RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 SLC25A21Q9BQT8 299 aaPredicted RBP-0.02□□□□□ -2.41
KDM1A-204ENST00000481879 FAM103A1Q9BTL3 118 aaKnown RBP-0.02□□□□□ -2.41
KDM1A-204ENST00000481879 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.02□□□□□ -2.41
KDM1A-204ENST00000481879 MED29Q9NX70 200 aa-0.02□□□□□ -2.41
KDM1A-204ENST00000481879 NOSIPQ9Y314 301 aaKnown RBP-0.02□□□□□ -2.41
KDM1A-204ENST00000481879 LY96Q9Y6Y9 160 aa-0.02□□□□□ -2.41
KDM1A-204ENST00000481879 TRAV23DV6A0A075B6W5 121 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 NUPR2A6NF83 97 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 A8MWV9 139 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 J3QRK9 145 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 NDUFB3O43676 98 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 TCRBP04435 133 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 SERPINB9P50453 376 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 DSCR4P56555 118 aaPredicted RBP-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 LSM6P62312 80 aaKnown RBP-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 RRN3P1Q2M238 152 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 C6orf52Q5T4I8 152 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 C4orf22Q6V702 233 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 OR51A2Q8NGJ7 313 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 OR5D14Q8NGL3 314 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 TSKUQ8WUA8 353 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 ZC2HC1AQ96GY0 325 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 LYSMD1Q96S90 227 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 GGACTQ9BVM4 153 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 TRIM4Q9C037 500 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 EML6Q6ZMW3 1958 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 TNRC6AQ8NDV7 1962 aaKnown RBP-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 CCDC88AQ3V6T2 1871 aa-0.03□□□□□ -2.41
KDM1A-204ENST00000481879 MUC12Q9UKN1 5478 aa-0.03□□□□□ -2.42
KDM1A-204ENST00000481879 ZFYVE9O95405 1425 aa-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 DOCK3Q8IZD9 2030 aa-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 HECW1Q76N89 1606 aa-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 TRGV10A0A0A0MS01 117 aa-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 C5orf67F2Z3F1 127 aa-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 RPP14O95059 124 aaKnown RBP-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 ZNF137PP52743 207 aa-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 PIGPP57054 158 aa-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 FXYD4P59646 89 aa-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 EDDM3AQ14507 147 aa-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 LYRM7Q5U5X0 104 aa-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 C22orf39Q6P5X5 142 aa-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 OR10AC1Q8NH08 325 aa-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 RAB37Q96AX2 223 aa-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 RNF122Q9H9V4 155 aa-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 MED1Q15648 1581 aaPredicted RBP-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 SNAPC4Q5SXM2 1469 aa-0.04□□□□□ -2.42
KDM1A-204ENST00000481879 E9PCH4 1651 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 MUC4Q99102 2169 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 TRBV30A0A0K0K1B3 111 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 SMIM23A6NLE4 172 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 CST8O60676 142 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 NIPSNAP2O75323 286 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 ERC2-IT1O76042 136 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 PPYP01298 95 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 CXCL8P10145 99 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 COX7CP15954 63 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 SPINT3P49223 89 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 HIST1H3AP68431 136 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 H3F3AP84243 136 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 CDK6Q00534 326 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 SPATA45Q537H7 98 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 ATOH7Q8N100 152 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 LINC00467Q9BRT7 94 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 CCDC94Q9BW85 323 aaPredicted RBP-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 SPRR2GQ9BYE4 73 aa-0.05□□□□□ -2.42
KDM1A-204ENST00000481879 SCN3AQ9NY46 2000 aa-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 UNC13CQ8NB66 2214 aa-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 M0R233 179 aa-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 TAX1BP3O14907 124 aa-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 HAND1O96004 215 aa-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 IGLV1-51P01701 117 aa-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 CD14P08571 375 aa-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 ERP29P30040 261 aaKnown RBP-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 ATP5G3P48201 142 aa-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 FOXA3P55318 350 aaPredicted RBP-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 TMEM97Q5BJF2 176 aa-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 PTRHD1Q6GMV3 140 aaKnown RBP-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 SPINK6Q6UWN8 80 aa-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 OTUD6BQ8N6M0 293 aa-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 OR8J2Q8NGG1 315 aa-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 ZNF431Q8TF32 576 aaPredicted RBP-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 CANT1Q8WVQ1 401 aa-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 YPEL2Q96QA6 119 aa-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 SIGMAR1Q99720 223 aa-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 PARVBQ9HBI1 364 aa-0.06□□□□□ -2.42
KDM1A-204ENST00000481879 A0A087WSZ3 146 aa-0.07□□□□□ -2.42
KDM1A-204ENST00000481879 TRAV4A0A0B4J268 109 aa-0.07□□□□□ -2.42
KDM1A-204ENST00000481879 ZNF727A8MUV8 499 aa-0.07□□□□□ -2.42
KDM1A-204ENST00000481879 JMJD7-PLA2G4BH0Y9G9 81 aa-0.07□□□□□ -2.42
KDM1A-204ENST00000481879 EIF3IQ13347 325 aaKnown RBP-0.07□□□□□ -2.42
KDM1A-204ENST00000481879 EIF5AL1Q6IS14 154 aaKnown RBP-0.07□□□□□ -2.42
KDM1A-204ENST00000481879 Q6ZS92 163 aa-0.07□□□□□ -2.42
KDM1A-204ENST00000481879 GNPDA2Q8TDQ7 276 aa-0.07□□□□□ -2.42
KDM1A-204ENST00000481879 PLAC4Q8WY50 150 aa-0.07□□□□□ -2.42
KDM1A-204ENST00000481879 NPCDR1Q9BY65 106 aa-0.07□□□□□ -2.42
KDM1A-204ENST00000481879 PBOV1Q9GZY1 135 aa-0.07□□□□□ -2.42
KDM1A-204ENST00000481879 JPT1Q9UK76 154 aa-0.07□□□□□ -2.42
KDM1A-204ENST00000481879 OR52A1Q9UKL2 312 aa-0.07□□□□□ -2.42
KDM1A-204ENST00000481879 TNS3Q68CZ2 1445 aa-0.07□□□□□ -2.42
KDM1A-204ENST00000481879 MEGF8Q7Z7M0 2845 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms