RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 SSSCA1O60232 199 aa6.88□□□□□ -1.31
PDPN-204ENST00000475043 SCGB1D2O95969 90 aa6.88□□□□□ -1.31
PDPN-204ENST00000475043 ATF4P18848 351 aaPredicted RBP6.88□□□□□ -1.31
PDPN-204ENST00000475043 BTCP35070 178 aa6.88□□□□□ -1.31
PDPN-204ENST00000475043 NKX2-1P43699 371 aaPredicted RBP6.88□□□□□ -1.31
PDPN-204ENST00000475043 POLR2GP62487 172 aaKnown RBP eCLIP6.88□□□□□ -1.31
PDPN-204ENST00000475043 AKR1C1Q04828 323 aa6.88□□□□□ -1.31
PDPN-204ENST00000475043 TMEM41BQ5BJD5 291 aa6.88□□□□□ -1.31
PDPN-204ENST00000475043 MORN3Q6PF18 240 aaPredicted RBP6.88□□□□□ -1.31
PDPN-204ENST00000475043 CEMP1Q6PRD7 247 aaPredicted RBP6.88□□□□□ -1.31
PDPN-204ENST00000475043 C11orf45Q8TAV5 145 aa6.88□□□□□ -1.31
PDPN-204ENST00000475043 TRGV9Q99603 122 aa6.88□□□□□ -1.31
PDPN-204ENST00000475043 CLEC5AQ9NY25 188 aa6.88□□□□□ -1.31
PDPN-204ENST00000475043 PSENENQ9NZ42 101 aa6.88□□□□□ -1.31
PDPN-204ENST00000475043 FBXL17Q9UF56 701 aa6.88□□□□□ -1.31
PDPN-204ENST00000475043 KLK5Q9Y337 293 aaPredicted RBP6.88□□□□□ -1.31
PDPN-204ENST00000475043 AGRNO00468 2067 aa6.88□□□□□ -1.31
PDPN-204ENST00000475043 SMCO3A2RU48 225 aa6.87□□□□□ -1.31
PDPN-204ENST00000475043 PRSS46E5RG02 174 aa6.87□□□□□ -1.31
PDPN-204ENST00000475043 LYRM1O43325 122 aa6.87□□□□□ -1.31
PDPN-204ENST00000475043 LY6G6CO95867 125 aa6.87□□□□□ -1.31
PDPN-204ENST00000475043 C4BPBP20851 252 aa6.87□□□□□ -1.31
PDPN-204ENST00000475043 NANOS2P60321 138 aaKnown RBP6.87□□□□□ -1.31
PDPN-204ENST00000475043 NUTF2P61970 127 aaKnown RBP6.87□□□□□ -1.31
PDPN-204ENST00000475043 ID3Q02535 119 aa6.87□□□□□ -1.31
PDPN-204ENST00000475043 ACOT7LQ6ZUV0 252 aa6.87□□□□□ -1.31
PDPN-204ENST00000475043 OR8I2Q8N0Y5 310 aa6.87□□□□□ -1.31
PDPN-204ENST00000475043 THAP8Q8NA92 274 aa6.87□□□□□ -1.31
PDPN-204ENST00000475043 PHLDA1Q8WV24 401 aaPredicted RBP6.87□□□□□ -1.31
PDPN-204ENST00000475043 LINC00052Q96N35 136 aa6.87□□□□□ -1.31
PDPN-204ENST00000475043 C11orf68Q9H3H3 251 aaKnown RBP6.87□□□□□ -1.31
PDPN-204ENST00000475043 SLC25A22Q9H936 323 aa6.87□□□□□ -1.31
PDPN-204ENST00000475043 GSKIPQ9P0R6 139 aa6.87□□□□□ -1.31
PDPN-204ENST00000475043 STARD9Q9P2P6 4700 aa6.86□□□□□ -1.31
PDPN-204ENST00000475043 CFDP00746 253 aaPredicted RBP6.86□□□□□ -1.31
PDPN-204ENST00000475043 GIG44P09565 113 aaPredicted RBP6.86□□□□□ -1.31
PDPN-204ENST00000475043 ORM2P19652 201 aa6.86□□□□□ -1.31
PDPN-204ENST00000475043 GATA2P23769 480 aaPredicted RBP6.86□□□□□ -1.31
PDPN-204ENST00000475043 ID1P41134 155 aa6.86□□□□□ -1.31
PDPN-204ENST00000475043 RRAS2P62070 204 aaPredicted RBP6.86□□□□□ -1.31
PDPN-204ENST00000475043 IAH1Q2TAA2 248 aaPredicted RBP6.86□□□□□ -1.31
PDPN-204ENST00000475043 CNPY1Q3B7I2 92 aa6.86□□□□□ -1.31
PDPN-204ENST00000475043 C1orf194Q5T5A4 169 aa6.86□□□□□ -1.31
PDPN-204ENST00000475043 GSG1LQ6UXU4 331 aa6.86□□□□□ -1.31
PDPN-204ENST00000475043 BPIFCQ8NFQ6 507 aa6.86□□□□□ -1.31
PDPN-204ENST00000475043 OR4D5Q8NGN0 318 aa6.86□□□□□ -1.31
PDPN-204ENST00000475043 LINC00476Q8WZB0 136 aa6.86□□□□□ -1.31
PDPN-204ENST00000475043 WDR12Q9GZL7 423 aaKnown RBP6.86□□□□□ -1.31
PDPN-204ENST00000475043 MFFQ9GZY8 342 aa6.86□□□□□ -1.31
PDPN-204ENST00000475043 C20orf85Q9H1P6 137 aa6.86□□□□□ -1.31
PDPN-204ENST00000475043 SEPSECSQ9HD40 501 aaKnown RBP6.86□□□□□ -1.31
PDPN-204ENST00000475043 TMA7Q9Y2S6 64 aaKnown RBP6.86□□□□□ -1.31
PDPN-204ENST00000475043 TRAV6A0A075B6T7 132 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 IGHV4-28A0A0C4DH34 117 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 H3BMM0 161 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 PLA2G10O15496 165 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 IGKV3-20P01619 116 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 IL5P05113 134 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 METTL15P1P0C7V9 234 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 MIFP14174 115 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 PSMB3P49720 205 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 DEFB1P60022 68 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 GDF5OSQ5U4N7 250 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 TMEM182Q6ZP80 229 aaPredicted RBP6.85□□□□□ -1.31
PDPN-204ENST00000475043 TMEM144Q7Z5S9 345 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 ZBTB8BQ8NAP8 495 aaPredicted RBP6.85□□□□□ -1.31
PDPN-204ENST00000475043 OR1B1Q8NGR6 318 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 MITD1Q8WV92 249 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 SMIM8Q96KF7 97 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 TMEM147Q9BVK8 224 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 C1QTNF4Q9BXJ3 329 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 DOK5Q9P104 306 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 XCL2Q9UBD3 114 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 TBC1D24Q9ULP9 559 aa6.85□□□□□ -1.31
PDPN-204ENST00000475043 hCG_2014768A0A024R1R8 64 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 ZNF98A6NK75 572 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 FAM25EA8MYX2 175 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 CCSO14618 274 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 CCNKO75909 580 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 TCRBP04435 133 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 RBMY1A1P0DJD3 496 aaKnown RBP6.84□□□□□ -1.31
PDPN-204ENST00000475043 RBMY1CP0DJD4 496 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 HLA-DRB4P13762 266 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 S100A7P31151 101 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 GALR1P47211 349 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 ZNF846Q147U1 533 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 RBMY1FQ15415 496 aaKnown RBP6.84□□□□□ -1.31
PDPN-204ENST00000475043 CYP2G1PQ6ZSU1 146 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 Q8NAQ8 132 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 OR10P1Q8NGE3 313 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 OR4B1Q8NGF8 309 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 C16orf92Q96LL3 132 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 RSG1Q9BU20 258 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 SLC25A32Q9H2D1 315 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 NUDT15Q9NV35 164 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 HLA-DRB4X5D2U9 266 aa6.84□□□□□ -1.31
PDPN-204ENST00000475043 DYNC2H1Q8NCM8 4307 aaKnown RBP6.83□□□□□ -1.32
PDPN-204ENST00000475043 IGHV3OR16-12A0A075B7B8 117 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 C5orf51A6NDU8 294 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 PMS2P5A8MQ11 134 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms