RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 LINC00301Q8NCQ3 95 aa1.63□□□□□ -2.15
XRN1-213ENST00000489241 SLC25A21Q9BQT8 299 aaPredicted RBP1.63□□□□□ -2.15
XRN1-213ENST00000489241 ADAT1Q9BUB4 502 aaKnown RBP1.63□□□□□ -2.15
XRN1-213ENST00000489241 MAP1LC3BQ9GZQ8 125 aa1.63□□□□□ -2.15
XRN1-213ENST00000489241 OR5AC2Q9NZP5 309 aa1.63□□□□□ -2.15
XRN1-213ENST00000489241 PBRM1Q86U86 1689 aa1.63□□□□□ -2.15
XRN1-213ENST00000489241 TRAV12-1A0A0B4J245 112 aa1.62□□□□□ -2.15
XRN1-213ENST00000489241 TLCD2A6NGC4 264 aa1.62□□□□□ -2.15
XRN1-213ENST00000489241 PROSCO94903 275 aa1.62□□□□□ -2.15
XRN1-213ENST00000489241 IFNA14P01570 189 aa1.62□□□□□ -2.15
XRN1-213ENST00000489241 CXCL1P09341 107 aa1.62□□□□□ -2.15
XRN1-213ENST00000489241 BRS3P32247 399 aa1.62□□□□□ -2.15
XRN1-213ENST00000489241 SMIM15Q7Z3B0 74 aa1.62□□□□□ -2.15
XRN1-213ENST00000489241 C15orf53Q8NAA6 179 aa1.62□□□□□ -2.15
XRN1-213ENST00000489241 DYDC1Q8WWB3 177 aa1.62□□□□□ -2.15
XRN1-213ENST00000489241 NAA38Q9BRA0 125 aaKnown RBP1.62□□□□□ -2.15
XRN1-213ENST00000489241 NPCDR1Q9BY65 106 aa1.62□□□□□ -2.15
XRN1-213ENST00000489241 C14orf132Q9NPU4 83 aa1.62□□□□□ -2.15
XRN1-213ENST00000489241 MRPL40Q9NQ50 206 aaKnown RBP1.62□□□□□ -2.15
XRN1-213ENST00000489241 OR52A1Q9UKL2 312 aa1.62□□□□□ -2.15
XRN1-213ENST00000489241 BAZ2BQ9UIF8 2168 aaKnown RBP1.61□□□□□ -2.15
XRN1-213ENST00000489241 A8MWV9 139 aa1.61□□□□□ -2.15
XRN1-213ENST00000489241 IFNA21P01568 189 aa1.61□□□□□ -2.15
XRN1-213ENST00000489241 HLA-EP13747 358 aa1.61□□□□□ -2.15
XRN1-213ENST00000489241 TFAMQ00059 246 aaKnown RBP1.61□□□□□ -2.15
XRN1-213ENST00000489241 DR1Q01658 176 aa1.61□□□□□ -2.15
XRN1-213ENST00000489241 MYL5Q02045 173 aa1.61□□□□□ -2.15
XRN1-213ENST00000489241 FKBP1CQ5VVH2 108 aa1.61□□□□□ -2.15
XRN1-213ENST00000489241 EIF5AL1Q6IS14 154 aaKnown RBP1.61□□□□□ -2.15
XRN1-213ENST00000489241 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.61□□□□□ -2.15
XRN1-213ENST00000489241 OR10K1Q8NGX5 313 aa1.61□□□□□ -2.15
XRN1-213ENST00000489241 CARD19Q96LW7 228 aa1.61□□□□□ -2.15
XRN1-213ENST00000489241 RTL8AQ9BWD3 113 aa1.61□□□□□ -2.15
XRN1-213ENST00000489241 REG4Q9BYZ8 158 aa1.61□□□□□ -2.15
XRN1-213ENST00000489241 C6orf62Q9GZU0 229 aaPredicted RBP1.61□□□□□ -2.15
XRN1-213ENST00000489241 POPDC3Q9HBV1 291 aa1.61□□□□□ -2.15
XRN1-213ENST00000489241 DENND4CQ5VZ89 1909 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 CD109Q6YHK3 1445 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 A0A1W2PRE2 83 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 ODAMA1E959 279 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 MRPS14O60783 128 aaKnown RBP1.6□□□□□ -2.15
XRN1-213ENST00000489241 ARPP19P56211 112 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 CDK5R1Q15078 307 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 MSMO1Q15800 293 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 C1orf140Q5VVS0 124 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 PATE2Q6UY27 113 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 PPTC7Q8NI37 304 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 TEX47Q8TBZ9 253 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 SFT2D1Q8WV19 159 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 LINC00467Q9BRT7 94 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 DDA1Q9BW61 102 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 MED11Q9P086 117 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 COL11A1P12107 1806 aaPredicted RBP1.6□□□□□ -2.15
XRN1-213ENST00000489241 CEP164Q9UPV0 1460 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 COL4A5P29400 1685 aa1.6□□□□□ -2.15
XRN1-213ENST00000489241 SDK1Q7Z5N4 2213 aa1.59□□□□□ -2.15
XRN1-213ENST00000489241 SBF1O95248 1867 aa1.59□□□□□ -2.15
XRN1-213ENST00000489241 TMBIM6P55061 237 aa1.59□□□□□ -2.15
XRN1-213ENST00000489241 ROMO1P60602 79 aa1.59□□□□□ -2.15
XRN1-213ENST00000489241 RNF11Q9Y3C5 154 aa1.59□□□□□ -2.15
XRN1-213ENST00000489241 ASB4Q9Y574 426 aa1.59□□□□□ -2.15
XRN1-213ENST00000489241 SORL1Q92673 2214 aa1.59□□□□□ -2.16
XRN1-213ENST00000489241 FBN1P35555 2871 aaKnown RBP1.58□□□□□ -2.16
XRN1-213ENST00000489241 B4DSR2 109 aa1.58□□□□□ -2.16
XRN1-213ENST00000489241 K7ERJ3 54 aa1.58□□□□□ -2.16
XRN1-213ENST00000489241 RAB4BP61018 213 aa1.58□□□□□ -2.16
XRN1-213ENST00000489241 RTL8BQ17RB0 113 aa1.58□□□□□ -2.16
XRN1-213ENST00000489241 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.58□□□□□ -2.16
XRN1-213ENST00000489241 IFT20Q8IY31 132 aa1.58□□□□□ -2.16
XRN1-213ENST00000489241 C12orf29Q8N999 325 aa1.58□□□□□ -2.16
XRN1-213ENST00000489241 RMND5BQ96G75 393 aaPredicted RBP1.58□□□□□ -2.16
XRN1-213ENST00000489241 RETNLBQ9BQ08 111 aa1.58□□□□□ -2.16
XRN1-213ENST00000489241 CYSTM1Q9H1C7 97 aa1.58□□□□□ -2.16
XRN1-213ENST00000489241 SOX21Q9Y651 276 aaPredicted RBP1.58□□□□□ -2.16
XRN1-213ENST00000489241 FREM1Q5H8C1 2179 aa1.58□□□□□ -2.16
XRN1-213ENST00000489241 TECPR2O15040 1411 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 CAMSAP2Q08AD1 1489 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 RP1P56715 2156 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 TRAV5A0A0B4J249 113 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 GNG14A0A1W2PPG7 69 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 DHFRP00374 187 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 PLCXD2Q0VAA5 305 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 C1orf137Q5JT78 98 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 UNQ6190/PRO20217Q6UXQ8 127 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 OR2T35Q8NGX2 323 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 OR4C6Q8NH72 309 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 ZC2HC1AQ96GY0 325 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 ZNF714Q96N38 554 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 OTORQ9NRC9 128 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 MED9Q9NWA0 146 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 LAMTOR3Q9UHA4 124 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 NDUFAF1Q9Y375 327 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 NUBP2Q9Y5Y2 271 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 COL4A1P02462 1669 aa1.57□□□□□ -2.16
XRN1-213ENST00000489241 OBSL1O75147 1896 aa1.56□□□□□ -2.16
XRN1-213ENST00000489241 H7BYZ3 331 aa1.56□□□□□ -2.16
XRN1-213ENST00000489241 PRB1P04280 392 aa1.56□□□□□ -2.16
XRN1-213ENST00000489241 SURF2Q15527 256 aaPredicted RBP1.56□□□□□ -2.16
XRN1-213ENST00000489241 TAC4Q86UU9 113 aa1.56□□□□□ -2.16
XRN1-213ENST00000489241 PRR15Q8IV56 129 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms