RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 HIST1H2BMQ99879 126 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 CDC42EP3Q9UKI2 254 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 IGHV3-23P01764 117 aa12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 SLC25A5P05141 298 aaKnown RBP12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 PAX1P15863 534 aa12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 HIST1H1BP16401 226 aaKnown RBP12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 GFI1BQ5VTD9 330 aa12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 FAM110DQ8TAY7 271 aaPredicted RBP12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 FRZBQ92765 325 aa12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 LINC00479Q96M42 142 aa12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 SPG11Q96JI7 2443 aa12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 TRAV20A0A0B4J274 112 aa12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 SH2D7A6NKC9 451 aaPredicted RBP12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 B4DSR2 109 aa12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 IGHV4-38-2P0DP08 117 aa12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 CDX1P47902 265 aaPredicted RBP12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 TMEM219Q86XT9 240 aa12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 C5orf56Q8N8D9 126 aa12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 BTF3L4Q96K17 158 aa12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 IGF2BP2-AS1Q96M15 143 aa12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 TMEM14CQ9P0S9 112 aa12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 EPDR1Q9UM22 224 aa12.06□□□□□ -0.48
RPUSD3-215ENST00000475470 F8W735 103 aaPredicted RBP12.05□□□□□ -0.48
RPUSD3-215ENST00000475470 H3BTX0 84 aa12.05□□□□□ -0.48
RPUSD3-215ENST00000475470 SCGB2A1O75556 95 aa12.05□□□□□ -0.48
RPUSD3-215ENST00000475470 TRGC1P0CF51 173 aa12.05□□□□□ -0.48
RPUSD3-215ENST00000475470 MGST1P10620 155 aaKnown RBP12.05□□□□□ -0.48
RPUSD3-215ENST00000475470 SHANK2-AS3Q9BTD1 123 aa12.05□□□□□ -0.48
RPUSD3-215ENST00000475470 SVEP1Q4LDE5 3571 aa12.05□□□□□ -0.48
RPUSD3-215ENST00000475470 WI2-2373I1.2A0A1W2PRP0 233 aa12.05□□□□□ -0.48
RPUSD3-215ENST00000475470 ZNF320A2RRD8 509 aa12.05□□□□□ -0.48
RPUSD3-215ENST00000475470 SLC17A3O00476 420 aa12.05□□□□□ -0.48
RPUSD3-215ENST00000475470 GCGP01275 180 aa12.05□□□□□ -0.48
RPUSD3-215ENST00000475470 GNG5P63218 68 aa12.05□□□□□ -0.48
RPUSD3-215ENST00000475470 TMEM68Q96MH6 324 aa12.05□□□□□ -0.48
RPUSD3-215ENST00000475470 MEGF9Q9H1U4 602 aa12.05□□□□□ -0.48
RPUSD3-215ENST00000475470 HIF1ANQ9NWT6 349 aa12.05□□□□□ -0.48
RPUSD3-215ENST00000475470 MOB4Q9Y3A3 225 aa12.05□□□□□ -0.48
RPUSD3-215ENST00000475470 OR2T8A6NH00 312 aa12.04□□□□□ -0.48
RPUSD3-215ENST00000475470 H3BRN7 92 aa12.04□□□□□ -0.48
RPUSD3-215ENST00000475470 IGLV2-8P01709 118 aa12.04□□□□□ -0.48
RPUSD3-215ENST00000475470 TYMSP04818 313 aa12.04□□□□□ -0.48
RPUSD3-215ENST00000475470 HIST1H1EP10412 219 aaKnown RBP12.04□□□□□ -0.48
RPUSD3-215ENST00000475470 SLC25A16P16260 332 aa12.04□□□□□ -0.48
RPUSD3-215ENST00000475470 CDPF1Q6NVV7 123 aa12.04□□□□□ -0.48
RPUSD3-215ENST00000475470 S100A7AQ86SG5 101 aa12.04□□□□□ -0.48
RPUSD3-215ENST00000475470 Q9H3A6 140 aa12.04□□□□□ -0.48
RPUSD3-215ENST00000475470 IL36BQ9NZH7 164 aa12.04□□□□□ -0.48
RPUSD3-215ENST00000475470 TRAV34A0A0B4J273 112 aa12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 LINC01548A6NM66 108 aa12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 S100A2P29034 98 aa12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 FCGR2BP31994 310 aaPredicted RBP12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 BPIFA4PQ86YQ2 179 aa12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 TXN2Q99757 166 aa12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 RPH3ALQ9UNE2 315 aa12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 CSMD1Q96PZ7 3565 aa12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 UTP20O75691 2785 aaKnown RBP12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 G3V318 75 aa12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 PHOX2AO14813 284 aa12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 PYY3Q5JQD4 70 aa12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 NHLRC2Q8NBF2 726 aa12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 PIFOQ8TCI5 191 aa12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 VN1R17PQ8TDU5 208 aa12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 RNASE7Q9H1E1 156 aaKnown RBP12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 ZNF586Q9NXT0 402 aa12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 GAR1Q9NY12 217 aaKnown RBP12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 VPS13CQ709C8 3753 aa12.03□□□□□ -0.48
RPUSD3-215ENST00000475470 ISLRO14498 428 aa12.02□□□□□ -0.48
RPUSD3-215ENST00000475470 UBE2G1P62253 170 aa12.02□□□□□ -0.48
RPUSD3-215ENST00000475470 USF2Q15853 346 aaPredicted RBP12.02□□□□□ -0.48
RPUSD3-215ENST00000475470 C15orf32Q32M92 178 aa12.02□□□□□ -0.48
RPUSD3-215ENST00000475470 BAGE2Q86Y30 109 aa12.02□□□□□ -0.48
RPUSD3-215ENST00000475470 C5orf17Q8NAS9 161 aa12.02□□□□□ -0.48
RPUSD3-215ENST00000475470 OR4F17Q8NGA8 305 aa12.02□□□□□ -0.48
RPUSD3-215ENST00000475470 GPR61Q9BZJ8 451 aa12.02□□□□□ -0.48
RPUSD3-215ENST00000475470 V9GYV3 84 aa12.02□□□□□ -0.48
RPUSD3-215ENST00000475470 RHOGP84095 191 aa12.02□□□□□ -0.49
RPUSD3-215ENST00000475470 TMEM183BQ1AE95 376 aa12.02□□□□□ -0.49
RPUSD3-215ENST00000475470 RPEL1Q2QD12 228 aa12.02□□□□□ -0.49
RPUSD3-215ENST00000475470 OR10D4PQ8NGN7 298 aa12.02□□□□□ -0.49
RPUSD3-215ENST00000475470 ATG101Q9BSB4 218 aa12.02□□□□□ -0.49
RPUSD3-215ENST00000475470 OSTCQ9NRP0 149 aa12.02□□□□□ -0.49
RPUSD3-215ENST00000475470 RNF24Q9Y225 148 aa12.02□□□□□ -0.49
RPUSD3-215ENST00000475470 CTSGP08311 255 aa12.01□□□□□ -0.49
RPUSD3-215ENST00000475470 FAM209BQ5JX69 171 aa12.01□□□□□ -0.49
RPUSD3-215ENST00000475470 IBA57Q5T440 356 aaKnown RBP12.01□□□□□ -0.49
RPUSD3-215ENST00000475470 OTORQ9NRC9 128 aa12.01□□□□□ -0.49
RPUSD3-215ENST00000475470 GATA3P23771 443 aa12.01□□□□□ -0.49
RPUSD3-215ENST00000475470 SOX21Q9Y651 276 aaPredicted RBP12.01□□□□□ -0.49
RPUSD3-215ENST00000475470 CRYBG3Q68DQ2 2970 aa12.01□□□□□ -0.49
RPUSD3-215ENST00000475470 KLK9Q2XQG4 91 aa12□□□□□ -0.49
RPUSD3-215ENST00000475470 BCL6BQ8N143 479 aaPredicted RBP12□□□□□ -0.49
RPUSD3-215ENST00000475470 HIST3H2BBQ8N257 126 aa12□□□□□ -0.49
RPUSD3-215ENST00000475470 SERTAD4Q9NUC0 356 aa12□□□□□ -0.49
RPUSD3-215ENST00000475470 KLK9Q9UKQ9 250 aa12□□□□□ -0.49
RPUSD3-215ENST00000475470 UBR5O95071 2799 aaPredicted RBP12□□□□□ -0.49
RPUSD3-215ENST00000475470 TRAV9-1A0A075B6T8 112 aa12□□□□□ -0.49
RPUSD3-215ENST00000475470 TRBV9A0A0B4J1U6 114 aa12□□□□□ -0.49
RPUSD3-215ENST00000475470 TCRAP04437 139 aa12□□□□□ -0.49
RPUSD3-215ENST00000475470 ACTL10Q5JWF8 245 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms