RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 RAMP3O60896 148 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 TDGF1P13385 188 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 RNASE4P34096 147 aaKnown RBP7.78□□□□□ -1.16
GARNL3-216ENST00000481242 UBE2E1P51965 193 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 SIGLEC15Q6ZMC9 328 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 CSTL1Q9H114 145 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 CD24P25063 80 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 CFPP27918 469 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 ST20Q9HBF5 79 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 ZNF256Q9Y2P7 627 aaPredicted RBP7.78□□□□□ -1.16
GARNL3-216ENST00000481242 TRAV9-2A0A087WT02 112 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 A0A0A6YYD4 124 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 CD7P09564 240 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 EMP1P54849 157 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 HGFACQ04756 655 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 TCF23Q7RTU1 214 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 OR2K2Q8NGT1 345 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 OSTCQ9NRP0 149 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 PTPRQQ9UMZ3 2332 aa7.77□□□□□ -1.16
GARNL3-216ENST00000481242 IGKV1-27A0A075B6S5 117 aa7.77□□□□□ -1.16
GARNL3-216ENST00000481242 H0YIZ8 118 aa7.77□□□□□ -1.16
GARNL3-216ENST00000481242 ZNF585BQ52M93 769 aa7.77□□□□□ -1.16
GARNL3-216ENST00000481242 Q6P435 159 aa7.77□□□□□ -1.16
GARNL3-216ENST00000481242 PSG8Q9UQ74 426 aa7.77□□□□□ -1.16
GARNL3-216ENST00000481242 FNDC10F2Z333 226 aa7.77□□□□□ -1.17
GARNL3-216ENST00000481242 H0YJW9 148 aa7.77□□□□□ -1.17
GARNL3-216ENST00000481242 MDKP21741 143 aaPredicted RBP7.77□□□□□ -1.17
GARNL3-216ENST00000481242 MLNRO43193 412 aa7.77□□□□□ -1.17
GARNL3-216ENST00000481242 SAP30O75446 220 aa7.77□□□□□ -1.17
GARNL3-216ENST00000481242 ZNF414Q96IQ9 312 aa7.77□□□□□ -1.17
GARNL3-216ENST00000481242 F11RQ9Y624 299 aaKnown RBP7.77□□□□□ -1.17
GARNL3-216ENST00000481242 IGKV1D-17A0A075B6S4 117 aa7.77□□□□□ -1.17
GARNL3-216ENST00000481242 GATA2P23769 480 aaPredicted RBP7.77□□□□□ -1.17
GARNL3-216ENST00000481242 NSUN5P1Q3KNT7 163 aa7.77□□□□□ -1.17
GARNL3-216ENST00000481242 C3orf56Q8N813 242 aa7.77□□□□□ -1.17
GARNL3-216ENST00000481242 SIGLEC9Q9Y336 463 aa7.77□□□□□ -1.17
GARNL3-216ENST00000481242 CACNA1AO00555 2505 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 SCO2A0A1W2PP80 73 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 IZUMO1RA6ND01 250 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 E9PQ18 207 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 KLK15Q9H2R5 256 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 LYPD1Q8N2G4 141 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 HIST1H4GQ99525 98 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 IGHV3OR16-8A0A075B7F1 116 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 K7EP13 123 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 HTN3P15516 51 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 EGR1P18146 543 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 COL8A2P25067 703 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 ZFAND6Q6FIF0 208 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 PIP4P2Q8N4L2 257 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 SCGB3A1Q96QR1 104 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 MPDZO75970 2070 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 A0A087WV48 116 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 TRGV4A0A0C4DH28 118 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 LMO1P25800 156 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 CFHR2P36980 270 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 OR5AN1Q8NGI8 311 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 MS4A6AQ9H2W1 248 aa7.76□□□□□ -1.17
GARNL3-216ENST00000481242 GAGE12BA1L429 117 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 CD5LO43866 347 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 LINC01559Q495D7 138 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 COQ2Q96H96 371 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 IGKV1D-8A0A087WSZ0 117 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 IGKV3OR2-268A0A0C4DH90 116 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 SAA4P35542 130 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 ATP5G3P48201 142 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 POU2AF1Q16633 256 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 ZNF562Q6V9R5 426 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 LINC00477Q96M19 166 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 NXT2Q9NPJ8 142 aaKnown RBP7.75□□□□□ -1.17
GARNL3-216ENST00000481242 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.75□□□□□ -1.17
GARNL3-216ENST00000481242 CD55P08174 381 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 TMEM170BQ5T4T1 132 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 TREML4Q6UXN2 200 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 BRD3OSQ6XYD6 125 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 NEUROG1Q92886 237 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 RFNGQ9Y644 331 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 C1QTNF9P0C862 333 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 IFI27P40305 119 aaPredicted RBP7.75□□□□□ -1.17
GARNL3-216ENST00000481242 KIAA1644Q3SXP7 199 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 NMSQ5H8A3 153 aa7.75□□□□□ -1.17
GARNL3-216ENST00000481242 TSC2P49815 1807 aa7.74□□□□□ -1.17
GARNL3-216ENST00000481242 PIEZO1Q92508 2521 aa7.74□□□□□ -1.17
GARNL3-216ENST00000481242 KLRD1Q13241 179 aa7.74□□□□□ -1.17
GARNL3-216ENST00000481242 OR10J3Q5JRS4 329 aa7.74□□□□□ -1.17
GARNL3-216ENST00000481242 TMEM219Q86XT9 240 aa7.74□□□□□ -1.17
GARNL3-216ENST00000481242 DNAL4O96015 105 aa7.74□□□□□ -1.17
GARNL3-216ENST00000481242 PSG1P11464 419 aa7.74□□□□□ -1.17
GARNL3-216ENST00000481242 ORMDL2Q53FV1 153 aa7.74□□□□□ -1.17
GARNL3-216ENST00000481242 PRADC1Q9BSG0 188 aa7.74□□□□□ -1.17
GARNL3-216ENST00000481242 GGTLC1Q9BX51 225 aa7.74□□□□□ -1.17
GARNL3-216ENST00000481242 ATRXP46100 2492 aa7.74□□□□□ -1.17
GARNL3-216ENST00000481242 TRAV1-1A0A0B4J248 108 aa7.74□□□□□ -1.17
GARNL3-216ENST00000481242 C7orf71A4D174 169 aa7.74□□□□□ -1.17
GARNL3-216ENST00000481242 TMEM50AO95807 157 aa7.74□□□□□ -1.17
GARNL3-216ENST00000481242 TFF1P04155 84 aa7.74□□□□□ -1.17
GARNL3-216ENST00000481242 TMEM14EPQ6UXP3 125 aa7.74□□□□□ -1.17
GARNL3-216ENST00000481242 IGHV1-69DA0A0B4J2H0 117 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 GRIFINA4D1Z8 144 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 HIGD1CA8MV81 97 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms