RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 MT-ND6P03923 174 aa11.62□□□□□ -0.55
CBWD3-205ENST00000469687 SRIP30626 198 aa11.62□□□□□ -0.55
CBWD3-205ENST00000469687 UCNP55089 124 aa11.62□□□□□ -0.55
CBWD3-205ENST00000469687 LURAP1LQ8IV03 231 aa11.62□□□□□ -0.55
CBWD3-205ENST00000469687 TIMD4Q96H15 378 aa11.62□□□□□ -0.55
CBWD3-205ENST00000469687 RASL11BQ9BPW5 248 aa11.62□□□□□ -0.55
CBWD3-205ENST00000469687 SLC25A39Q9BZJ4 359 aaPredicted RBP11.62□□□□□ -0.55
CBWD3-205ENST00000469687 LOC105371242A0A075B767 164 aa11.62□□□□□ -0.55
CBWD3-205ENST00000469687 A6NNC1 897 aa11.62□□□□□ -0.55
CBWD3-205ENST00000469687 NBR2O15453 112 aa11.62□□□□□ -0.55
CBWD3-205ENST00000469687 NEU1Q99519 415 aa11.62□□□□□ -0.55
CBWD3-205ENST00000469687 ZNF586Q9NXT0 402 aa11.62□□□□□ -0.55
CBWD3-205ENST00000469687 KLF12Q9Y4X4 402 aa11.62□□□□□ -0.55
CBWD3-205ENST00000469687 TRAV8-1A0A0A6YYK1 113 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 NDUFS7O75251 213 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 NHLH1Q02575 133 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 TDRG1Q3Y452 100 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 DYNAPQ8N1N2 210 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 EXOC3-AS1Q8N2X6 119 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 GRAMD2BQ96HH9 432 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 NOL4LQ96MY1 436 aaPredicted RBP11.61□□□□□ -0.55
CBWD3-205ENST00000469687 TBX15Q96SF7 602 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 RNF5Q99942 180 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 ATG101Q9BSB4 218 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 SAMD10Q9BYL1 202 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 HIGD1CA8MV81 97 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 ZNF705FA8MVS1 300 aaPredicted RBP11.61□□□□□ -0.55
CBWD3-205ENST00000469687 ODF3BA8MYP8 253 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 HLA-DQA1P01909 254 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 TCRAP04437 139 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 ZNF705DP0CH99 300 aaPredicted RBP11.61□□□□□ -0.55
CBWD3-205ENST00000469687 ZNF705BP0CI00 300 aaPredicted RBP11.61□□□□□ -0.55
CBWD3-205ENST00000469687 PAFAH1B2P68402 229 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 RPL19P84098 196 aaKnown RBP11.61□□□□□ -0.55
CBWD3-205ENST00000469687 HES1Q14469 280 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 USF2Q15853 346 aaPredicted RBP11.61□□□□□ -0.55
CBWD3-205ENST00000469687 C5orf17Q8NAS9 161 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 GPR82Q96P67 336 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 MLST8Q9BVC4 326 aa11.61□□□□□ -0.55
CBWD3-205ENST00000469687 ZNF253O75346 499 aa11.6□□□□□ -0.55
CBWD3-205ENST00000469687 APCSP02743 223 aa11.6□□□□□ -0.55
CBWD3-205ENST00000469687 TOMM20LQ6UXN7 152 aa11.6□□□□□ -0.55
CBWD3-205ENST00000469687 KIR3DL3Q8N743 410 aa11.6□□□□□ -0.55
CBWD3-205ENST00000469687 TMEM68Q96MH6 324 aa11.6□□□□□ -0.55
CBWD3-205ENST00000469687 C17orf77Q96MU5 243 aa11.6□□□□□ -0.55
CBWD3-205ENST00000469687 ZNF331Q9NQX6 463 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-205ENST00000469687 TCF24Q7RTU0 167 aa11.6□□□□□ -0.55
CBWD3-205ENST00000469687 BCL6BQ8N143 479 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-205ENST00000469687 SSBP4Q9BWG4 385 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-205ENST00000469687 MRPL27Q9P0M9 148 aaKnown RBP11.6□□□□□ -0.55
CBWD3-205ENST00000469687 FBXL7Q9UJT9 491 aa11.6□□□□□ -0.55
CBWD3-205ENST00000469687 NDUFA3O95167 84 aa11.59□□□□□ -0.55
CBWD3-205ENST00000469687 LTAP01374 205 aa11.59□□□□□ -0.55
CBWD3-205ENST00000469687 PRTN3P24158 256 aa11.59□□□□□ -0.55
CBWD3-205ENST00000469687 ZFP36P26651 326 aaKnown RBP11.59□□□□□ -0.55
CBWD3-205ENST00000469687 NDPQ00604 133 aa11.59□□□□□ -0.55
CBWD3-205ENST00000469687 TSKUQ8WUA8 353 aa11.59□□□□□ -0.55
CBWD3-205ENST00000469687 RBM14Q96PK6 669 aaKnown RBP11.59□□□□□ -0.55
CBWD3-205ENST00000469687 ASCL2Q99929 193 aa11.59□□□□□ -0.55
CBWD3-205ENST00000469687 NDUFAF3Q9BU61 184 aa11.59□□□□□ -0.55
CBWD3-205ENST00000469687 ITPR1Q14643 2758 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 A0A1B0GV90 55 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 A0A1W2PS18 150 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 TOMM40O96008 361 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 GPX1P07203 203 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 HIST1H1EP10412 219 aaKnown RBP11.58□□□□□ -0.56
CBWD3-205ENST00000469687 BRS3P32247 399 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 GPR6P46095 362 aaPredicted RBP11.58□□□□□ -0.56
CBWD3-205ENST00000469687 LY6DQ14210 128 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 COX19Q49B96 90 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 OR10J3Q5JRS4 329 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 VMO1Q7Z5L0 202 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 NPBQ8NG41 125 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 TBL2Q9Y4P3 447 aaKnown RBP11.58□□□□□ -0.56
CBWD3-205ENST00000469687 M0R1W7 72 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 PMCHP20382 165 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 CAMPP49913 170 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 C1orf194Q5T5A4 169 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 VN1R17PQ8TDU5 208 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 WIPF2Q8TF74 440 aaPredicted RBP11.58□□□□□ -0.56
CBWD3-205ENST00000469687 NEU4Q8WWR8 484 aaPredicted RBP11.58□□□□□ -0.56
CBWD3-205ENST00000469687 FMC1Q96HJ9 113 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 KCNS1Q96KK3 526 aa11.58□□□□□ -0.56
CBWD3-205ENST00000469687 KIR2DL5BA0A0G2JN68 375 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 KIR2DL5BA0A0G2JPC4 375 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 AMTP48728 403 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 C5orf64Q2M2E5 130 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 KIR2DL5AQ8N109 375 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 CIARTQ8N365 385 aaPredicted RBP11.57□□□□□ -0.56
CBWD3-205ENST00000469687 SIGLECL1Q8N7X8 197 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 GTSF1Q8WW33 167 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 SRSF8Q9BRL6 282 aaKnown RBP11.57□□□□□ -0.56
CBWD3-205ENST00000469687 CELSR1Q9NYQ6 3014 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 CACNA1BQ00975 2339 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 IGLV2-11P01706 119 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 CEACAM3P40198 252 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 GOLT1AQ6ZVE7 132 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 FAM19A2Q8N3H0 131 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 ZNF491Q8N8L2 437 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 C18orf32Q8TCD1 76 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms