RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CFAP54Q96N23 3096 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 MUC22E2RYF6 1773 aaPredicted RBP3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 TRAV5A0A0B4J249 113 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 NPIPB5A8MRT5 1133 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 CCDC179H3BU77 68 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 PEX7O00628 323 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 CSN3P07498 182 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 IFITM1P13164 125 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 CA6P23280 308 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 CD24P25063 80 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 DUTP33316 252 aaKnown RBP3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 MEOX1P50221 254 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 ATP5J2P56134 94 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 TFF2Q03403 129 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 RUNX3Q13761 415 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 TTC32Q5I0X7 151 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 AMTNQ6UX39 209 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 LINC00696Q6ZRV3 163 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 NFE4Q86UQ8 179 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 PTH2Q96A98 100 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 ZNF414Q96IQ9 312 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 RITA1Q96K30 269 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 LINC00479Q96M42 142 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 SLC25A33Q9BSK2 321 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 MRPL32Q9BYC8 188 aaKnown RBP3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 OR2H1Q9GZK4 316 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 TCF19Q9Y242 345 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 KLF12Q9Y4X4 402 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 TIMM8BQ9Y5J9 83 aaPredicted RBP3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 DCHS1Q96JQ0 3298 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 NCKAP5O14513 1909 aa3.84□□□□□ -1.79
SNRNP40-206ENST00000489853 ZFHX4Q86UP3 3567 aa3.84□□□□□ -1.8
SNRNP40-206ENST00000489853 C5orf42Q9H799 3197 aa3.84□□□□□ -1.8
SNRNP40-206ENST00000489853 TRGV8A0A0C4DH27 118 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 OTOL1A6NHN0 477 aaPredicted RBP3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 SRRM4A7MD48 611 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 M0QXV9 152 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 KLK10O43240 276 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 P01737 135 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 ZNF688P0C7X2 276 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 B4GALT1P15291 398 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 ZNF32P17041 273 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 PRTN3P24158 256 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 CACNG7P62955 275 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 PCOLCEQ15113 449 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 C3AR1Q16581 482 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 PRR30Q53SZ7 412 aaPredicted RBP3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 PIP4P1Q86T03 277 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 ZNF329Q86UD4 541 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 GATD1Q8NB37 220 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 TET1Q8NFU7 2136 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 SLC37A2Q8TED4 501 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 NRGNQ92686 78 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 RPEQ96AT9 228 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 IFI27L1Q96BM0 104 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 CARD19Q96LW7 228 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 FGF23Q9GZV9 251 aaPredicted RBP3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 KLRF1Q9NZS2 232 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 WDR87Q6ZQQ6 2873 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 USF3Q68DE3 2245 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 ZNF407Q9C0G0 2248 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 TRBV25-1A0A075B6N4 114 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 A0A096LNJ9 63 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 C19orf71A6NCJ1 209 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 C16orf97H3BN30 126 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 NDUFS7O75251 213 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 FCN3O75636 299 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 LTAP01374 205 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 CXCL10P02778 98 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 EVI2AP22794 236 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 PPIFP30405 207 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 ASIPP42127 132 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 ZNF137PP52743 207 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 ATP5IP56385 69 aaPredicted RBP3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 DSCR4P56555 118 aaPredicted RBP3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 YPEL5P62699 121 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 HHEXQ03014 270 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 DNAH14Q0VDD8 3507 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 FHL3Q13643 280 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 OR1C1Q15619 314 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 ADIPOQQ15848 244 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 SLC25A48Q6ZT89 311 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 YRDCQ86U90 279 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 TEN1Q86WV5 123 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 TMEM158Q8WZ71 300 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 RND1Q92730 232 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 DLX4Q92988 240 aaPredicted RBP3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 DAZAP1Q96EP5 407 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 FAM167A-AS1Q96KT0 104 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 VKORC1Q9BQB6 163 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 MLST8Q9BVC4 326 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 FAM234AQ9H0X4 552 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 TMEM160Q9NX00 188 aa3.83□□□□□ -1.8
SNRNP40-206ENST00000489853 SEC16AO15027 2179 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 UNC13CQ8NB66 2214 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 DIDO1Q9BTC0 2240 aaKnown RBP3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 MBD3L4A6NDZ8 208 aaPredicted RBP3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 MBD3L3A6NE82 208 aaPredicted RBP3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 LINC01619G3V211 115 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 255.6 ms