RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 FGF6P10767 208 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 HCFC1P51610 2035 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 PLXNA3P51805 1871 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 TMEM187Q14656 261 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 SPANXN4Q5MJ08 99 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 FAM27D1Q5T7N8 215 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 LYRM7Q5U5X0 104 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 NOXRED1Q6NXP6 359 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 IGFL2Q6UWQ7 119 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 TMEM150AQ86TG1 271 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 ZNF645Q8N7E2 425 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 TMEM99Q8N816 258 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 OR10AC1Q8NH08 325 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 LMX1AQ8TE12 382 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 ZNF721Q8TF20 911 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 TMEM255BQ8WV15 326 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 APOOQ9BUR5 198 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 ZNF442Q9H7R0 627 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 KCNIP2Q9NS61 270 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 CACNG5Q9UF02 275 aa4.25□□□□□ -1.73
COPS3-209ENST00000486810 TRAV12-2A0A075B6T6 113 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 TRAV27A0A087WT01 109 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 TRAV13-1A0A0B4J241 112 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 TRAV26-2A0A0B4J265 109 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 TMEM150CB9EJG8 249 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 LINC01565O15544 149 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 LGALS2P05162 132 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 PYYP10082 97 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 FKBP2P26885 142 aaKnown RBP4.24□□□□□ -1.73
COPS3-209ENST00000486810 MAGEA5P43359 124 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 ZNF791Q3KP31 576 aaPredicted RBP4.24□□□□□ -1.73
COPS3-209ENST00000486810 PHLDA2Q53GA4 152 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 DMRTC1Q5HYR2 192 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 FAM201AQ5SY85 155 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 HES3Q5TGS1 186 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 Q6ZRU5 148 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 Q71RC1 249 aaPredicted RBP4.24□□□□□ -1.73
COPS3-209ENST00000486810 RPS27LQ71UM5 84 aaKnown RBP4.24□□□□□ -1.73
COPS3-209ENST00000486810 AAED1Q7RTV5 226 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 VKORC1L1Q8N0U8 176 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 CEND1Q8N111 149 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 RYBPQ8N488 228 aaPredicted RBP4.24□□□□□ -1.73
COPS3-209ENST00000486810 C15orf53Q8NAA6 179 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 RNF128Q8TEB7 428 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 FGF13Q92913 245 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 UBE2E3Q969T4 207 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 ABHD14BQ96IU4 210 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 TMEM147Q9BVK8 224 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 TNFRSF19Q9NS68 423 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 Q9UF83 564 aa4.24□□□□□ -1.73
COPS3-209ENST00000486810 TRAV18A0A075B6X5 111 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 A0A0J9YW62 118 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 A0A1W2PPK0 400 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 EFNA2O43921 213 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 SSSCA1O60232 199 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 NUDT14O95848 222 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 HLA-DQA1P01909 254 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 CFC1BP0CG36 223 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 CFC1P0CG37 223 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 COL8A2P25067 703 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 RPS11P62280 158 aaKnown RBP eCLIP4.23□□□□□ -1.73
COPS3-209ENST00000486810 Q6P435 159 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 POM121L12Q8N7R1 296 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 H1FXQ92522 213 aaKnown RBP4.23□□□□□ -1.73
COPS3-209ENST00000486810 PDFQ9HBH1 243 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 IL36BQ9NZH7 164 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 GNG13Q9P2W3 67 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 TMED7Q9Y3B3 224 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 LY96Q9Y6Y9 160 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 OBSL1O75147 1896 aa4.23□□□□□ -1.73
COPS3-209ENST00000486810 LOC285556D6RIA3 1793 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 KCPQ6ZWJ8 1503 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 SMIM26A0A096LP01 95 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 A0A0U1RQV1 116 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 A0A1B0GTH9 108 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 FAM240AA0A1B0GVK7 77 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 RBAKDNA6NC62 111 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 IZUMO1RA6ND01 250 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 FAM24AA6NFZ4 105 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 F2Z2F3 143 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 K7EQS6 105 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 IGHV4-39P01824 125 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 PEBP1P30086 187 aaKnown RBP4.22□□□□□ -1.73
COPS3-209ENST00000486810 SFTPDP35247 375 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 CSN1S1P47710 185 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 SERF2P84101 59 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 C12orf74Q32Q52 190 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 VMA21Q3ZAQ7 101 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 LINC01545Q5VT33 79 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 FKBP1CQ5VVH2 108 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 C22orf39Q6P5X5 142 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 LINC00311Q8N616 119 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 KLHDC9Q8NEP7 349 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 OR2A1Q8NGT9 310 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 SRSF12Q8WXF0 261 aaKnown RBP4.22□□□□□ -1.73
COPS3-209ENST00000486810 DLX4Q92988 240 aaPredicted RBP4.22□□□□□ -1.73
COPS3-209ENST00000486810 CHCHD1Q96BP2 118 aaKnown RBP4.22□□□□□ -1.73
COPS3-209ENST00000486810 FMC1Q96HJ9 113 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 FAM19A4Q96LR4 140 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 C2orf48Q96LS8 159 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms