RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 H7C1C5 153 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 C19orf84I3L1E1 186 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 BANF1O75531 89 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 NDUFC2O95298 119 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 IL9P15248 144 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 PIGPP57054 158 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 LCN6P62502 163 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 TMEM128Q5BJH2 165 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.12□□□□□ -2.23
VPS8-220ENST00000469713 HIST3H2BBQ8N257 126 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 SIGLECL1Q8N7X8 197 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 TMEM35BQ8NCS4 154 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 OR4E2Q8NGC2 313 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 OR4D11Q8NGI4 311 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 MAFIPQ8WZ33 124 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 ADAT3Q96EY9 351 aaPredicted RBP1.12□□□□□ -2.23
VPS8-220ENST00000469713 ZC2HC1AQ96GY0 325 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 CARD19Q96LW7 228 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 PBDC1Q9BVG4 233 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 FAM107BQ9H098 131 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 TMEM133Q9H2Q1 129 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 LRTM1Q9HBL6 345 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 MED11Q9P086 117 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 GINS2Q9Y248 185 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 ABCA2Q9BZC7 2435 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 NUP210LQ5VU65 1888 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 PTPN13Q12923 2485 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 DLG5Q8TDM6 1919 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 ANAPC1Q9H1A4 1944 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 XIRP1Q702N8 1843 aaKnown RBP1.11□□□□□ -2.23
VPS8-220ENST00000469713 GPR98Q8WXG9 6306 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 IGKV1-9A0A0C4DH69 117 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 PRORSD1PA6NEY8 169 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 C1orf196B1AJZ1 125 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 CST8O60676 142 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 DHFRP00374 187 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 ASAH2BP0C7U1 165 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 RAB4BP61018 213 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 S100A12P80511 92 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 STAG3L4Q8TBR4 150 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 WFDC5Q8TCV5 224 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 EFCAB11Q9BUY7 163 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 PCTPQ9UKL6 214 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 TENM1Q9UKZ4 2725 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 ALPK2Q86TB3 2170 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 DENND4CQ5VZ89 1909 aa1.11□□□□□ -2.23
VPS8-220ENST00000469713 ARHGEF10O15013 1369 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 RIC1Q4ADV7 1423 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 FMN1Q68DA7 1419 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 YTHDC2Q9H6S0 1430 aaKnown RBP1.1□□□□□ -2.23
VPS8-220ENST00000469713 TRAV1-1A0A0B4J248 108 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 RIIAD1A6NNX1 92 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 IFNA7P01567 189 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 HMGN1P05114 100 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 RPL7P18124 248 aaKnown RBP1.1□□□□□ -2.23
VPS8-220ENST00000469713 CASP1P29466 404 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 INSL3P51460 131 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 PSPHP78330 225 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 PLCXD2Q0VAA5 305 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 SAMD13Q5VXD3 122 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 PLEKHB2Q96CS7 222 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 AIF1LQ9BQI0 150 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 HSPB11Q9Y547 144 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 ASB4Q9Y574 426 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 UBR2Q8IWV8 1755 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 DOCK4Q8N1I0 1966 aa1.1□□□□□ -2.23
VPS8-220ENST00000469713 USP9XQ93008 2570 aaPredicted RBP1.09□□□□□ -2.23
VPS8-220ENST00000469713 CHD8Q9HCK8 2581 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 CPDO75976 1380 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 MED1Q15648 1581 aaPredicted RBP1.09□□□□□ -2.23
VPS8-220ENST00000469713 N4BP2Q86UW6 1770 aaPredicted RBP1.09□□□□□ -2.23
VPS8-220ENST00000469713 MYH10P35580 1976 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 DUXBA0A1W2PPF3 345 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 J3QRK9 145 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 M0R378 163 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 AIPO00170 330 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 KPNA4O00629 521 aaPredicted RBP1.09□□□□□ -2.23
VPS8-220ENST00000469713 TAX1BP3O14907 124 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 OR2T1O43869 369 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 SCGB1A1P11684 91 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 COX6A1P12074 109 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 RPS3P23396 243 aaKnown RBP eCLIP1.09□□□□□ -2.23
VPS8-220ENST00000469713 RNASE4P34096 147 aaKnown RBP1.09□□□□□ -2.23
VPS8-220ENST00000469713 YPEL3P61236 119 aaPredicted RBP1.09□□□□□ -2.23
VPS8-220ENST00000469713 SMCO1Q147U7 214 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 HRCT1Q6UXD1 115 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 LINC00311Q8N616 119 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 SLAMF6Q96DU3 332 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 MALSU1Q96EH3 234 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 CCDC115Q96NT0 180 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 GPX7Q96SL4 187 aaPredicted RBP1.09□□□□□ -2.23
VPS8-220ENST00000469713 PBOV1Q9GZY1 135 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 OSTCQ9NRP0 149 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 GSKIPQ9P0R6 139 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 JPT1Q9UK76 154 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 OR52A1Q9UKL2 312 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 SNURFQ9Y675 71 aa1.09□□□□□ -2.23
VPS8-220ENST00000469713 UBR4Q5T4S7 5183 aa1.09□□□□□ -2.24
VPS8-220ENST00000469713 CEP152O94986 1710 aa1.09□□□□□ -2.24
VPS8-220ENST00000469713 NOTCH1P46531 2555 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms