RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 CYB5R2Q6BCY4 276 aa16.56■□□□□ 0.24
SMIM11A-204ENST00000474455 PQLC2Q6ZP29 291 aa16.56■□□□□ 0.24
SMIM11A-204ENST00000474455 RPEQ96AT9 228 aa16.56■□□□□ 0.24
SMIM11A-204ENST00000474455 RNF2Q99496 336 aa16.56■□□□□ 0.24
SMIM11A-204ENST00000474455 PRNDQ9UKY0 176 aa16.56■□□□□ 0.24
SMIM11A-204ENST00000474455 ZNF257Q9Y2Q1 563 aa16.56■□□□□ 0.24
SMIM11A-204ENST00000474455 MXRA5Q9NR99 2828 aa16.55■□□□□ 0.24
SMIM11A-204ENST00000474455 IGHV1-3A0A0C4DH29 117 aa16.55■□□□□ 0.24
SMIM11A-204ENST00000474455 H0YJW9 148 aa16.55■□□□□ 0.24
SMIM11A-204ENST00000474455 ISLRO14498 428 aa16.55■□□□□ 0.24
SMIM11A-204ENST00000474455 GPX1P07203 203 aa16.55■□□□□ 0.24
SMIM11A-204ENST00000474455 G0S2P27469 103 aa16.55■□□□□ 0.24
SMIM11A-204ENST00000474455 SAA4P35542 130 aa16.55■□□□□ 0.24
SMIM11A-204ENST00000474455 TIGITQ495A1 244 aa16.55■□□□□ 0.24
SMIM11A-204ENST00000474455 FBLN7Q53RD9 439 aa16.55■□□□□ 0.24
SMIM11A-204ENST00000474455 CENPWQ5EE01 88 aa16.55■□□□□ 0.24
SMIM11A-204ENST00000474455 OR4A47Q6IF82 309 aa16.55■□□□□ 0.24
SMIM11A-204ENST00000474455 CUBNO60494 3623 aa16.55■□□□□ 0.24
SMIM11A-204ENST00000474455 DLEU1O43261 78 aa16.54■□□□□ 0.24
SMIM11A-204ENST00000474455 GATA3P23771 443 aa16.54■□□□□ 0.24
SMIM11A-204ENST00000474455 CD24P25063 80 aa16.54■□□□□ 0.24
SMIM11A-204ENST00000474455 TAS2R45P59539 299 aa16.54■□□□□ 0.24
SMIM11A-204ENST00000474455 OR8I2Q8N0Y5 310 aa16.54■□□□□ 0.24
SMIM11A-204ENST00000474455 RITA1Q96K30 269 aa16.54■□□□□ 0.24
SMIM11A-204ENST00000474455 AMMECR1Q9Y4X0 333 aaPredicted RBP16.54■□□□□ 0.24
SMIM11A-204ENST00000474455 A0A1W2PPI3 338 aa16.54■□□□□ 0.24
SMIM11A-204ENST00000474455 NPFFO15130 113 aa16.54■□□□□ 0.24
SMIM11A-204ENST00000474455 MIR17HGQ75NE6 70 aa16.54■□□□□ 0.24
SMIM11A-204ENST00000474455 MOB3BQ86TA1 216 aa16.54■□□□□ 0.24
SMIM11A-204ENST00000474455 OR5AN1Q8NGI8 311 aa16.54■□□□□ 0.24
SMIM11A-204ENST00000474455 SLC35D1Q9NTN3 355 aa16.54■□□□□ 0.24
SMIM11A-204ENST00000474455 IGHV1-69DA0A0B4J2H0 117 aa16.53■□□□□ 0.24
SMIM11A-204ENST00000474455 CYSRT1A8MQ03 144 aa16.53■□□□□ 0.24
SMIM11A-204ENST00000474455 IGHV1-69P01742 117 aa16.53■□□□□ 0.24
SMIM11A-204ENST00000474455 BTF3P20290 206 aaKnown RBP16.53■□□□□ 0.24
SMIM11A-204ENST00000474455 COMPP49747 757 aaPredicted RBP16.53■□□□□ 0.24
SMIM11A-204ENST00000474455 KRTAP1-1Q07627 177 aa16.53■□□□□ 0.24
SMIM11A-204ENST00000474455 FAM71F2Q6NXP2 309 aa16.53■□□□□ 0.24
SMIM11A-204ENST00000474455 TMEM136Q6ZRR5 245 aa16.53■□□□□ 0.24
SMIM11A-204ENST00000474455 VN1R17PQ8TDU5 208 aa16.53■□□□□ 0.24
SMIM11A-204ENST00000474455 OR51B2Q9Y5P1 312 aa16.53■□□□□ 0.24
SMIM11A-204ENST00000474455 HLA-DQA1P01909 254 aa16.52■□□□□ 0.24
SMIM11A-204ENST00000474455 AMY1AP04745 511 aa16.52■□□□□ 0.24
SMIM11A-204ENST00000474455 PSG5Q15238 335 aa16.52■□□□□ 0.24
SMIM11A-204ENST00000474455 KCNS1Q96KK3 526 aa16.52■□□□□ 0.24
SMIM11A-204ENST00000474455 GNB4Q9HAV0 340 aa16.52■□□□□ 0.24
SMIM11A-204ENST00000474455 NAT8BQ9UHF3 227 aa16.52■□□□□ 0.24
SMIM11A-204ENST00000474455 A0A1W2PRE2 83 aa16.52■□□□□ 0.23
SMIM11A-204ENST00000474455 SRRM4A7MD48 611 aaKnown RBP16.52■□□□□ 0.23
SMIM11A-204ENST00000474455 TIMM23O14925 209 aa16.52■□□□□ 0.23
SMIM11A-204ENST00000474455 LINC00614P0C842 121 aa16.52■□□□□ 0.23
SMIM11A-204ENST00000474455 PRCDQ00LT1 54 aa16.52■□□□□ 0.23
SMIM11A-204ENST00000474455 TMEM208Q9BTX3 173 aa16.52■□□□□ 0.23
SMIM11A-204ENST00000474455 PLEKHA3Q9HB20 300 aa16.52■□□□□ 0.23
SMIM11A-204ENST00000474455 PAM16Q9Y3D7 125 aa16.52■□□□□ 0.23
SMIM11A-204ENST00000474455 GOLT1BQ9Y3E0 138 aa16.52■□□□□ 0.23
SMIM11A-204ENST00000474455 CRYBB3P26998 211 aa16.51■□□□□ 0.23
SMIM11A-204ENST00000474455 RASL11AQ6T310 242 aa16.51■□□□□ 0.23
SMIM11A-204ENST00000474455 SMR3AQ99954 134 aa16.51■□□□□ 0.23
SMIM11A-204ENST00000474455 MRPL32Q9BYC8 188 aaKnown RBP16.51■□□□□ 0.23
SMIM11A-204ENST00000474455 COMMD5Q9GZQ3 224 aa16.51■□□□□ 0.23
SMIM11A-204ENST00000474455 FBXL7Q9UJT9 491 aa16.51■□□□□ 0.23
SMIM11A-204ENST00000474455 SMIM27A0A1W2PRY6 76 aa16.5■□□□□ 0.23
SMIM11A-204ENST00000474455 C2orf83Q53S99 150 aa16.5■□□□□ 0.23
SMIM11A-204ENST00000474455 CFHR4Q92496 578 aa16.5■□□□□ 0.23
SMIM11A-204ENST00000474455 DIRC3C9JPN6 131 aa16.5■□□□□ 0.23
SMIM11A-204ENST00000474455 UPK2O00526 184 aa16.5■□□□□ 0.23
SMIM11A-204ENST00000474455 ZNF253O75346 499 aa16.5■□□□□ 0.23
SMIM11A-204ENST00000474455 OR5I1Q13606 314 aa16.5■□□□□ 0.23
SMIM11A-204ENST00000474455 TDRG1Q3Y452 100 aa16.5■□□□□ 0.23
SMIM11A-204ENST00000474455 MINOS1Q5TGZ0 78 aa16.5■□□□□ 0.23
SMIM11A-204ENST00000474455 Q8N976 141 aa16.5■□□□□ 0.23
SMIM11A-204ENST00000474455 C22orf15Q8WYQ4 148 aa16.5■□□□□ 0.23
SMIM11A-204ENST00000474455 TBL2Q9Y4P3 447 aaKnown RBP16.5■□□□□ 0.23
SMIM11A-204ENST00000474455 MINOS1-NBL1R4GNA1 71 aa16.5■□□□□ 0.23
SMIM11A-204ENST00000474455 J3QLI3 93 aa16.49■□□□□ 0.23
SMIM11A-204ENST00000474455 CD33P20138 364 aa16.49■□□□□ 0.23
SMIM11A-204ENST00000474455 CNTFRP26992 372 aa16.49■□□□□ 0.23
SMIM11A-204ENST00000474455 CEACAM3P40198 252 aa16.49■□□□□ 0.23
SMIM11A-204ENST00000474455 C19orf35Q6ZS72 473 aa16.49■□□□□ 0.23
SMIM11A-204ENST00000474455 NRN1Q9NPD7 142 aa16.49■□□□□ 0.23
SMIM11A-204ENST00000474455 F2Z2F3 143 aa16.48■□□□□ 0.23
SMIM11A-204ENST00000474455 APOA2P02652 100 aa16.48■□□□□ 0.23
SMIM11A-204ENST00000474455 COL5A1-AS1Q5SY13 56 aa16.48■□□□□ 0.23
SMIM11A-204ENST00000474455 FAM120AOSQ5T036 256 aa16.48■□□□□ 0.23
SMIM11A-204ENST00000474455 IL17RELQ6ZVW7 336 aa16.48■□□□□ 0.23
SMIM11A-204ENST00000474455 BCL6BQ8N143 479 aaPredicted RBP16.48■□□□□ 0.23
SMIM11A-204ENST00000474455 OR1L8Q8NGR8 309 aa16.48■□□□□ 0.23
SMIM11A-204ENST00000474455 WIPF2Q8TF74 440 aaPredicted RBP16.48■□□□□ 0.23
SMIM11A-204ENST00000474455 WASHC3Q9Y3C0 194 aa16.48■□□□□ 0.23
SMIM11A-204ENST00000474455 IZUMO1RA6ND01 250 aa16.48■□□□□ 0.23
SMIM11A-204ENST00000474455 ACTL6BO94805 426 aa16.48■□□□□ 0.23
SMIM11A-204ENST00000474455 CTRLP40313 264 aa16.48■□□□□ 0.23
SMIM11A-204ENST00000474455 SUMO1P63165 101 aaKnown RBP16.48■□□□□ 0.23
SMIM11A-204ENST00000474455 IGF2BP2-AS1Q96M15 143 aa16.48■□□□□ 0.23
SMIM11A-204ENST00000474455 A0A1W2PS18 150 aa16.47■□□□□ 0.23
SMIM11A-204ENST00000474455 C8orf88P0DMB2 117 aa16.47■□□□□ 0.23
SMIM11A-204ENST00000474455 AMTP48728 403 aa16.47■□□□□ 0.23
SMIM11A-204ENST00000474455 KRTDAPP60985 99 aa16.47■□□□□ 0.23
SMIM11A-204ENST00000474455 ZNF503Q96F45 646 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms