RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CFAP43Q8NDM7 1665 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 TCHHQ07283 1943 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 NUP205Q92621 2012 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 CDK13Q14004 1512 aaKnown RBP2.09□□□□□ -2.07
CD46-213ENST00000471987 TRAV27A0A087WT01 109 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 A0A0J9YXV3 536 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 IRGMA1A4Y4 181 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 TMEM262E9PQX1 116 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 TMEM250H0YL14 139 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 LYZL6O75951 148 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 NAPSAO96009 420 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 TRBV12-3P01733 135 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 SEC11BP0C7V7 166 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 CTSEP14091 401 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 NFYBP25208 207 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 SNCAP37840 140 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 INPP1P49441 399 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 NDUFA8P51970 172 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 FOXA3P55318 350 aaPredicted RBP2.09□□□□□ -2.07
CD46-213ENST00000471987 HERVK_113P63121 156 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 ATP5G2Q06055 141 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 HMGN3Q15651 99 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 RRN3P1Q2M238 152 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 COA6Q5JTJ3 125 aaKnown RBP2.09□□□□□ -2.07
CD46-213ENST00000471987 CLLU1OSQ5K130 101 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 Q6AWC8 147 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 BRD3OSQ6XYD6 125 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 Q6ZUT4 128 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 C1orf174Q8IYL3 243 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 C3orf22Q8N5N4 141 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 YIPF7Q8N8F6 280 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 OR11H7Q8NGC8 314 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 OR4K13Q8NH42 304 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 MRPL30Q8TCC3 161 aaKnown RBP2.09□□□□□ -2.07
CD46-213ENST00000471987 FAM3DQ96BQ1 224 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 NEURL3Q96EH8 262 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 KCNS1Q96KK3 526 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 C2orf50Q96LR7 162 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 HIST1H2BLQ99880 126 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 OTORQ9NRC9 128 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 CA10Q9NS85 328 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 TMEM106BQ9NUM4 274 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 ASF1BQ9NVP2 202 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 FBXL12Q9NXK8 326 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 TAAR3PQ9P1P4 343 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 UQCR10Q9UDW1 63 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 TIAM1Q13009 1591 aa2.09□□□□□ -2.08
CD46-213ENST00000471987 DSPPQ9NZW4 1301 aa2.09□□□□□ -2.08
CD46-213ENST00000471987 LAMC1P11047 1609 aa2.09□□□□□ -2.08
CD46-213ENST00000471987 UNC80Q8N2C7 3258 aa2.09□□□□□ -2.08
CD46-213ENST00000471987 PTPRFP10586 1907 aa2.09□□□□□ -2.08
CD46-213ENST00000471987 CDC42BPAQ5VT25 1732 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 SUPT6HQ7KZ85 1726 aaKnown RBP2.08□□□□□ -2.08
CD46-213ENST00000471987 TRANK1O15050 2925 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 RGPD4Q7Z3J3 1758 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 CUX1P39880 1505 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 URB2Q14146 1524 aaKnown RBP2.08□□□□□ -2.08
CD46-213ENST00000471987 LRRC7Q96NW7 1537 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 TRGV10A0A0A0MS01 117 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 A0A0D9SG52 128 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 LOC389332A0A1B0GUA5 103 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 M0R233 179 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 GEMIN2O14893 280 aaKnown RBP2.08□□□□□ -2.08
CD46-213ENST00000471987 UBE2L6O14933 153 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 UQCRQO14949 82 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 AGPAT2O15120 278 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 KLF7O75840 302 aaPredicted RBP2.08□□□□□ -2.08
CD46-213ENST00000471987 CD70P32970 193 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 SDC2P34741 201 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 RPL22P35268 128 aaKnown RBP2.08□□□□□ -2.08
CD46-213ENST00000471987 CXCL5P42830 114 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 PSMB3P49720 205 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 ZNF83P51522 516 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 P2RX1P51575 399 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 MP68P56378 58 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 RPS21P63220 83 aaKnown RBP2.08□□□□□ -2.08
CD46-213ENST00000471987 CRADDP78560 199 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 QRFPP83859 136 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 ZNF90Q03938 601 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 AKR1C1Q04828 323 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 Q0VG73 95 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 AADACL3Q5VUY0 350 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 C1orf140Q5VVS0 124 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 C22orf39Q6P5X5 142 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 ALKAL2Q6UX46 152 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 UNQ9165/PRO28630Q6UXU0 137 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 TRAPPC6BQ86SZ2 158 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 WDR86Q86TI4 376 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 TMEM183AQ8IXX5 376 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 ATOH7Q8N100 152 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 SLC22A24Q8N4F4 322 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 LINC00337Q8N6G1 96 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 TMEM75Q8N9X5 138 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 LINC00301Q8NCQ3 95 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 OR4B1Q8NGF8 309 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 OR2T10Q8NGZ9 312 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 OR9G1Q8NH87 305 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 SGMS2Q8NHU3 365 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 C10orf82Q8WW14 230 aa2.08□□□□□ -2.08
CD46-213ENST00000471987 COPS9Q8WXC6 57 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms