RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 S100A4P26447 101 aaKnown RBP1.31□□□□□ -2.2
ITGB1-213ENST00000484088 P2RX1P51575 399 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 FOXA3P55318 350 aaPredicted RBP1.31□□□□□ -2.2
ITGB1-213ENST00000484088 GFERP55789 205 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 MP68P56378 58 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 ATP5EP56381 51 aaPredicted RBP1.31□□□□□ -2.2
ITGB1-213ENST00000484088 TAS2R45P59539 299 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 RPS11P62280 158 aaKnown RBP eCLIP1.31□□□□□ -2.2
ITGB1-213ENST00000484088 QRFPP83859 136 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 SYCNQ0VAF6 134 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 Q0VG73 95 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 ZNF345Q14585 488 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 CDK5R1Q15078 307 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 UBE2SQ16763 222 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 MRPL2Q5T653 305 aaKnown RBP1.31□□□□□ -2.2
ITGB1-213ENST00000484088 FAM222AQ5U5X8 452 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 C22orf39Q6P5X5 142 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 ZNF322Q6U7Q0 402 aaPredicted RBP1.31□□□□□ -2.2
ITGB1-213ENST00000484088 UNQ5815/PRO19632Q6UWF5 114 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 DPPA3Q6W0C5 159 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 Q6ZS49 121 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 H2AFVQ71UI9 128 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 AAED1Q7RTV5 226 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 VN1R4Q7Z5H5 301 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 WDR86Q86TI4 376 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 C1orf174Q8IYL3 243 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 C10orf111Q8N326 155 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 SLC22A24Q8N4F4 322 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 RNF182Q8N6D2 247 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 SIGLECL1Q8N7X8 197 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 C15orf53Q8NAA6 179 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 C11orf72Q8NBR9 251 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 ZNF555Q8NEP9 628 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 OR10P1Q8NGE3 313 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 OR10AG1Q8NH19 301 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 BRK1Q8WUW1 75 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 TOMM6Q96B49 74 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 FAM3DQ96BQ1 224 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 RBMXL1Q96E39 390 aaKnown RBP1.31□□□□□ -2.2
ITGB1-213ENST00000484088 DPH3Q96FX2 82 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 IGF2BP2-AS1Q96M15 143 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 YPEL2Q96QA6 119 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 GPX7Q96SL4 187 aaPredicted RBP1.31□□□□□ -2.2
ITGB1-213ENST00000484088 MGST2Q99735 147 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 PRSS27Q9BQR3 290 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 NPVFQ9HCQ7 196 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 FAM60AQ9NP50 221 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 TMEM100Q9NV29 134 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 ANAPC10Q9UM13 185 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 AMMECR1Q9Y4X0 333 aaPredicted RBP1.31□□□□□ -2.2
ITGB1-213ENST00000484088 SERP1Q9Y6X1 66 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 CTTNBP2Q8WZ74 1663 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 COL1A2P08123 1366 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 TECPR2O15040 1411 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 ADAMTS13Q76LX8 1427 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 ANKRD50Q9ULJ7 1429 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 NKTRP30414 1462 aaKnown RBP1.31□□□□□ -2.2
ITGB1-213ENST00000484088 IQSEC2Q5JU85 1478 aa1.31□□□□□ -2.2
ITGB1-213ENST00000484088 ZNFX1Q9P2E3 1918 aaKnown RBP1.3□□□□□ -2.2
ITGB1-213ENST00000484088 SYNJ1O43426 1573 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 TET2Q6N021 2002 aaPredicted RBP1.3□□□□□ -2.2
ITGB1-213ENST00000484088 KIF14Q15058 1648 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 KIAA1551Q9HCM1 1747 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 TRBV20OR9-2A0A075B6H5 130 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 IGHV5-10-1A0A0J9YXX1 117 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 TRBV27A0A0K0K1C4 114 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 LOC389332A0A1B0GUA5 103 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 A0A1B0GW54 56 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 A0A1W2PP18 115 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 NAP1L6A6NFF2 107 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 C17orf112F2Z3M2 114 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 COX7A2P2O60397 106 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 UBL3O95164 117 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 SIX6O95475 246 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 IGKV1D-16P01601 117 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 GYPBP06028 91 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 SFTA3P0C7M3 94 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 HLA-DRB4P13762 266 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 CCL1P22362 96 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 FKBP2P26885 142 aaKnown RBP1.3□□□□□ -2.2
ITGB1-213ENST00000484088 HINT1P49773 126 aaPredicted RBP1.3□□□□□ -2.2
ITGB1-213ENST00000484088 ZNF83P51522 516 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 SMIM11AP58511 58 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 KRTDAPP60985 99 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 YPEL3P61236 119 aaPredicted RBP1.3□□□□□ -2.2
ITGB1-213ENST00000484088 NPC2P61916 151 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 RPS23P62266 143 aaKnown RBP1.3□□□□□ -2.2
ITGB1-213ENST00000484088 ERCC8Q13216 396 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 PNOCQ13519 176 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 EIF4EBP1Q13541 118 aaPredicted RBP1.3□□□□□ -2.2
ITGB1-213ENST00000484088 ZNF141Q15928 474 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 LGALS9BQ3B8N2 356 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 SPATA45Q537H7 98 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 PYDC2Q56P42 97 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 ZNF678Q5SXM1 525 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 Q5XG85 94 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 C12orf73Q69YU5 71 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 ZNF660Q6AZW8 331 aaPredicted RBP1.3□□□□□ -2.2
ITGB1-213ENST00000484088 XAF1Q6GPH4 301 aa1.3□□□□□ -2.2
ITGB1-213ENST00000484088 TIFABQ6ZNK6 161 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms