RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 OBSL1O75147 1896 aa2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 DPM2O94777 84 aa2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 SOGA1O94964 1423 aa2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 OR2H2O95918 312 aa2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 IGLV6-57P01721 117 aa2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 HINT1P49773 126 aaPredicted RBP2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 TMEM258P61165 79 aa2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 NNATQ16517 81 aa2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 Q5XG85 94 aa2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 EIF5AL1Q6IS14 154 aaKnown RBP2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 LCN15Q6UWW0 184 aa2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 TCTE3Q8IZS6 198 aa2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 Q9BRP9 147 aa2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 LXNQ9BS40 222 aa2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 BAIAP2Q9UQB8 552 aa2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 HS3ST2Q9Y278 367 aa2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 MYH11P35749 1972 aa2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 CCDC88AQ3V6T2 1871 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 ARID1AO14497 2285 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 SMARCA2P51531 1590 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 THOC2Q8NI27 1593 aaKnown RBP2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 TAF1LQ8IZX4 1826 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 IGLV3-9A0A075B6K5 115 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 IGHV1-58A0A0C4DH39 117 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 A0A1B0GW64 132 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 HMSDA8MTL9 139 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 C1QCP02747 245 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 METTL15P1P0C7V9 234 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 TRGC1P0CF51 173 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 NDUFA6P56556 154 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 Q6ZQT0 140 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 AAED1Q7RTV5 226 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 WFDC11Q8NEX6 87 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 NHP2Q9NX24 153 aaKnown RBP2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 PAIP2BQ9ULR5 123 aaKnown RBP2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 GREB1Q4ZG55 1949 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 NISCHQ9Y2I1 1504 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 MYO16Q9Y6X6 1858 aa2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 TCOF1Q13428 1488 aaKnown RBP2.71□□□□□ -1.98
SRGAP3-205ENST00000475560 DOCK4Q8N1I0 1966 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 FRMPD1Q5SYB0 1578 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 RB1CC1Q8TDY2 1594 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 NUP98P52948 1817 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 TMSB15BA0A087X1C1 80 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 LY6LH3BQJ8 138 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 TIMM17BO60830 172 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 IFNA4P05014 189 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 CTSDP07339 412 aaPredicted RBP2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 MPC1LP0DKB6 136 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 AQP4P55087 323 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 ERHP84090 104 aaKnown RBP2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 ZNF791Q3KP31 576 aaPredicted RBP2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 PATE2Q6UY27 113 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 C4orf22Q6V702 233 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 LINC00305Q7Z4B0 112 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 OR51A4Q8NGJ6 313 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 RNASE11Q8TAA1 199 aaKnown RBP2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 ZNF714Q96N38 554 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 BCL2L10Q9HD36 194 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 NDUFB11Q9NX14 153 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 CCL26Q9Y258 94 aa2.7□□□□□ -1.98
SRGAP3-205ENST00000475560 PLXNB1O43157 2135 aa2.69□□□□□ -1.98
SRGAP3-205ENST00000475560 UNC79Q9P2D8 2635 aa2.69□□□□□ -1.98
SRGAP3-205ENST00000475560 IGKV1D-42A0A075B6H8 117 aa2.69□□□□□ -1.98
SRGAP3-205ENST00000475560 IGKV2-24A0A0C4DH68 120 aa2.69□□□□□ -1.98
SRGAP3-205ENST00000475560 TEX29Q8N6K0 151 aa2.69□□□□□ -1.98
SRGAP3-205ENST00000475560 OR5D16Q8NGK9 328 aa2.69□□□□□ -1.98
SRGAP3-205ENST00000475560 TVP23CQ96ET8 276 aa2.69□□□□□ -1.98
SRGAP3-205ENST00000475560 LINC00467Q9BRT7 94 aa2.69□□□□□ -1.98
SRGAP3-205ENST00000475560 CBLN4Q9NTU7 201 aa2.69□□□□□ -1.98
SRGAP3-205ENST00000475560 PRO2289Q9P1D8 64 aa2.69□□□□□ -1.98
SRGAP3-205ENST00000475560 STRCQ7RTU9 1775 aa2.69□□□□□ -1.98
SRGAP3-205ENST00000475560 PRR14LQ5THK1 2151 aa2.68□□□□□ -1.98
SRGAP3-205ENST00000475560 EEA1Q15075 1411 aa2.68□□□□□ -1.98
SRGAP3-205ENST00000475560 SMARCA4P51532 1647 aa2.68□□□□□ -1.98
SRGAP3-205ENST00000475560 ZSWIM8A7E2V4 1837 aa2.68□□□□□ -1.98
SRGAP3-205ENST00000475560 PEBP1P30086 187 aaKnown RBP2.68□□□□□ -1.98
SRGAP3-205ENST00000475560 SS18Q15532 418 aa2.68□□□□□ -1.98
SRGAP3-205ENST00000475560 TAF9Q16594 264 aa2.68□□□□□ -1.98
SRGAP3-205ENST00000475560 ZNF826PQ6ZT77 177 aa2.68□□□□□ -1.98
SRGAP3-205ENST00000475560 VPS25Q9BRG1 176 aa2.68□□□□□ -1.98
SRGAP3-205ENST00000475560 RTL9Q8NET4 1388 aa2.68□□□□□ -1.98
SRGAP3-205ENST00000475560 CPAMD8Q8IZJ3 1885 aa2.68□□□□□ -1.98
SRGAP3-205ENST00000475560 SCN9AQ15858 1988 aa2.68□□□□□ -1.98
SRGAP3-205ENST00000475560 TRAV13-1A0A0B4J241 112 aa2.67□□□□□ -1.98
SRGAP3-205ENST00000475560 A8MWV9 139 aa2.67□□□□□ -1.98
SRGAP3-205ENST00000475560 C5orf58C9J3I9 102 aa2.67□□□□□ -1.98
SRGAP3-205ENST00000475560 FNDC10F2Z333 226 aa2.67□□□□□ -1.98
SRGAP3-205ENST00000475560 RER1O15258 196 aa2.67□□□□□ -1.98
SRGAP3-205ENST00000475560 PMP2P02689 132 aa2.67□□□□□ -1.98
SRGAP3-205ENST00000475560 KRTAP10-3P60369 221 aa2.67□□□□□ -1.98
SRGAP3-205ENST00000475560 ZNF345Q14585 488 aa2.67□□□□□ -1.98
SRGAP3-205ENST00000475560 ESRGQ1W209 222 aa2.67□□□□□ -1.98
SRGAP3-205ENST00000475560 C7orf65Q6ZTY9 151 aa2.67□□□□□ -1.98
SRGAP3-205ENST00000475560 OR4X2Q8NGF9 303 aa2.67□□□□□ -1.98
SRGAP3-205ENST00000475560 BRK1Q8WUW1 75 aa2.67□□□□□ -1.98
SRGAP3-205ENST00000475560 C20orf166-AS1Q96NR2 134 aa2.67□□□□□ -1.98
SRGAP3-205ENST00000475560 TAF9BQ9HBM6 251 aa2.67□□□□□ -1.98
SRGAP3-205ENST00000475560 TAS2R4Q9NYW5 299 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms