ELOA3CA0A087WX78 387 aaPredicted RBP10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 TRBV7-1A0A0A6YYK4 115 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 IFITM10A6NMD0 228 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 F8W735 103 aaPredicted RBP10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 SCGB2A1O75556 95 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 IGHV3-23P01764 117 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 IGHG4P01861 327 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 LINC00869P0C866 280 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 GATA2P23769 480 aaPredicted RBP10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 CDC34P49427 236 aaPredicted RBP10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 ADIRFQ15847 76 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 PRIMA1Q86XR5 153 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 OR4F5Q8NH21 305 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 ZNF502Q8TBZ5 544 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 GATAD1Q8WUU5 269 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 EEF1AKMT3Q96AZ1 226 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 RPUSD4Q96CM3 377 aaKnown RBP10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 USMG5Q96IX5 58 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 OR4F4Q96R69 305 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 PARLQ9H300 379 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 GAR1Q9NY12 217 aaKnown RBP10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 TMEM89A2RUT3 159 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 PSMB11A5LHX3 300 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 PHOX2AO14813 284 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 IGKV1-17P01599 117 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 TRGC1P0CF51 173 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 Q6ZSV7 163 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 PYGO2Q9BRQ0 406 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 SERTAD4Q9NUC0 356 aa10.95□□□□□ -0.66
PDZRN3-210ENST00000492909 JMJD1CQ15652 2540 aa10.94□□□□□ -0.66
PDZRN3-210ENST00000492909 OR2T8A6NH00 312 aa10.94□□□□□ -0.66
PDZRN3-210ENST00000492909 PAGE4O60829 102 aa10.94□□□□□ -0.66
PDZRN3-210ENST00000492909 PFN1P07737 140 aaKnown RBP10.94□□□□□ -0.66
PDZRN3-210ENST00000492909 S100PP25815 95 aa10.94□□□□□ -0.66
PDZRN3-210ENST00000492909 PSMB8P28062 276 aa10.94□□□□□ -0.66
PDZRN3-210ENST00000492909 S100A2P29034 98 aa10.94□□□□□ -0.66
PDZRN3-210ENST00000492909 RAB9AP51151 201 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms