RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 IGKV1-33P01594 117 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 PSG5Q15238 335 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 TMEM183BQ1AE95 376 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 KIR3DL3Q8N743 410 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 TBX15Q96SF7 602 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 P2RX4Q99571 388 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 RPRMQ9NS64 109 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 HSPB8Q9UJY1 196 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 SLC45A2Q9UMX9 530 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 APCP25054 2843 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 HMGB3O15347 200 aaKnown RBP8.07□□□□□ -1.12
HDAC9-225ENST00000490851 FOXH1O75593 365 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 DEFA4P12838 97 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 KRTAP10-9P60411 292 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 CCL20P78556 96 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 MMDQ15546 238 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 TEX43Q6ZNM6 134 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 C19orf35Q6ZS72 473 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 ZNF709Q8N972 641 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 NPCDR1Q9BY65 106 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 NDUFA4L2Q9NRX3 87 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 A0A1B0GW64 132 aa8.06□□□□□ -1.12
HDAC9-225ENST00000490851 CGB1A6NKQ9 187 aa8.06□□□□□ -1.12
HDAC9-225ENST00000490851 CLDN34H7C241 214 aa8.06□□□□□ -1.12
HDAC9-225ENST00000490851 LCN15Q6UWW0 184 aa8.06□□□□□ -1.12
HDAC9-225ENST00000490851 C5orf17Q8NAS9 161 aa8.06□□□□□ -1.12
HDAC9-225ENST00000490851 OR9G4Q8NGQ1 327 aa8.06□□□□□ -1.12
HDAC9-225ENST00000490851 OR4A5Q8NH83 315 aa8.06□□□□□ -1.12
HDAC9-225ENST00000490851 EIF5A2Q9GZV4 153 aaKnown RBP8.06□□□□□ -1.12
HDAC9-225ENST00000490851 GTSF1LQ9H1H1 148 aa8.06□□□□□ -1.12
HDAC9-225ENST00000490851 SIGLEC9Q9Y336 463 aa8.06□□□□□ -1.12
HDAC9-225ENST00000490851 NBPF19A0A087WUL8 3843 aa8.06□□□□□ -1.12
HDAC9-225ENST00000490851 GCN1Q92616 2671 aaKnown RBP8.06□□□□□ -1.12
HDAC9-225ENST00000490851 CCDC168Q8NDH2 2452 aa8.06□□□□□ -1.12
HDAC9-225ENST00000490851 A0A087WWC5 75 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 PRSS46E5RG02 174 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 FCN1O00602 326 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 IGHV3-48P01763 117 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 WT1-ASQ06250 92 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 FOXE3Q13461 319 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 MLANAQ16655 118 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 MRGPRG-AS1Q2M3A8 158 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 FFAR4Q5NUL3 377 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 C20orf24Q9BUV8 137 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 A0A1B0GUS0 222 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 IFNA1P01562 189 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 RNASE2P10153 161 aaKnown RBP8.05□□□□□ -1.12
HDAC9-225ENST00000490851 ERHP84090 104 aaKnown RBP8.05□□□□□ -1.12
HDAC9-225ENST00000490851 TDRG1Q3Y452 100 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 HIST2H2BCQ6DN03 193 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 TREML4Q6UXN2 200 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 NEGR1Q7Z3B1 354 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 PPP1R27Q86WC6 154 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 ABHD5Q8WTS1 349 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 SSMEM1Q8WWF3 244 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 SLC25A22Q9H936 323 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 ZNF586Q9NXT0 402 aa8.05□□□□□ -1.12
HDAC9-225ENST00000490851 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.05□□□□□ -1.12
HDAC9-225ENST00000490851 C9JQL5 133 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 SAA4P35542 130 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 RPL27AP46776 148 aaKnown RBP8.04□□□□□ -1.12
HDAC9-225ENST00000490851 ZNF726P1Q15940 193 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 VWC2Q2TAL6 325 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 UNQ5815/PRO19632Q6UWF5 114 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 MMD2Q8IY49 270 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 TEX45Q8NA69 505 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 CREBBPQ92793 2442 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 RCHY1Q96PM5 261 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 WDR83OSQ9Y284 106 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 MRPS16Q9Y3D3 137 aaKnown RBP8.04□□□□□ -1.12
HDAC9-225ENST00000490851 NCBP2LA6PVI3 153 aaKnown RBP8.04□□□□□ -1.12
HDAC9-225ENST00000490851 H7BYZ3 331 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 SERF2P84101 59 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 CLEC12BQ2HXU8 276 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 CD300EQ496F6 205 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-225ENST00000490851 RUSC1-AS1Q66K80 236 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 SPSB3Q6PJ21 355 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 MAPK1IP1LQ8NDC0 245 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 LYPD6BQ8NI32 183 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 ZNF418Q8TF45 676 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-225ENST00000490851 FRZBQ92765 325 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 RARRES2Q99969 163 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 SPATA25Q9BR10 227 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 CSPG4Q6UVK1 2322 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 ZFHX3Q15911 3703 aa8.04□□□□□ -1.12
HDAC9-225ENST00000490851 IGHV3-21A0A0B4J1V1 117 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 VWC2LB2RUY7 222 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 C17orf112F2Z3M2 114 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 MOSP00540 346 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 GATA3P23771 443 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 MIC13Q5XKP0 118 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 BRD3OSQ6XYD6 125 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 ACY3Q96HD9 319 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 MGST2Q99735 147 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 A0A087WX48 190 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 NBR2O15453 112 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 RS1O15537 224 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 TRGC2P03986 189 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 AMTP48728 403 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 UBE2E1P51965 193 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms