RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 HIST1H2BBP33778 126 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 SAA4P35542 130 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 HIST1H2BDP58876 126 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 RPL15P61313 204 aaKnown RBP11.56□□□□□ -0.56
NPHP4-208ENST00000478423 HIST1H2BCP62807 126 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 HIST2H2BEQ16778 126 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-208ENST00000478423 COL5A1-AS1Q5SY13 56 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 LINC01551Q86U37 167 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 HIST1H2BHQ93079 126 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 HIST1H2BNQ99877 126 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 HIST1H2BMQ99879 126 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 IGKV1-39P01597 117 aa11.55□□□□□ -0.56
NPHP4-208ENST00000478423 IGKV1D-39P04432 117 aa11.55□□□□□ -0.56
NPHP4-208ENST00000478423 SLC25A34Q6PIV7 304 aa11.55□□□□□ -0.56
NPHP4-208ENST00000478423 TMEM70Q9BUB7 260 aa11.55□□□□□ -0.56
NPHP4-208ENST00000478423 RPLP1P05386 114 aaKnown RBP11.55□□□□□ -0.56
NPHP4-208ENST00000478423 LYRM7Q5U5X0 104 aa11.55□□□□□ -0.56
NPHP4-208ENST00000478423 ASCL2Q99929 193 aa11.55□□□□□ -0.56
NPHP4-208ENST00000478423 A0A1W2PPI3 338 aa11.55□□□□□ -0.56
NPHP4-208ENST00000478423 SERF1AO75920 110 aa11.55□□□□□ -0.56
NPHP4-208ENST00000478423 LOXP28300 417 aaPredicted RBP11.55□□□□□ -0.56
NPHP4-208ENST00000478423 IGFL2Q6UWQ7 119 aa11.55□□□□□ -0.56
NPHP4-208ENST00000478423 COLCA2A8K830 154 aa11.54□□□□□ -0.56
NPHP4-208ENST00000478423 VDAC2P45880 294 aaPredicted RBP11.54□□□□□ -0.56
NPHP4-208ENST00000478423 FAM71F2Q6NXP2 309 aa11.54□□□□□ -0.56
NPHP4-208ENST00000478423 TMEM170AQ8WVE7 144 aa11.54□□□□□ -0.56
NPHP4-208ENST00000478423 SPRY4Q9C004 299 aa11.54□□□□□ -0.56
NPHP4-208ENST00000478423 TRBV24-1A0A075B6N3 115 aa11.54□□□□□ -0.56
NPHP4-208ENST00000478423 A0A1B0GW64 132 aa11.54□□□□□ -0.56
NPHP4-208ENST00000478423 ORMDL3Q8N138 153 aa11.54□□□□□ -0.56
NPHP4-208ENST00000478423 DNAH12Q6ZR08 3092 aa11.54□□□□□ -0.56
NPHP4-208ENST00000478423 C7orf71A4D174 169 aa11.54□□□□□ -0.56
NPHP4-208ENST00000478423 MMP23AO75900 390 aa11.54□□□□□ -0.56
NPHP4-208ENST00000478423 PPIFP30405 207 aaKnown RBP11.54□□□□□ -0.56
NPHP4-208ENST00000478423 RNASE4P34096 147 aaKnown RBP11.54□□□□□ -0.56
NPHP4-208ENST00000478423 PAX9P55771 341 aa11.54□□□□□ -0.56
NPHP4-208ENST00000478423 C17orf58Q2M2W7 97 aa11.54□□□□□ -0.56
NPHP4-208ENST00000478423 PCNX3Q9H6A9 2034 aa11.54□□□□□ -0.56
NPHP4-208ENST00000478423 C5orf52A6NGY3 159 aa11.54□□□□□ -0.56
NPHP4-208ENST00000478423 NPIPB5A8MRT5 1133 aa11.54□□□□□ -0.56
NPHP4-208ENST00000478423 RPL24P83731 157 aaKnown RBP11.54□□□□□ -0.56
NPHP4-208ENST00000478423 CXCL1P09341 107 aa11.53□□□□□ -0.56
NPHP4-208ENST00000478423 SRD5A1P18405 259 aa11.53□□□□□ -0.56
NPHP4-208ENST00000478423 SMAGPQ0VAQ4 97 aa11.53□□□□□ -0.56
NPHP4-208ENST00000478423 SELENOKQ9Y6D0 94 aa11.53□□□□□ -0.56
NPHP4-208ENST00000478423 FBLN7Q53RD9 439 aa11.53□□□□□ -0.56
NPHP4-208ENST00000478423 TMEM242Q9NWH2 141 aa11.53□□□□□ -0.56
NPHP4-208ENST00000478423 DKK4Q9UBT3 224 aa11.53□□□□□ -0.56
NPHP4-208ENST00000478423 DMRT1Q9Y5R6 373 aa11.53□□□□□ -0.56
NPHP4-208ENST00000478423 HIVEP3Q5T1R4 2406 aa11.53□□□□□ -0.56
NPHP4-208ENST00000478423 LBHQ53QV2 105 aaPredicted RBP11.53□□□□□ -0.56
NPHP4-208ENST00000478423 Q8NFD4 153 aa11.53□□□□□ -0.56
NPHP4-208ENST00000478423 HIVEP2P31629 2446 aa11.53□□□□□ -0.56
NPHP4-208ENST00000478423 A0A1B0GW15 77 aa11.52□□□□□ -0.56
NPHP4-208ENST00000478423 ZNF414Q96IQ9 312 aa11.52□□□□□ -0.56
NPHP4-208ENST00000478423 NCOR1P1Q9H4R4 102 aa11.52□□□□□ -0.56
NPHP4-208ENST00000478423 C15orf65H3BRN8 121 aa11.52□□□□□ -0.56
NPHP4-208ENST00000478423 CD33P20138 364 aa11.52□□□□□ -0.56
NPHP4-208ENST00000478423 UQCRFS1P47985 274 aa11.52□□□□□ -0.56
NPHP4-208ENST00000478423 SPSB3Q6PJ21 355 aa11.52□□□□□ -0.56
NPHP4-208ENST00000478423 C12orf54Q6X4T0 127 aa11.52□□□□□ -0.56
NPHP4-208ENST00000478423 ZNF329Q86UD4 541 aa11.52□□□□□ -0.56
NPHP4-208ENST00000478423 SLX1AQ9BQ83 275 aa11.52□□□□□ -0.56
NPHP4-208ENST00000478423 TMEM14BQ9NUH8 114 aa11.52□□□□□ -0.56
NPHP4-208ENST00000478423 TNCP24821 2201 aa11.52□□□□□ -0.57
NPHP4-208ENST00000478423 OBSL1O75147 1896 aa11.52□□□□□ -0.57
NPHP4-208ENST00000478423 DYSFO75923 2080 aa11.52□□□□□ -0.57
NPHP4-208ENST00000478423 ADMP35318 185 aa11.52□□□□□ -0.57
NPHP4-208ENST00000478423 ZNF134P52741 427 aa11.52□□□□□ -0.57
NPHP4-208ENST00000478423 SAMD13Q5VXD3 122 aa11.52□□□□□ -0.57
NPHP4-208ENST00000478423 COL4A3Q01955 1670 aa11.52□□□□□ -0.57
NPHP4-208ENST00000478423 NUDT10Q8NFP7 164 aa11.52□□□□□ -0.57
NPHP4-208ENST00000478423 NUDT11Q96G61 164 aa11.52□□□□□ -0.57
NPHP4-208ENST00000478423 ADAMTS9Q9P2N4 1935 aa11.52□□□□□ -0.57
NPHP4-208ENST00000478423 PRSS2P07478 247 aa11.51□□□□□ -0.57
NPHP4-208ENST00000478423 MST1LQ2TV78 715 aa11.51□□□□□ -0.57
NPHP4-208ENST00000478423 BEND2Q8NDZ0 799 aa11.51□□□□□ -0.57
NPHP4-208ENST00000478423 OR5AN1Q8NGI8 311 aa11.51□□□□□ -0.57
NPHP4-208ENST00000478423 DUX3Q96PT4 197 aa11.51□□□□□ -0.57
NPHP4-208ENST00000478423 PRO3102Q9H379 93 aa11.51□□□□□ -0.57
NPHP4-208ENST00000478423 PEMTQ9UBM1 199 aa11.51□□□□□ -0.57
NPHP4-208ENST00000478423 LOC105371267A0A1B0GV96 52 aa11.51□□□□□ -0.57
NPHP4-208ENST00000478423 C9JQL5 133 aa11.51□□□□□ -0.57
NPHP4-208ENST00000478423 TCRAP04437 139 aa11.51□□□□□ -0.57
NPHP4-208ENST00000478423 LDLRAD2Q5SZI1 272 aa11.51□□□□□ -0.57
NPHP4-208ENST00000478423 TSKUQ8WUA8 353 aa11.51□□□□□ -0.57
NPHP4-208ENST00000478423 ANKRD11Q6UB99 2663 aaPredicted RBP11.51□□□□□ -0.57
NPHP4-208ENST00000478423 TRAV8-1A0A0A6YYK1 113 aa11.51□□□□□ -0.57
NPHP4-208ENST00000478423 FAM181BA6NEQ2 426 aa11.51□□□□□ -0.57
NPHP4-208ENST00000478423 GCSHP23434 173 aa11.51□□□□□ -0.57
NPHP4-208ENST00000478423 C19orf54Q5BKX5 351 aa11.51□□□□□ -0.57
NPHP4-208ENST00000478423 CD7P09564 240 aa11.5□□□□□ -0.57
NPHP4-208ENST00000478423 TEX36Q5VZQ5 186 aa11.5□□□□□ -0.57
NPHP4-208ENST00000478423 FGF23Q9GZV9 251 aaPredicted RBP11.5□□□□□ -0.57
NPHP4-208ENST00000478423 IGKV2-40A0A087WW87 121 aaPredicted RBP11.5□□□□□ -0.57
NPHP4-208ENST00000478423 UBE2L6O14933 153 aa11.5□□□□□ -0.57
NPHP4-208ENST00000478423 IGKV2D-40P01614 121 aaPredicted RBP11.5□□□□□ -0.57
NPHP4-208ENST00000478423 ZNF562Q6V9R5 426 aa11.5□□□□□ -0.57
NPHP4-208ENST00000478423 ADCYAP1P18509 176 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms