RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 CCL3L1P16619 93 aa11.3□□□□□ -0.6
ABCF3-210ENST00000473311 USF1P22415 310 aaPredicted RBP11.3□□□□□ -0.6
ABCF3-210ENST00000473311 ZNF833PQ6ZTB9 187 aa11.3□□□□□ -0.6
ABCF3-210ENST00000473311 C18orf32Q8TCD1 76 aa11.3□□□□□ -0.6
ABCF3-210ENST00000473311 CACNG8Q8WXS5 425 aa11.3□□□□□ -0.6
ABCF3-210ENST00000473311 FAM168AQ92567 244 aa11.3□□□□□ -0.6
ABCF3-210ENST00000473311 ZNF479Q96JC4 524 aa11.3□□□□□ -0.6
ABCF3-210ENST00000473311 GAGE12HA6NDE8 117 aa11.3□□□□□ -0.6
ABCF3-210ENST00000473311 FAM27E3Q08E93 113 aa11.3□□□□□ -0.6
ABCF3-210ENST00000473311 C22orf34Q6ZV56 151 aa11.3□□□□□ -0.6
ABCF3-210ENST00000473311 FNDC4Q9H6D8 234 aaPredicted RBP11.3□□□□□ -0.6
ABCF3-210ENST00000473311 ZNF355PQ9NSJ1 428 aa11.3□□□□□ -0.6
ABCF3-210ENST00000473311 AMMECR1Q9Y4X0 333 aaPredicted RBP11.3□□□□□ -0.6
ABCF3-210ENST00000473311 SMG1Q96Q15 3661 aaKnown RBP11.29□□□□□ -0.6
ABCF3-210ENST00000473311 IZUMO1RA6ND01 250 aa11.29□□□□□ -0.6
ABCF3-210ENST00000473311 C10orf55Q5SWW7 151 aa11.29□□□□□ -0.6
ABCF3-210ENST00000473311 VSTM2AQ8TAG5 236 aa11.29□□□□□ -0.6
ABCF3-210ENST00000473311 SCRT2Q9NQ03 307 aa11.29□□□□□ -0.6
ABCF3-210ENST00000473311 K7EQM0 130 aa11.29□□□□□ -0.6
ABCF3-210ENST00000473311 KLF5Q13887 457 aaPredicted RBP11.29□□□□□ -0.6
ABCF3-210ENST00000473311 C3orf36Q3SXR2 165 aa11.29□□□□□ -0.6
ABCF3-210ENST00000473311 C10orf113Q5VZT2 155 aa11.29□□□□□ -0.6
ABCF3-210ENST00000473311 OR10AG1Q8NH19 301 aa11.29□□□□□ -0.6
ABCF3-210ENST00000473311 FLYWCH2Q96CP2 140 aaKnown RBP11.29□□□□□ -0.6
ABCF3-210ENST00000473311 ZNF714Q96N38 554 aa11.29□□□□□ -0.6
ABCF3-210ENST00000473311 SPATA25Q9BR10 227 aa11.29□□□□□ -0.6
ABCF3-210ENST00000473311 PAXXQ9BUH6 204 aa11.29□□□□□ -0.6
ABCF3-210ENST00000473311 OR11H12B2RN74 326 aa11.28□□□□□ -0.6
ABCF3-210ENST00000473311 CD40P25942 277 aa11.28□□□□□ -0.6
ABCF3-210ENST00000473311 ZCCHC24Q8N2G6 241 aaKnown RBP11.28□□□□□ -0.6
ABCF3-210ENST00000473311 OR11H1Q8NG94 326 aa11.28□□□□□ -0.6
ABCF3-210ENST00000473311 OR11H2Q8NH07 326 aa11.28□□□□□ -0.6
ABCF3-210ENST00000473311 NPIPB3Q92617 1050 aa11.28□□□□□ -0.6
ABCF3-210ENST00000473311 PLXNB1O43157 2135 aa11.28□□□□□ -0.6
ABCF3-210ENST00000473311 HTR1DP28221 377 aa11.28□□□□□ -0.6
ABCF3-210ENST00000473311 TEX36Q5VZQ5 186 aa11.28□□□□□ -0.6
ABCF3-210ENST00000473311 MFAP2P55001 183 aa11.27□□□□□ -0.6
ABCF3-210ENST00000473311 WT1-ASQ06250 92 aa11.27□□□□□ -0.6
ABCF3-210ENST00000473311 TNXAQ16473 311 aa11.27□□□□□ -0.6
ABCF3-210ENST00000473311 TMEM97Q5BJF2 176 aa11.27□□□□□ -0.6
ABCF3-210ENST00000473311 BPIFA4PQ86YQ2 179 aa11.27□□□□□ -0.6
ABCF3-210ENST00000473311 OR1L4Q8NGR5 311 aa11.27□□□□□ -0.6
ABCF3-210ENST00000473311 OR10X1Q8NGY0 326 aa11.27□□□□□ -0.6
ABCF3-210ENST00000473311 LAMA5O15230 3695 aa11.27□□□□□ -0.6
ABCF3-210ENST00000473311 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.27□□□□□ -0.61
ABCF3-210ENST00000473311 PEX7O00628 323 aa11.27□□□□□ -0.61
ABCF3-210ENST00000473311 PLAUP00749 431 aa11.27□□□□□ -0.61
ABCF3-210ENST00000473311 TMEM177Q53S58 311 aa11.27□□□□□ -0.61
ABCF3-210ENST00000473311 PIP4P1Q86T03 277 aa11.27□□□□□ -0.61
ABCF3-210ENST00000473311 OR5AN1Q8NGI8 311 aa11.27□□□□□ -0.61
ABCF3-210ENST00000473311 WIPF2Q8TF74 440 aaPredicted RBP11.27□□□□□ -0.61
ABCF3-210ENST00000473311 H1FXQ92522 213 aaKnown RBP11.27□□□□□ -0.61
ABCF3-210ENST00000473311 GEMIN7Q9H840 131 aaKnown RBP11.27□□□□□ -0.61
ABCF3-210ENST00000473311 SLC25A17O43808 307 aa11.27□□□□□ -0.61
ABCF3-210ENST00000473311 HIST1H1EP10412 219 aaKnown RBP11.27□□□□□ -0.61
ABCF3-210ENST00000473311 PATE2Q6UY27 113 aa11.27□□□□□ -0.61
ABCF3-210ENST00000473311 RBMXL3Q8N7X1 1067 aaKnown RBP11.27□□□□□ -0.61
ABCF3-210ENST00000473311 OR4C13Q8NGP0 309 aa11.27□□□□□ -0.61
ABCF3-210ENST00000473311 CRYGCP07315 174 aa11.26□□□□□ -0.61
ABCF3-210ENST00000473311 TNFRSF1AP19438 455 aa11.26□□□□□ -0.61
ABCF3-210ENST00000473311 RPL24P83731 157 aaKnown RBP11.26□□□□□ -0.61
ABCF3-210ENST00000473311 DIAPH2-AS1Q14236 149 aa11.26□□□□□ -0.61
ABCF3-210ENST00000473311 ZNF329Q86UD4 541 aa11.26□□□□□ -0.61
ABCF3-210ENST00000473311 ST6GALNAC6Q969X2 333 aa11.26□□□□□ -0.61
ABCF3-210ENST00000473311 A0A0G2JLM5 398 aa11.26□□□□□ -0.61
ABCF3-210ENST00000473311 TCRBV4S1A1TA0A5B7 111 aa11.26□□□□□ -0.61
ABCF3-210ENST00000473311 TSPAN13O95857 204 aa11.26□□□□□ -0.61
ABCF3-210ENST00000473311 SUB1P53999 127 aaKnown RBP eCLIP11.26□□□□□ -0.611e-7■■■■■ 35.4
ABCF3-210ENST00000473311 MGAQ8IWI9 3026 aa11.25□□□□□ -0.61
ABCF3-210ENST00000473311 CEACAM4O75871 244 aa11.25□□□□□ -0.61
ABCF3-210ENST00000473311 GNG5P63218 68 aa11.25□□□□□ -0.61
ABCF3-210ENST00000473311 MEF2CQ06413 473 aaPredicted RBP11.25□□□□□ -0.61
ABCF3-210ENST00000473311 FOXI2Q6ZQN5 318 aa11.25□□□□□ -0.61
ABCF3-210ENST00000473311 NUP35Q8NFH5 326 aa11.25□□□□□ -0.61
ABCF3-210ENST00000473311 OR4A5Q8NH83 315 aa11.25□□□□□ -0.61
ABCF3-210ENST00000473311 TMEM167AQ8TBQ9 72 aa11.25□□□□□ -0.61
ABCF3-210ENST00000473311 ZC2HC1AQ96GY0 325 aa11.25□□□□□ -0.61
ABCF3-210ENST00000473311 THYN1Q9P016 225 aa11.25□□□□□ -0.61
ABCF3-210ENST00000473311 SPCS1Q9Y6A9 102 aa11.25□□□□□ -0.61
ABCF3-210ENST00000473311 CGB1A6NKQ9 187 aa11.25□□□□□ -0.61
ABCF3-210ENST00000473311 SYS1-DBNDD2H3BUS1 97 aa11.25□□□□□ -0.61
ABCF3-210ENST00000473311 TMEM200BQ69YZ2 307 aa11.25□□□□□ -0.61
ABCF3-210ENST00000473311 FAM231DQ6ZW35 169 aa11.25□□□□□ -0.61
ABCF3-210ENST00000473311 LINC00305Q7Z4B0 112 aa11.25□□□□□ -0.61
ABCF3-210ENST00000473311 H3BUT2 72 aa11.24□□□□□ -0.61
ABCF3-210ENST00000473311 FABP2P12104 132 aa11.24□□□□□ -0.61
ABCF3-210ENST00000473311 BLNKQ8WV28 456 aa11.24□□□□□ -0.61
ABCF3-210ENST00000473311 MBD6Q96DN6 1003 aa11.24□□□□□ -0.61
ABCF3-210ENST00000473311 GRAMD2BQ96HH9 432 aa11.24□□□□□ -0.61
ABCF3-210ENST00000473311 SGK494Q96LW2 274 aa11.24□□□□□ -0.61
ABCF3-210ENST00000473311 MRPL16Q9NX20 251 aaKnown RBP11.24□□□□□ -0.61
ABCF3-210ENST00000473311 PGPEP1Q9NXJ5 209 aa11.24□□□□□ -0.61
ABCF3-210ENST00000473311 MRPL36Q9P0J6 103 aaKnown RBP11.24□□□□□ -0.61
ABCF3-210ENST00000473311 SSUH2Q9Y2M2 353 aa11.24□□□□□ -0.61
ABCF3-210ENST00000473311 OTOGLQ3ZCN5 2332 aa11.24□□□□□ -0.61
ABCF3-210ENST00000473311 DMXL1Q9Y485 3027 aa11.24□□□□□ -0.61
ABCF3-210ENST00000473311 PKDREJQ9NTG1 2253 aa11.24□□□□□ -0.61
ABCF3-210ENST00000473311 IGKV1D-37A0A075B6S9 117 aa11.24□□□□□ -0.61
ABCF3-210ENST00000473311 A0A087X0K7 114 aa11.24□□□□□ -0.61
ABCF3-210ENST00000473311 INS-IGF2F8WCM5 200 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms