RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 ZNF680Q8NEM1 530 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 ZNRF2Q8NHG8 242 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 CD200R1Q8TD46 325 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 RPS4Y2Q8TD47 263 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 GPR119Q8TDV5 335 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 C4orf3Q8WVX3 66 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 RNF133Q8WVZ7 376 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 APOBEC3DQ96AK3 386 aaPredicted RBP1.41□□□□□ -2.18
CALD1-216ENST00000473714 TAMM41Q96BW9 452 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 PPCDCQ96CD2 204 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 TLCD1Q96CP7 247 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 CHMP6Q96FZ7 201 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 REEP6Q96HR9 211 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 CCDC42Q96M95 316 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 OR4C12Q96R67 309 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 SHANK2-AS3Q9BTD1 123 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 TMEM70Q9BUB7 260 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 LINC00470Q9BZP3 86 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 SLC22A4Q9H015 551 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 MS4A6AQ9H2W1 248 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 TXNIPQ9H3M7 391 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 MAP1LC3AQ9H492 121 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 PRO0461Q9UI25 63 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 FIS1Q9Y3D6 152 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 ICOSQ9Y6W8 199 aa1.41□□□□□ -2.18
CALD1-216ENST00000473714 IGHV3-21A0A0B4J1V1 117 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 A0A0B4J2C4 111 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 OR5H14A6NHG9 310 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 C8orf87E5RJ46 101 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 ISLRO14498 428 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 ATP5HO75947 161 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 RPP14O95059 124 aaKnown RBP1.4□□□□□ -2.19
CALD1-216ENST00000473714 SERPINE1P05121 402 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 C8GP07360 202 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 RPS17P08708 135 aaKnown RBP1.4□□□□□ -2.19
CALD1-216ENST00000473714 KRTAP2-3P0C7H8 128 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 OR13C7P0DN81 318 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 PSKH1P11801 424 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 MYL12AP19105 171 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 INPP1P49441 399 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 GDI2P50395 445 aaKnown RBP1.4□□□□□ -2.19
CALD1-216ENST00000473714 H2BFSP57053 126 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 RBX1P62877 108 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 ELF3P78545 371 aaPredicted RBP1.4□□□□□ -2.19
CALD1-216ENST00000473714 SARNPP82979 210 aaKnown RBP1.4□□□□□ -2.19
CALD1-216ENST00000473714 EIF4EBP1Q13541 118 aaPredicted RBP1.4□□□□□ -2.19
CALD1-216ENST00000473714 RSU1Q15404 277 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 SPA17Q15506 151 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 BATFQ16520 125 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 ZNF181Q2M3W8 571 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 LDLRAD2Q5SZI1 272 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 FAM104BQ5XKR9 115 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 HIST2H3AQ71DI3 136 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 FAM19A3Q7Z5A8 133 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 C10orf67Q8IYJ2 551 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 SLC35G3Q8N808 338 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 ZNF709Q8N972 641 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 ZNF565Q8N9K5 539 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 ST20-AS1Q8NBB2 130 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 SLC30A7Q8NEW0 376 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 OR9I1Q8NGQ6 314 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 OR4A5Q8NH83 315 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 SLC25A40Q8TBP6 338 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 KLF14Q8TD94 323 aaPredicted RBP1.4□□□□□ -2.19
CALD1-216ENST00000473714 EEF1AKMT1Q8WVE0 214 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 TNFAIP8L1Q8WVP5 186 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 HIST1H2BAQ96A08 127 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 RMI2Q96E14 147 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 PACRGQ96M98 296 aaPredicted RBP1.4□□□□□ -2.19
CALD1-216ENST00000473714 PRSS27Q9BQR3 290 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 KRTAP2-4Q9BYR9 128 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 OR2J1Q9GZK6 312 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 DERL2Q9GZP9 239 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 VSIRQ9H7M9 311 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 GUCA1BQ9UMX6 200 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 WASHC3Q9Y3C0 194 aa1.4□□□□□ -2.19
CALD1-216ENST00000473714 LSM5Q9Y4Y9 91 aaKnown RBP1.4□□□□□ -2.19
CALD1-216ENST00000473714 TRAV8-1A0A0A6YYK1 113 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 TRAV10A0A0B4J240 114 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 NBDYA0A0U1RRE5 68 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 C5orf49A4QMS7 147 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 I3L521 148 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 CXCR6O00574 342 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 NDUFA2O43678 99 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 DCTN3O75935 186 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 GYPAP02724 150 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 TRGV3P03979 118 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 ISG15P05161 165 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 IL6P05231 212 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 PFN1P07737 140 aaKnown RBP1.39□□□□□ -2.19
CALD1-216ENST00000473714 CD7P09564 240 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 CD36P16671 472 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 CD24P25063 80 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 CRABP1P29762 137 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 RPL12P30050 165 aaKnown RBP1.39□□□□□ -2.19
CALD1-216ENST00000473714 CDKN2CP42773 168 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 PSMB3P49720 205 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 AKR1C2P52895 323 aa1.39□□□□□ -2.19
CALD1-216ENST00000473714 NKX2-5P52952 324 aaPredicted RBP1.39□□□□□ -2.19
CALD1-216ENST00000473714 TCL1AP56279 114 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms