RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 OTORQ9NRC9 128 aa9.38□□□□□ -0.91
PKP4-213ENST00000486254 BEX4Q9NWD9 120 aaPredicted RBP9.38□□□□□ -0.91
PKP4-213ENST00000486254 FAM208BQ5VWN6 2430 aa9.38□□□□□ -0.91
PKP4-213ENST00000486254 COL12A1Q99715 3063 aa9.38□□□□□ -0.91
PKP4-213ENST00000486254 ATP6V0E1O15342 81 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 HIST1H2BKO60814 126 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 NDUFB8O95169 186 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 IGLV2-8P01709 118 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 HIST1H2BJP06899 126 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 HIST1H2BOP23527 126 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 HIST1H2BBP33778 126 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 HIST1H2BDP58876 126 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 HIST1H2BCP62807 126 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 HIST2H2BEQ16778 126 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 SMUG1Q53HV7 270 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.37□□□□□ -0.91
PKP4-213ENST00000486254 NECAP1Q8NC96 275 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 PIFOQ8TCI5 191 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 HIST1H2BHQ93079 126 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 HIST1H2BNQ99877 126 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 HIST1H2BMQ99879 126 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 IL36BQ9NZH7 164 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 EPDR1Q9UM22 224 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 A0A1W2PPQ1 181 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 PGPEP1LA6NFU8 196 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 H3BUA1 57 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 TRGC2P03986 189 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 IGLC2P0DOY2 106 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 RAB9AP51151 201 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 SNRPEP62304 92 aaKnown RBP9.37□□□□□ -0.91
PKP4-213ENST00000486254 RPL19P84098 196 aaKnown RBP9.37□□□□□ -0.91
PKP4-213ENST00000486254 CLEC12BQ2HXU8 276 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 COX19Q49B96 90 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 UNQ5815/PRO19632Q6UWF5 114 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 OR4F17Q8NGA8 305 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 ZNF502Q8TBZ5 544 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 FMC1Q96HJ9 113 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 CHRDL1Q9BU40 450 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 GSX1Q9H4S2 264 aaPredicted RBP9.37□□□□□ -0.91
PKP4-213ENST00000486254 PITPNC1Q9UKF7 332 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 V9GYV3 84 aa9.37□□□□□ -0.91
PKP4-213ENST00000486254 FAM223BA6NKX1 122 aa9.36□□□□□ -0.91
PKP4-213ENST00000486254 MRPS12O15235 138 aaKnown RBP9.36□□□□□ -0.91
PKP4-213ENST00000486254 TACC2O95359 2948 aa9.36□□□□□ -0.91
PKP4-213ENST00000486254 IGF1P05019 195 aa9.36□□□□□ -0.91
PKP4-213ENST00000486254 IL4P05112 153 aa9.36□□□□□ -0.91
PKP4-213ENST00000486254 CTSGP08311 255 aa9.36□□□□□ -0.91
PKP4-213ENST00000486254 LOXL1Q08397 574 aaPredicted RBP9.36□□□□□ -0.91
PKP4-213ENST00000486254 Q56UQ5 140 aa9.36□□□□□ -0.91
PKP4-213ENST00000486254 KLF17Q5JT82 389 aaPredicted RBP9.36□□□□□ -0.91
PKP4-213ENST00000486254 COA6Q5JTJ3 125 aaKnown RBP9.36□□□□□ -0.91
PKP4-213ENST00000486254 ACTL10Q5JWF8 245 aa9.36□□□□□ -0.91
PKP4-213ENST00000486254 FAM223AQ8IWN6 122 aa9.36□□□□□ -0.91
PKP4-213ENST00000486254 LINC01356Q8N9X3 169 aa9.36□□□□□ -0.91
PKP4-213ENST00000486254 TMUB1Q9BVT8 246 aa9.36□□□□□ -0.91
PKP4-213ENST00000486254 Q9H3A6 140 aa9.36□□□□□ -0.91
PKP4-213ENST00000486254 C7orf69Q9H7B7 122 aa9.36□□□□□ -0.91
PKP4-213ENST00000486254 FBXL7Q9UJT9 491 aa9.36□□□□□ -0.91
PKP4-213ENST00000486254 TRBV19A0A075B6N1 114 aa9.35□□□□□ -0.91
PKP4-213ENST00000486254 TRBV7-1A0A0A6YYK4 115 aa9.35□□□□□ -0.91
PKP4-213ENST00000486254 A0A0U1RQK1 487 aa9.35□□□□□ -0.91
PKP4-213ENST00000486254 SERTM2A0A1B0GWG4 89 aa9.35□□□□□ -0.91
PKP4-213ENST00000486254 ZNF253O75346 499 aa9.35□□□□□ -0.91
PKP4-213ENST00000486254 OR2J3O76001 311 aa9.35□□□□□ -0.91
PKP4-213ENST00000486254 SLC25A5P05141 298 aaKnown RBP9.35□□□□□ -0.91
PKP4-213ENST00000486254 HOXA5P20719 270 aa9.35□□□□□ -0.91
PKP4-213ENST00000486254 HIF1ANQ9NWT6 349 aa9.35□□□□□ -0.91
PKP4-213ENST00000486254 PGPA6NDG6 321 aa9.34□□□□□ -0.91
PKP4-213ENST00000486254 A6NDX4 124 aa9.34□□□□□ -0.91
PKP4-213ENST00000486254 ZNF98A6NK75 572 aa9.34□□□□□ -0.91
PKP4-213ENST00000486254 TCRAP04437 139 aa9.34□□□□□ -0.91
PKP4-213ENST00000486254 AMY1AP04745 511 aa9.34□□□□□ -0.91
PKP4-213ENST00000486254 RPL7P18124 248 aaKnown RBP9.34□□□□□ -0.91
PKP4-213ENST00000486254 ERVFC1-1P60608 527 aa9.34□□□□□ -0.91
PKP4-213ENST00000486254 RANP62826 216 aaKnown RBP9.34□□□□□ -0.91
PKP4-213ENST00000486254 FABP9Q0Z7S8 132 aa9.34□□□□□ -0.91
PKP4-213ENST00000486254 USF2Q15853 346 aaPredicted RBP9.34□□□□□ -0.91
PKP4-213ENST00000486254 RPEL1Q2QD12 228 aa9.34□□□□□ -0.91
PKP4-213ENST00000486254 LINC00518Q8N0U6 118 aa9.34□□□□□ -0.91
PKP4-213ENST00000486254 OR5T1Q8NG75 326 aa9.34□□□□□ -0.91
PKP4-213ENST00000486254 FRZBQ92765 325 aa9.34□□□□□ -0.91
PKP4-213ENST00000486254 GPR82Q96P67 336 aa9.34□□□□□ -0.91
PKP4-213ENST00000486254 AURKAIP1Q9NWT8 199 aaPredicted RBP9.34□□□□□ -0.91
PKP4-213ENST00000486254 ZNF586Q9NXT0 402 aa9.34□□□□□ -0.91
PKP4-213ENST00000486254 FBLL1A6NHQ2 334 aaKnown RBP9.33□□□□□ -0.92
PKP4-213ENST00000486254 BMPR1BO00238 502 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 LTAP01374 205 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 IGHG2P01859 326 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 SMIM6P0DI80 62 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 IGHV4-38-2P0DP08 117 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 CDX1P47902 265 aaPredicted RBP9.33□□□□□ -0.92
PKP4-213ENST00000486254 RPL15P61313 204 aaKnown RBP9.33□□□□□ -0.92
PKP4-213ENST00000486254 UBE2G1P62253 170 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 RHOGP84095 191 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 ECSCRQ19T08 205 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 C15orf32Q32M92 178 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 CT83Q5H943 113 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 BAGE2Q86Y30 109 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 EEF1AKMT3Q96AZ1 226 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 MLST8Q9BVC4 326 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms