RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 SPANXDQ9BXN6 97 aa2.96□□□□□ -1.94
PRPF40A-206ENST00000471167 GABARAPL1Q9H0R8 117 aa2.96□□□□□ -1.94
PRPF40A-206ENST00000471167 OSTCQ9NRP0 149 aa2.96□□□□□ -1.94
PRPF40A-206ENST00000471167 EPDR1Q9UM22 224 aa2.96□□□□□ -1.94
PRPF40A-206ENST00000471167 IER3IP1Q9Y5U9 82 aa2.96□□□□□ -1.94
PRPF40A-206ENST00000471167 SBF1O95248 1867 aa2.96□□□□□ -1.94
PRPF40A-206ENST00000471167 MED14O60244 1454 aa2.96□□□□□ -1.94
PRPF40A-206ENST00000471167 PIKFYVEQ9Y2I7 2098 aa2.96□□□□□ -1.94
PRPF40A-206ENST00000471167 NCKAP5O14513 1909 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 TICRRQ7Z2Z1 1910 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 SCN2AQ99250 2005 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 ERICH3Q5RHP9 1530 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 ANKRD31Q8N7Z5 1873 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 PNMA8CA0A1B0GUJ8 204 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 A0A1W2PP18 115 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 HLA-DQA1P01909 254 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 SLC25A5P05141 298 aaKnown RBP2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 IGHV4-34P06331 123 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 PYYP10082 97 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 PTHLHP12272 177 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 HLA-DRB4P13762 266 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 RNASE4P34096 147 aaKnown RBP2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 AQP4P55087 323 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 TMEM258P61165 79 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 HIST1H4AP62805 103 aaKnown RBP2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 PCP2Q8IVA1 136 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 LINC00311Q8N616 119 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 C15orf56Q8N910 161 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 APCDD1LQ8NCL9 501 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 OR5D16Q8NGK9 328 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 DPH3Q96FX2 82 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 PRELID3AQ96N28 172 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 HIST1H2BLQ99880 126 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 NPCDR1Q9BY65 106 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 TTTY13Q9BZ97 58 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 PLA2G2FQ9BZM2 168 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 XAGE1AQ9HD64 81 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 FAM60AQ9NP50 221 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 COMMD3Q9UBI1 195 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 HLA-DRB4X5D2U9 266 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 DSCAML1Q8TD84 2053 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 A2ML1A8K2U0 1454 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 NCAPD3P42695 1498 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 MAGI1Q96QZ7 1491 aaPredicted RBP2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 ARHGAP35Q9NRY4 1499 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 FANCMQ8IYD8 2048 aa2.95□□□□□ -1.94
PRPF40A-206ENST00000471167 NLRC5Q86WI3 1866 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 ATG2AQ2TAZ0 1938 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 A6NED7 52 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 H3BQF6 201 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 UQCRQO14949 82 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 NDUFB2O95178 105 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 HRASP01112 189 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 TNFP01375 233 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 C1QAP02745 245 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 MT-ND6P03923 174 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 IGKV1-16P04430 117 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 CD2P06729 351 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 SPINK8P0C7L1 97 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 NTM-AS1Q6ZSK4 140 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 MIR17HGQ75NE6 70 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 AAED1Q7RTV5 226 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 TEN1Q86WV5 123 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 HIST3H2BBQ8N257 126 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 Q8N976 141 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 MORN4Q8NDC4 146 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 PLPP5Q8NEB5 264 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 OR10P1Q8NGE3 313 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 CIRBP-AS1Q8TBR5 109 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 RBPMSQ93062 196 aaKnown RBP2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 ZNF714Q96N38 554 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 GINS4Q9BRT9 223 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 RPRMQ9NS64 109 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 TXNL4BQ9NX01 149 aaKnown RBP2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 CEP164Q9UPV0 1460 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 CUL7Q14999 1698 aa2.94□□□□□ -1.94
PRPF40A-206ENST00000471167 CEP162Q5TB80 1403 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 KIAA1107Q9UPP5 1409 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 ATAD5Q96QE3 1844 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 TRGV10A0A0A0MS01 117 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 IGHV1-3A0A0C4DH29 117 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 A0A0J9YW62 118 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 C19orf84I3L1E1 186 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 KLF7O75840 302 aaPredicted RBP2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 SOD1P00441 154 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 TRGV3P03979 118 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 ZNF286BP0CG31 522 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 IGHV3-30-3P0DP02 117 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 CCL3P10147 92 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 FXYD7P58549 80 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 SNRPD3P62318 126 aaKnown RBP2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 SYCNQ0VAF6 134 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 EBI3Q14213 229 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 KISS1Q15726 138 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 EIF5AL1Q6IS14 154 aaKnown RBP2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 MRPL54Q6P161 138 aaKnown RBP2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 TMEM91Q6ZNR0 172 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 ADM2Q7Z4H4 148 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 KCNRGQ8N5I3 272 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 TTC9CQ8N5M4 171 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms