RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 SNCAP37840 140 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 HOXA1P49639 335 aaPredicted RBP5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 RAB9AP51151 201 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 ZNF134P52741 427 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 APOC4P55056 127 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 AKR1C1Q04828 323 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 GUK1Q16774 197 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 TMEM14EPQ6UXP3 125 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 SSX9Q7RTT3 188 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 ABHD12Q8N2K0 398 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 C8orf31Q8N9H6 132 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 ZNF439Q8NDP4 499 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 OR9G4Q8NGQ1 327 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 LYPD6BQ8NI32 183 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 RHOVQ96L33 236 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 NKX6-2Q9C056 277 aaPredicted RBP5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 KCNIP2Q9NS61 270 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 TMEM140Q9NV12 185 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 PRNDQ9UKY0 176 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 TMA7Q9Y2S6 64 aaKnown RBP5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 TIMM9Q9Y5J7 89 aa5.41□□□□□ -1.54
EXOSC3-206ENST00000489414 A0A1B0GW64 132 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 A0A1W2PPE3 182 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 C15orf61A6NNL5 157 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 H7C2Y5 167 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 MPDU1O75352 247 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 SCO1O75880 301 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 IFNA1P01562 189 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 SFTA3P0C7M3 94 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 OR9G9P0C7N8 305 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 FGF7P21781 194 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 PRRX1P54821 245 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 ATP5IP56385 69 aaPredicted RBP5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 BRWD1-AS2P59051 145 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 OR2B8PP59922 312 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 BTN1A1Q13410 526 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 ZNF124Q15973 351 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 RNF212Q495C1 297 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 AARDQ4LEZ3 155 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 TMEM41BQ5BJD5 291 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 CDPF1Q6NVV7 123 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 Q6ZTC4 211 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 TCF23Q7RTU1 214 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 LINC00311Q8N616 119 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 OR9G1Q8NH87 305 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 VSTM2AQ8TAG5 236 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 OSR1Q8TAX0 266 aaPredicted RBP5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 SFT2D1Q8WV19 159 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 ZNF251Q9BRH9 671 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 GGACTQ9BVM4 153 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 CLEC7AQ9BXN2 247 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 QTRT1Q9BXR0 403 aaKnown RBP5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 WDR61Q9GZS3 305 aaKnown RBP5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 TMEM231Q9H6L2 316 aa5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 FOXA2Q9Y261 457 aaPredicted RBP5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 CARHSP1Q9Y2V2 147 aaKnown RBP5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 AMMECR1Q9Y4X0 333 aaPredicted RBP5.4□□□□□ -1.54
EXOSC3-206ENST00000489414 TRAV1-1A0A0B4J248 108 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 NBDYA0A0U1RRE5 68 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 SMCO3A2RU48 225 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 J3QR06 171 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 PROP1O75360 226 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 CD5P06127 495 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 CSN3P07498 182 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 TMEM11P17152 192 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 MC5RP33032 325 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 PPT1P50897 306 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 HSPE1P61604 102 aaKnown RBP5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 RAB31Q13636 194 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 POU2AF1Q16633 256 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 C10orf91Q5T1B1 145 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 OR4A47Q6IF82 309 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 ZNF833PQ6ZTB9 187 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 PDPNQ86YL7 162 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 TGIF2LXQ8IUE1 241 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 ODF3L1Q8IXM7 274 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 PUSL1Q8N0Z8 303 aaKnown RBP5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 ZNF383Q8NA42 475 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 C15orf53Q8NAA6 179 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 OR4A5Q8NH83 315 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 HARBI1Q96MB7 349 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 RSG1Q9BU20 258 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 HINT2Q9BX68 163 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 SLC35B3Q9H1N7 401 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 SLC39A9Q9NUM3 307 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 ZNF257Q9Y2Q1 563 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 WASHC3Q9Y3C0 194 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 OR51B2Q9Y5P1 312 aa5.39□□□□□ -1.55
EXOSC3-206ENST00000489414 A0A087X0M5 115 aa5.38□□□□□ -1.55
EXOSC3-206ENST00000489414 A0A1B0GV50 99 aa5.38□□□□□ -1.55
EXOSC3-206ENST00000489414 A0A1B0GX30 115 aa5.38□□□□□ -1.55
EXOSC3-206ENST00000489414 RBFOX3A6NFN3 312 aa5.38□□□□□ -1.55
EXOSC3-206ENST00000489414 C15orf62A8K5M9 175 aa5.38□□□□□ -1.55
EXOSC3-206ENST00000489414 TSPAN4O14817 238 aa5.38□□□□□ -1.55
EXOSC3-206ENST00000489414 MMP23AO75900 390 aa5.38□□□□□ -1.55
EXOSC3-206ENST00000489414 KBTBD11O94819 623 aa5.38□□□□□ -1.55
EXOSC3-206ENST00000489414 CT45A6P0DMU7 189 aa5.38□□□□□ -1.55
EXOSC3-206ENST00000489414 CT45A5P0DMU8 189 aa5.38□□□□□ -1.55
EXOSC3-206ENST00000489414 CT45A7P0DMV0 189 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms