RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 PVRIGQ6DKI7 326 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 GTSCR1Q86UQ5 136 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 OR5AS1Q8N127 324 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 OR52N5Q8NH56 324 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 FAM57AQ8TBR7 257 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 IL1F10Q8WWZ1 152 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 H1FXQ92522 213 aaKnown RBP4.04□□□□□ -1.76
COL3A1-205ENST00000470167 DLX4Q92988 240 aaPredicted RBP4.04□□□□□ -1.76
COL3A1-205ENST00000470167 DSCR8Q96T75 97 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 UPK3BQ9BT76 320 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 PRSS22Q9GZN4 317 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 CXXC4Q9H2H0 198 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 SAP30LQ9HAJ7 183 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 FAM60AQ9NP50 221 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 RBM12B-AS1Q9P1G2 102 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 PCTPQ9UKL6 214 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 HHLA3Q9XRX5 114 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 ARL2-SNX15V9GYD0 113 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 SPTBN5Q9NRC6 3674 aaKnown RBP4.03□□□□□ -1.76
COL3A1-205ENST00000470167 IGHV1-24A0A0C4DH33 117 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 MDFIC2A0A1B0GVS7 189 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 TCRBV5S1A1TA0A578 114 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 A8MWV9 139 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 C8orf87E5RJ46 101 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 ATOX1O00244 68 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 EPPINO95925 133 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 TCL1BO95988 128 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 SAA4P35542 130 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 CXCL5P42830 114 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 HIST1H4AP62805 103 aaKnown RBP4.03□□□□□ -1.76
COL3A1-205ENST00000470167 HBG1P69891 147 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 HBG2P69892 147 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 MRPS36P82909 103 aaKnown RBP4.03□□□□□ -1.76
COL3A1-205ENST00000470167 ERCC8Q13216 396 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 LCN10Q6JVE6 187 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 DGAT2L6Q6ZPD8 337 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 ZNF584Q8IVC4 421 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 RAB42Q8N4Z0 105 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 OR2T6Q8NHC8 308 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 NT5CQ8TCD5 201 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 BRK1Q8WUW1 75 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 EEF1AKMT3Q96AZ1 226 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 KXD1Q9BQD3 176 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 PRSS27Q9BQR3 290 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 TM2D3Q9BRN9 247 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 DPH3P1Q9H4G8 78 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 SLC39A9Q9NUM3 307 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 OARD1Q9Y530 152 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 HILPDAQ9Y5L2 63 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 RGPD3A6NKT7 1758 aaPredicted RBP4.03□□□□□ -1.76
COL3A1-205ENST00000470167 CHD6Q8TD26 2715 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 VCANP13611 3396 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 DLG5Q8TDM6 1919 aa4.03□□□□□ -1.76
COL3A1-205ENST00000470167 FLNBO75369 2602 aaKnown RBP4.03□□□□□ -1.76
COL3A1-205ENST00000470167 NYNRINQ9P2P1 1898 aaKnown RBP4.03□□□□□ -1.77
COL3A1-205ENST00000470167 THSD7BQ9C0I4 1608 aa4.03□□□□□ -1.77
COL3A1-205ENST00000470167 FASNP49327 2511 aaKnown RBP4.02□□□□□ -1.77
COL3A1-205ENST00000470167 BCORQ6W2J9 1755 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 hDV102S1A0JD36 115 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 OVOL3O00110 214 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 SS18L1O75177 396 aaPredicted RBP4.02□□□□□ -1.77
COL3A1-205ENST00000470167 ASAH2BP0C7U1 165 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 HLA-DOBP13765 273 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 NPC2P61916 151 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 ZNF726P1Q15940 193 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 RSPO1Q2MKA7 263 aaPredicted RBP4.02□□□□□ -1.77
COL3A1-205ENST00000470167 FAM120AOSQ5T036 256 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 FAM219BQ5XKK7 198 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 FBXL14Q8N1E6 418 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 SLC22A24Q8N4F4 322 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 RNF182Q8N6D2 247 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 WWC2-AS2Q96NR7 200 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 HDHD3Q9BSH5 251 aaPredicted RBP4.02□□□□□ -1.77
COL3A1-205ENST00000470167 DCTN5Q9BTE1 182 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 OCIAD1Q9NX40 245 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 TP73-AS1Q9UF72 201 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 C19orf25Q9UFG5 118 aaPredicted RBP4.02□□□□□ -1.77
COL3A1-205ENST00000470167 SELENOKQ9Y6D0 94 aa4.02□□□□□ -1.77
COL3A1-205ENST00000470167 NUP210Q8TEM1 1887 aaPredicted RBP4.02□□□□□ -1.77
COL3A1-205ENST00000470167 MYLKQ15746 1914 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 USP9XQ93008 2570 aaPredicted RBP4.01□□□□□ -1.77
COL3A1-205ENST00000470167 TRAV2A0A0B4J234 112 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 TRAV17A0A0B4J275 112 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 PLAC8L1A1L4L8 177 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 F5H697 171 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 LINC01619G3V211 115 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 CCL24O00175 119 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 CST7O76096 145 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 WISP3O95389 354 aaPredicted RBP4.01□□□□□ -1.77
COL3A1-205ENST00000470167 HLA-DQA1P01909 254 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 COX5AP20674 150 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 CA6P23280 308 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 SSR2P43308 183 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 CFHR3Q02985 330 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 ZNF117Q03924 483 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 ZNF791Q3KP31 576 aaPredicted RBP4.01□□□□□ -1.77
COL3A1-205ENST00000470167 C1orf140Q5VVS0 124 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 COX8CQ7Z4L0 72 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 LY6G5BQ8NDX9 201 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 WFDC11Q8NEX6 87 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms