RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 HLA-DRB4P13762 266 aa22.77■■□□□ 1.24
LDB1-204ENST00000490751 GATA2P23769 480 aaPredicted RBP22.77■■□□□ 1.24
LDB1-204ENST00000490751 IAH1Q2TAA2 248 aaPredicted RBP22.77■■□□□ 1.24
LDB1-204ENST00000490751 TMEM182Q6ZP80 229 aaPredicted RBP22.77■■□□□ 1.24
LDB1-204ENST00000490751 CSNK1G2-AS1Q8NCQ2 148 aa22.77■■□□□ 1.24
LDB1-204ENST00000490751 BPIFCQ8NFQ6 507 aa22.77■■□□□ 1.24
LDB1-204ENST00000490751 MITD1Q8WV92 249 aa22.77■■□□□ 1.24
LDB1-204ENST00000490751 HLA-DRB4X5D2U9 266 aa22.77■■□□□ 1.24
LDB1-204ENST00000490751 IGHV4-28A0A0C4DH34 117 aa22.76■■□□□ 1.23
LDB1-204ENST00000490751 SMCO3A2RU48 225 aa22.76■■□□□ 1.23
LDB1-204ENST00000490751 SOCS3O14543 225 aa22.76■■□□□ 1.23
LDB1-204ENST00000490751 SCGB1D2O95969 90 aa22.76■■□□□ 1.23
LDB1-204ENST00000490751 MIFP14174 115 aa22.76■■□□□ 1.23
LDB1-204ENST00000490751 ID1P41134 155 aa22.76■■□□□ 1.23
LDB1-204ENST00000490751 GSG1LQ6UXU4 331 aa22.76■■□□□ 1.23
LDB1-204ENST00000490751 TMEM144Q7Z5S9 345 aa22.76■■□□□ 1.23
LDB1-204ENST00000490751 SMIM8Q96KF7 97 aa22.76■■□□□ 1.23
LDB1-204ENST00000490751 LINC00052Q96N35 136 aa22.76■■□□□ 1.23
LDB1-204ENST00000490751 SLC45A2Q9UMX9 530 aa22.76■■□□□ 1.23
LDB1-204ENST00000490751 X6R8D5 127 aa22.76■■□□□ 1.23
LDB1-204ENST00000490751 PMS2P5A8MQ11 134 aa22.75■■□□□ 1.23
LDB1-204ENST00000490751 RBMY1A1P0DJD3 496 aaKnown RBP22.75■■□□□ 1.23
LDB1-204ENST00000490751 RBMY1CP0DJD4 496 aa22.75■■□□□ 1.23
LDB1-204ENST00000490751 PSMB3P49720 205 aa22.75■■□□□ 1.23
LDB1-204ENST00000490751 DEFB1P60022 68 aa22.75■■□□□ 1.23
LDB1-204ENST00000490751 NUTF2P61970 127 aaKnown RBP22.75■■□□□ 1.23
LDB1-204ENST00000490751 RBMY1FQ15415 496 aaKnown RBP22.75■■□□□ 1.23
LDB1-204ENST00000490751 GDF5OSQ5U4N7 250 aa22.75■■□□□ 1.23
LDB1-204ENST00000490751 ZBTB8BQ8NAP8 495 aaPredicted RBP22.75■■□□□ 1.23
LDB1-204ENST00000490751 TBC1D24Q9ULP9 559 aa22.75■■□□□ 1.23
LDB1-204ENST00000490751 ORM2P19652 201 aa22.74■■□□□ 1.23
LDB1-204ENST00000490751 PAX9P55771 341 aa22.74■■□□□ 1.23
LDB1-204ENST00000490751 C1QTNF4Q9BXJ3 329 aa22.74■■□□□ 1.23
LDB1-204ENST00000490751 SLC25A32Q9H2D1 315 aa22.74■■□□□ 1.23
LDB1-204ENST00000490751 SLC25A22Q9H936 323 aa22.74■■□□□ 1.23
LDB1-204ENST00000490751 CCNKO75909 580 aa22.73■■□□□ 1.23
LDB1-204ENST00000490751 GSKIPQ9P0R6 139 aa22.73■■□□□ 1.23
LDB1-204ENST00000490751 XCL2Q9UBD3 114 aa22.73■■□□□ 1.23
LDB1-204ENST00000490751 ZNF98A6NK75 572 aa22.72■■□□□ 1.23
LDB1-204ENST00000490751 TMEM14EPQ6UXP3 125 aa22.72■■□□□ 1.23
LDB1-204ENST00000490751 OR1B1Q8NGR6 318 aa22.72■■□□□ 1.23
LDB1-204ENST00000490751 TMEM147Q9BVK8 224 aa22.72■■□□□ 1.23
LDB1-204ENST00000490751 TCRBP04435 133 aa22.71■■□□□ 1.23
LDB1-204ENST00000490751 METTL15P1P0C7V9 234 aa22.71■■□□□ 1.23
LDB1-204ENST00000490751 GALR1P47211 349 aa22.71■■□□□ 1.23
LDB1-204ENST00000490751 RRAS2P62070 204 aaPredicted RBP22.71■■□□□ 1.23
LDB1-204ENST00000490751 FOXI2Q6ZQN5 318 aa22.71■■□□□ 1.23
LDB1-204ENST00000490751 CYP2G1PQ6ZSU1 146 aa22.71■■□□□ 1.23
LDB1-204ENST00000490751 SAV1Q9H4B6 383 aaPredicted RBP22.71■■□□□ 1.23
LDB1-204ENST00000490751 RCL1Q9Y2P8 373 aaKnown RBP22.71■■□□□ 1.23
LDB1-204ENST00000490751 EPPK1P58107 5090 aaKnown RBP22.7■■□□□ 1.22
LDB1-204ENST00000490751 TRAV6A0A075B6T7 132 aa22.7■■□□□ 1.22
LDB1-204ENST00000490751 ISLRO14498 428 aa22.7■■□□□ 1.22
LDB1-204ENST00000490751 IGKV3-20P01619 116 aa22.7■■□□□ 1.22
LDB1-204ENST00000490751 CCSO14618 274 aa22.69■■□□□ 1.22
LDB1-204ENST00000490751 IL5P05113 134 aa22.69■■□□□ 1.22
LDB1-204ENST00000490751 MEOX2P50222 304 aa22.69■■□□□ 1.22
LDB1-204ENST00000490751 DLK1P80370 383 aa22.69■■□□□ 1.22
LDB1-204ENST00000490751 SAMD13Q5VXD3 122 aa22.69■■□□□ 1.22
LDB1-204ENST00000490751 CCDC32Q9BV29 185 aa22.69■■□□□ 1.22
LDB1-204ENST00000490751 HRH4Q9H3N8 390 aa22.69■■□□□ 1.22
LDB1-204ENST00000490751 DOK5Q9P104 306 aa22.69■■□□□ 1.22
LDB1-204ENST00000490751 TSC22D2O75157 780 aa22.68■■□□□ 1.22
LDB1-204ENST00000490751 S100A7P31151 101 aa22.68■■□□□ 1.22
LDB1-204ENST00000490751 TAS2R30P59541 319 aa22.68■■□□□ 1.22
LDB1-204ENST00000490751 C16orf92Q96LL3 132 aa22.68■■□□□ 1.22
LDB1-204ENST00000490751 RSG1Q9BU20 258 aa22.68■■□□□ 1.22
LDB1-204ENST00000490751 NUDT15Q9NV35 164 aa22.68■■□□□ 1.22
LDB1-204ENST00000490751 ELOA3CA0A087WX78 387 aaPredicted RBP22.67■■□□□ 1.22
LDB1-204ENST00000490751 OR10P1Q8NGE3 313 aa22.67■■□□□ 1.22
LDB1-204ENST00000490751 SEC22CQ9BRL7 303 aa22.67■■□□□ 1.22
LDB1-204ENST00000490751 SCRT1Q9BWW7 348 aa22.67■■□□□ 1.22
LDB1-204ENST00000490751 MBPP02686 304 aaPredicted RBP22.66■■□□□ 1.22
LDB1-204ENST00000490751 FXYD7P58549 80 aa22.66■■□□□ 1.22
LDB1-204ENST00000490751 OR4B1Q8NGF8 309 aa22.66■■□□□ 1.22
LDB1-204ENST00000490751 C17orf77Q96MU5 243 aa22.66■■□□□ 1.22
LDB1-204ENST00000490751 MGAT4CQ9UBM8 478 aa22.66■■□□□ 1.22
LDB1-204ENST00000490751 FNDC10F2Z333 226 aa22.65■■□□□ 1.22
LDB1-204ENST00000490751 F6UB75 175 aa22.65■■□□□ 1.22
LDB1-204ENST00000490751 H3BRN7 92 aa22.65■■□□□ 1.22
LDB1-204ENST00000490751 LINC00869P0C866 280 aa22.65■■□□□ 1.22
LDB1-204ENST00000490751 ZNF846Q147U1 533 aa22.65■■□□□ 1.22
LDB1-204ENST00000490751 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa22.65■■□□□ 1.22
LDB1-204ENST00000490751 ZNF431Q8TF32 576 aaPredicted RBP22.65■■□□□ 1.22
LDB1-204ENST00000490751 C20orf173Q96LM9 149 aa22.65■■□□□ 1.22
LDB1-204ENST00000490751 GPR82Q96P67 336 aa22.65■■□□□ 1.22
LDB1-204ENST00000490751 SLC25A39Q9BZJ4 359 aaPredicted RBP22.65■■□□□ 1.22
LDB1-204ENST00000490751 NPVFQ9HCQ7 196 aa22.65■■□□□ 1.22
LDB1-204ENST00000490751 C7orf66A4D0T2 115 aa22.64■■□□□ 1.21
LDB1-204ENST00000490751 HLA-DMBP28068 263 aa22.64■■□□□ 1.21
LDB1-204ENST00000490751 RAP2BP61225 183 aa22.64■■□□□ 1.21
LDB1-204ENST00000490751 SELENOTP62341 195 aa22.64■■□□□ 1.21
LDB1-204ENST00000490751 SPATA31B1PQ5VZV4 182 aa22.64■■□□□ 1.21
LDB1-204ENST00000490751 EBLN2Q6P2I7 272 aa22.64■■□□□ 1.21
LDB1-204ENST00000490751 C2CD4CQ8TF44 421 aa22.64■■□□□ 1.21
LDB1-204ENST00000490751 CLUHP3Q96NS8 147 aa22.64■■□□□ 1.21
LDB1-204ENST00000490751 RPRMQ9NS64 109 aa22.64■■□□□ 1.21
LDB1-204ENST00000490751 HIGD1AQ9Y241 93 aa22.64■■□□□ 1.21
LDB1-204ENST00000490751 FAM25EA8MYX2 175 aa22.63■■□□□ 1.21
LDB1-204ENST00000490751 SHANK2-AS3Q9BTD1 123 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms