RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 LTBP1Q14766 1721 aa5.06□□□□□ -1.6
CCDC144A-212ENST00000470068 TRIP11Q15643 1979 aa5.06□□□□□ -1.6
CCDC144A-212ENST00000470068 A0A1W2PRX2 142 aa5.06□□□□□ -1.6
CCDC144A-212ENST00000470068 NPIPB5A8MRT5 1133 aa5.06□□□□□ -1.6
CCDC144A-212ENST00000470068 IGHV1-2P23083 117 aa5.06□□□□□ -1.6
CCDC144A-212ENST00000470068 PRTN3P24158 256 aa5.06□□□□□ -1.6
CCDC144A-212ENST00000470068 SSBP2P81877 361 aaPredicted RBP5.06□□□□□ -1.6
CCDC144A-212ENST00000470068 PAX8Q06710 450 aa5.06□□□□□ -1.6
CCDC144A-212ENST00000470068 ZCCHC24Q8N2G6 241 aaKnown RBP5.06□□□□□ -1.6
CCDC144A-212ENST00000470068 TMEM256Q8N2U0 113 aa5.06□□□□□ -1.6
CCDC144A-212ENST00000470068 DLX4Q92988 240 aaPredicted RBP5.06□□□□□ -1.6
CCDC144A-212ENST00000470068 WNT10AQ9GZT5 417 aa5.06□□□□□ -1.6
CCDC144A-212ENST00000470068 TET1Q8NFU7 2136 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 PRSS46E5RG02 174 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 SAA1P0DJI8 122 aaPredicted RBP5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 ZNF407Q9C0G0 2248 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 GBF1Q92538 1859 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 MDC1Q14676 2089 aaKnown RBP5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 SAA2-SAA4A0A096LPE2 208 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 A0A1B0GV90 55 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 H3BVH4 76 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 PATE4P0C8F1 98 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 CCL8P80075 99 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 QRFPP83859 136 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 KIAA1644Q3SXP7 199 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 MDS2Q8NDY4 140 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 DPH3Q96FX2 82 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 FOXC2Q99958 501 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 GGTLC1Q9BX51 225 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 K7EM74 188 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 IFITM1P13164 125 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 RHOHQ15669 191 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 NABP1Q96AH0 204 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 ZNF48Q96MX3 618 aaPredicted RBP5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 GSN-AS1Q9NRJ2 163 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 TRAV24A0A0B4J272 114 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 A0A1B0GWB2 263 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 FAM181BA6NEQ2 426 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 HIGD1CA8MV81 97 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 GZMBP10144 247 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 GRNP28799 593 aaKnown RBP5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 RFLNBQ8N5W9 214 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 LY6G5BQ8NDX9 201 aa5.05□□□□□ -1.6
CCDC144A-212ENST00000470068 TRAV8-4A0A0B4J246 113 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 TCRAP04437 139 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 PSG3Q16557 428 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 CR1LQ2VPA4 569 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 LGALS9BQ3B8N2 356 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 LGALS9CQ6DKI2 356 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 SIGLEC15Q6ZMC9 328 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 SHANK2-AS3Q9BTD1 123 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 SEPSECSQ9HD40 501 aaKnown RBP5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 KLF12Q9Y4X4 402 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 NUP205Q92621 2012 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 TRAV41A0A0B4J266 112 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 A0A1W2PRD5 423 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 A0A1W2PRF3 423 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 A0A1W2PRM7 423 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 INSP01308 110 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 IGFBP2P18065 325 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 ALKBH6Q3KRA9 238 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 GAGE13Q4V321 117 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 HIST3H2BBQ8N257 126 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 DUX3Q96PT4 197 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 NOTCH1P46531 2555 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 C17orf98A8MV24 154 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 TSPAN13O95857 204 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 CCL2P13500 99 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 IGFBP6P24592 240 aaPredicted RBP5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 RPL32P62910 135 aaKnown RBP5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 PYY3Q5JQD4 70 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 TMEM170BQ5T4T1 132 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 ZNF562Q6V9R5 426 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 Q6ZS92 163 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 BRCA1P38398 1863 aaKnown RBP5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 DOCK5Q9H7D0 1870 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 CENPVL1A0A0U1RR11 272 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 TMEM178BH3BS89 294 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 ATP5G1P05496 136 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 SAA2P0DJI9 122 aaPredicted RBP5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 ATP5G3P48201 142 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 ZNF137PP52743 207 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 HERV-K104P63124 156 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 C5orf64Q2M2E5 130 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 TEX36Q5VZQ5 186 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 TREML4Q6UXN2 200 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 GTSCR1Q86UQ5 136 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 STHQ8IWL8 128 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 DMRTC2Q8IXT2 367 aaPredicted RBP5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 MRPL20Q9BYC9 149 aaKnown RBP5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 SIGLEC9Q9Y336 463 aa5.04□□□□□ -1.6
CCDC144A-212ENST00000470068 IGHV3OR15-7A0A075B7D8 119 aa5.03□□□□□ -1.6
CCDC144A-212ENST00000470068 F8W1H4 67 aa5.03□□□□□ -1.6
CCDC144A-212ENST00000470068 CCL25O15444 150 aa5.03□□□□□ -1.6
CCDC144A-212ENST00000470068 PLXNA3P51805 1871 aa5.03□□□□□ -1.6
CCDC144A-212ENST00000470068 THAP8Q8NA92 274 aa5.03□□□□□ -1.6
CCDC144A-212ENST00000470068 OR13C6PQ8NH95 151 aa5.03□□□□□ -1.6
CCDC144A-212ENST00000470068 REG4Q9BYZ8 158 aa5.03□□□□□ -1.6
CCDC144A-212ENST00000470068 CYTL1Q9NRR1 136 aa5.03□□□□□ -1.6
CCDC144A-212ENST00000470068 COLCA2A8K830 154 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms