RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 PLA2G10O15496 165 aa8.08□□□□□ -1.12
PTPRN-213ENST00000476930 CCNKO75909 580 aa8.08□□□□□ -1.12
PTPRN-213ENST00000476930 FABP1P07148 127 aa8.08□□□□□ -1.12
PTPRN-213ENST00000476930 NUP62P37198 522 aaPredicted RBP8.08□□□□□ -1.12
PTPRN-213ENST00000476930 NKX2-1P43699 371 aaPredicted RBP8.08□□□□□ -1.12
PTPRN-213ENST00000476930 C4orf46Q504U0 113 aa8.08□□□□□ -1.12
PTPRN-213ENST00000476930 TMEM41BQ5BJD5 291 aa8.08□□□□□ -1.12
PTPRN-213ENST00000476930 ACOT7LQ6ZUV0 252 aa8.08□□□□□ -1.12
PTPRN-213ENST00000476930 OR4D5Q8NGN0 318 aa8.08□□□□□ -1.12
PTPRN-213ENST00000476930 COQ8AQ8NI60 647 aa8.08□□□□□ -1.12
PTPRN-213ENST00000476930 PPP1R14BQ96C90 147 aa8.08□□□□□ -1.12
PTPRN-213ENST00000476930 LINC00052Q96N35 136 aa8.08□□□□□ -1.12
PTPRN-213ENST00000476930 XCL2Q9UBD3 114 aa8.08□□□□□ -1.12
PTPRN-213ENST00000476930 PFDN2Q9UHV9 154 aa8.08□□□□□ -1.12
PTPRN-213ENST00000476930 STRAPQ9Y3F4 350 aaKnown RBP8.08□□□□□ -1.12
PTPRN-213ENST00000476930 DNAH17Q9UFH2 4485 aa8.08□□□□□ -1.12
PTPRN-213ENST00000476930 FAT2Q9NYQ8 4349 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 PMS2P5A8MQ11 134 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 CENPXA8MT69 81 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 SSSCA1O60232 199 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 IFNA21P01568 189 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 IGKV3-20P01619 116 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 HLA-DRB4P13762 266 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 MIFP14174 115 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 PAX9P55771 341 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 FXYD7P58549 80 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 AKR1C1Q04828 323 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 LINC01559Q495D7 138 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 C1orf194Q5T5A4 169 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 OR8I2Q8N0Y5 310 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 C17orf77Q96MU5 243 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 C7orf50Q9BRJ6 194 aaKnown RBP8.07□□□□□ -1.12
PTPRN-213ENST00000476930 MFFQ9GZY8 342 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 SLC25A32Q9H2D1 315 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 PSENENQ9NZ42 101 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 TBC1D24Q9ULP9 559 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 HLA-DRB4X5D2U9 266 aa8.07□□□□□ -1.12
PTPRN-213ENST00000476930 ZNF98A6NK75 572 aa8.06□□□□□ -1.12
PTPRN-213ENST00000476930 F6UB75 175 aa8.06□□□□□ -1.12
PTPRN-213ENST00000476930 SCGB1D2O95969 90 aa8.06□□□□□ -1.12
PTPRN-213ENST00000476930 ORM2P19652 201 aa8.06□□□□□ -1.12
PTPRN-213ENST00000476930 ID1P41134 155 aa8.06□□□□□ -1.12
PTPRN-213ENST00000476930 TMEM144Q7Z5S9 345 aa8.06□□□□□ -1.12
PTPRN-213ENST00000476930 BPIFCQ8NFQ6 507 aa8.06□□□□□ -1.12
PTPRN-213ENST00000476930 SMIM8Q96KF7 97 aa8.06□□□□□ -1.12
PTPRN-213ENST00000476930 C20orf173Q96LM9 149 aa8.06□□□□□ -1.12
PTPRN-213ENST00000476930 SAV1Q9H4B6 383 aaPredicted RBP8.06□□□□□ -1.12
PTPRN-213ENST00000476930 SLC25A22Q9H936 323 aa8.06□□□□□ -1.12
PTPRN-213ENST00000476930 HECTD4Q9Y4D8 3996 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 SMCO3A2RU48 225 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 LYRM1O43325 122 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 CFDP00746 253 aaPredicted RBP8.05□□□□□ -1.12
PTPRN-213ENST00000476930 METTL15P1P0C7V9 234 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 HLA-DMBP28068 263 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 PSMB3P49720 205 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 NUTF2P61970 127 aaKnown RBP8.05□□□□□ -1.12
PTPRN-213ENST00000476930 RRAS2P62070 204 aaPredicted RBP8.05□□□□□ -1.12
PTPRN-213ENST00000476930 IAH1Q2TAA2 248 aaPredicted RBP8.05□□□□□ -1.12
PTPRN-213ENST00000476930 TMEM14EPQ6UXP3 125 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 FOXI2Q6ZQN5 318 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 RPP25LQ8N5L8 163 aaKnown RBP8.05□□□□□ -1.12
PTPRN-213ENST00000476930 ZBTB8BQ8NAP8 495 aaPredicted RBP8.05□□□□□ -1.12
PTPRN-213ENST00000476930 OR1B1Q8NGR6 318 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 C2CD4CQ8TF44 421 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 MITD1Q8WV92 249 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 RSG1Q9BU20 258 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 C20orf85Q9H1P6 137 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 HRH4Q9H3N8 390 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 NDUFA13Q9P0J0 144 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 GSKIPQ9P0R6 139 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 DOK5Q9P104 306 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 CELA1Q9UNI1 258 aa8.05□□□□□ -1.12
PTPRN-213ENST00000476930 TRAV6A0A075B6T7 132 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 ISLRO14498 428 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 CCSO14618 274 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 DEDDO75618 318 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 IGFL4Q6B9Z1 124 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 LGALS9CQ6DKI2 356 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 CYP2G1PQ6ZSU1 146 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 Q6ZTC4 211 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 ZNF767PQ75MW2 155 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 ZNF709Q8N972 641 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 OR4B1Q8NGF8 309 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 C16orf92Q96LL3 132 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 SCRT1Q9BWW7 348 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 C1QTNF4Q9BXJ3 329 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 SLC35B3Q9H1N7 401 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 SLC45A2Q9UMX9 530 aa8.04□□□□□ -1.12
PTPRN-213ENST00000476930 RCL1Q9Y2P8 373 aaKnown RBP8.04□□□□□ -1.12
PTPRN-213ENST00000476930 IGLL5B9A064 214 aa8.03□□□□□ -1.12
PTPRN-213ENST00000476930 MBPP02686 304 aaPredicted RBP8.03□□□□□ -1.12
PTPRN-213ENST00000476930 TCRBP04435 133 aa8.03□□□□□ -1.12
PTPRN-213ENST00000476930 IL5P05113 134 aa8.03□□□□□ -1.12
PTPRN-213ENST00000476930 GALR1P47211 349 aa8.03□□□□□ -1.12
PTPRN-213ENST00000476930 ARL16Q0P5N6 197 aa8.03□□□□□ -1.12
PTPRN-213ENST00000476930 CNPY1Q3B7I2 92 aa8.03□□□□□ -1.12
PTPRN-213ENST00000476930 FAM78BQ5VT40 261 aa8.03□□□□□ -1.12
PTPRN-213ENST00000476930 ZNF705AQ6ZN79 300 aaPredicted RBP8.03□□□□□ -1.12
PTPRN-213ENST00000476930 SEC22CQ9BRL7 303 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms