RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 IGHV3OR16-10A0A075B7F0 116 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 IZUMO1RA6ND01 250 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 C17orf112F2Z3M2 114 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 H3BMG7 143 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 LGALS9O00182 355 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 CREBL2O60519 120 aaPredicted RBP2.42□□□□□ -2.02
SCN3A-207ENST00000471697 LMX1BO60663 402 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 SRSF10O75494 262 aaKnown RBP2.42□□□□□ -2.02
SCN3A-207ENST00000471697 SNCGO76070 127 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 UBL3O95164 117 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 IGLV2-8P01709 118 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 TRACP01848 142 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 MT-ND6P03923 174 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 PPP1CAP62136 330 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 MRPS36P82909 103 aaKnown RBP2.42□□□□□ -2.02
SCN3A-207ENST00000471697 KIAA0040Q15053 153 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 CST6Q15828 149 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 ZNF141Q15928 474 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 VMA21Q3ZAQ7 101 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 GFI1BQ5VTD9 330 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 FKBP1CQ5VVH2 108 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 C9orf57Q5W0N0 161 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 Q5XG85 94 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 UNQ9165/PRO28630Q6UXU0 137 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 LHFPL1Q86WI0 220 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 RPS19BP1Q86WX3 136 aaKnown RBP2.42□□□□□ -2.02
SCN3A-207ENST00000471697 PRR15Q8IV56 129 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 ZNF584Q8IVC4 421 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 ZNF709Q8N972 641 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 LINC01555Q8NAE3 123 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 OR52P1PQ8NH57 321 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 SGMS2Q8NHU3 365 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 ITLN1Q8WWA0 313 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 C2orf50Q96LR7 162 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 IGF2BP2-AS1Q96M15 143 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 VGLL1Q99990 258 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 PLEKHF2Q9H8W4 249 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 ZNF331Q9NQX6 463 aaPredicted RBP2.42□□□□□ -2.02
SCN3A-207ENST00000471697 COQ4Q9Y3A0 265 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 MED12LQ86YW9 2145 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 SCN2AQ99250 2005 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 TICRRQ7Z2Z1 1910 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 MADDQ8WXG6 1647 aa2.42□□□□□ -2.02
SCN3A-207ENST00000471697 STRCQ7RTU9 1775 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 ADGRL1O94910 1474 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 ALPK3Q96L96 1907 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 TRAV27A0A087WT01 109 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 IGKV6D-21A0A0A0MT36 114 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 IGHV3-35A0A0C4DH35 117 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 TRBV7-6A0A0J9YX20 115 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 LOC107984640A0A0U1RRK4 108 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 IRGMA1A4Y4 181 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 FAM24AA6NFZ4 105 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 TLCD2A6NGC4 264 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 PMS2P5A8MQ11 134 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 M0R381 172 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 SOCS1O15524 211 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 SSSCA1O60232 199 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 NDUFB2O95178 105 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 HLA-DMBP28068 263 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 OPRM1P35372 400 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 CXCL5P42830 114 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 LINC01547P58512 204 aaPredicted RBP2.41□□□□□ -2.02
SCN3A-207ENST00000471697 NANOS2P60321 138 aaKnown RBP2.41□□□□□ -2.02
SCN3A-207ENST00000471697 QRFPP83859 136 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 BVES-AS1Q5T3Y7 98 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 MRPL2Q5T653 305 aaKnown RBP2.41□□□□□ -2.02
SCN3A-207ENST00000471697 C9orf153Q5TBE3 101 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 SLC25A34Q6PIV7 304 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 DPPA3Q6W0C5 159 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 Q6ZS49 121 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 C18orf65Q6ZTR6 163 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 C15orf53Q8NAA6 179 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 OR10AG1Q8NH19 301 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 OTOSQ8NHW6 89 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 C18orf32Q8TCD1 76 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 C7orf33Q8WU49 177 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 TVP23CQ96ET8 276 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 BORCS8Q96FH0 119 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 PGLYRP2Q96PD5 576 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 SMIM14Q96QK8 99 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 PAXXQ9BUH6 204 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 AICDAQ9GZX7 198 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 AGPAT4-IT1Q9H0P7 198 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 CTSZQ9UBR2 303 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 MARCOQ9UEW3 520 aaPredicted RBP2.41□□□□□ -2.02
SCN3A-207ENST00000471697 KIAA0556O60303 1618 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 TOP2BQ02880 1626 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 DOCK4Q8N1I0 1966 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 TOPBP1Q92547 1522 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 SRCAPQ6ZRS2 3230 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 KIF26AQ9ULI4 1882 aaPredicted RBP2.41□□□□□ -2.02
SCN3A-207ENST00000471697 C10orf71Q711Q0 1435 aa2.41□□□□□ -2.02
SCN3A-207ENST00000471697 DOCK2Q92608 1830 aa2.4□□□□□ -2.02
SCN3A-207ENST00000471697 PXDNLA1KZ92 1463 aa2.4□□□□□ -2.02
SCN3A-207ENST00000471697 ANKRD12Q6UB98 2062 aa2.4□□□□□ -2.02
SCN3A-207ENST00000471697 MCM3APO60318 1980 aa2.4□□□□□ -2.02
SCN3A-207ENST00000471697 TRAV19A0A0A6YYK7 116 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 TRAV13-1A0A0B4J241 112 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 A0A1W2PPM0 123 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms